RNA–Protein interactions for RNA: YBR278W

DPB3, Transcript of Third-largest subunit of DNA polymerase II (DNA polymerase epsilon), yeastyeast

Gene DPB3, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DPB3YBR278W ICE2P40499 491 aa2.09□□□□□ -2.07
DPB3YBR278W YIP3P53633 176 aa2.09□□□□□ -2.07
DPB3YBR278W TIM9O74700 87 aa2.08□□□□□ -2.08
DPB3YBR278W SNF4P12904 322 aa2.08□□□□□ -2.08
DPB3YBR278W PET9P18239 318 aaKnown RBP2.08□□□□□ -2.08
DPB3YBR278W TAH1P25638 111 aaPredicted RBP2.08□□□□□ -2.08
DPB3YBR278W PEX4P29340 183 aa2.08□□□□□ -2.08
DPB3YBR278W TRR1P29509 319 aaKnown RBP2.08□□□□□ -2.08
DPB3YBR278W MRPL17P36528 281 aa2.08□□□□□ -2.08
DPB3YBR278W CIS3P47001 227 aa2.08□□□□□ -2.08
DPB3YBR278W YGR219WP53307 113 aa2.08□□□□□ -2.08
DPB3YBR278W YLR460CP54007 376 aa2.08□□□□□ -2.08
DPB3YBR278W DAD3P69850 94 aa2.08□□□□□ -2.08
DPB3YBR278W PRM15Q03262 622 aa2.08□□□□□ -2.08
DPB3YBR278W FUS2Q05670 677 aa2.08□□□□□ -2.08
DPB3YBR278W ATO3Q12359 275 aa2.08□□□□□ -2.08
DPB3YBR278W CKS1P20486 150 aaKnown RBP2.07□□□□□ -2.08
DPB3YBR278W ATP15P21306 62 aa2.07□□□□□ -2.08
DPB3YBR278W MRPS28P21771 286 aa2.07□□□□□ -2.08
DPB3YBR278W RAD51P25454 400 aa2.07□□□□□ -2.08
DPB3YBR278W OCH1P31755 480 aa2.07□□□□□ -2.08
DPB3YBR278W RME1P32338 300 aaKnown RBP2.07□□□□□ -2.08
DPB3YBR278W FMP23P38231 175 aa2.07□□□□□ -2.08
DPB3YBR278W RPL33BP41056 107 aaKnown RBP2.07□□□□□ -2.08
DPB3YBR278W SKI6P46948 246 aaPredicted RBP2.07□□□□□ -2.08
DPB3YBR278W ARP3P47117 449 aaKnown RBP2.07□□□□□ -2.08
DPB3YBR278W RGM1Q00453 211 aa2.07□□□□□ -2.08
DPB3YBR278W MRPS8Q03799 155 aa2.07□□□□□ -2.08
DPB3YBR278W HNT1Q04344 158 aaKnown RBP2.07□□□□□ -2.08
DPB3YBR278W MEU1Q07938 337 aaKnown RBP RIP-Chip data2.07□□□□□ -2.08not detected
DPB3YBR278W TRX3P25372 127 aa2.06□□□□□ -2.08
DPB3YBR278W VPS51P36116 164 aa2.06□□□□□ -2.08
DPB3YBR278W MAK5P38112 773 aaPredicted RBP2.06□□□□□ -2.08
DPB3YBR278W SRP14P38985 146 aa2.06□□□□□ -2.08
DPB3YBR278W DOC1P53068 250 aa2.06□□□□□ -2.08
DPB3YBR278W ARO8P53090 500 aaKnown RBP2.06□□□□□ -2.08
DPB3YBR278W JAC1P53193 184 aa2.06□□□□□ -2.08
DPB3YBR278W CGI121Q03705 181 aaKnown RBP2.06□□□□□ -2.08
DPB3YBR278W SMD2Q06217 110 aaKnown RBP2.06□□□□□ -2.08
DPB3YBR278W RIO1Q12196 484 aaKnown RBP2.06□□□□□ -2.08
DPB3YBR278W YDL085C-AQ3E7B7 68 aaKnown RBP2.06□□□□□ -2.08
DPB3YBR278W SCL1P21243 252 aaKnown RBP2.05□□□□□ -2.08
DPB3YBR278W CLG1P35190 452 aa2.05□□□□□ -2.08
DPB3YBR278W YKR041WP36134 250 aa2.05□□□□□ -2.08
DPB3YBR278W PHO88P38264 188 aaPredicted RBP2.05□□□□□ -2.08
DPB3YBR278W OPY1P38271 328 aa2.05□□□□□ -2.08
DPB3YBR278W UMP1P38293 148 aa2.05□□□□□ -2.08
DPB3YBR278W GVP36P40531 326 aaKnown RBP2.05□□□□□ -2.08
DPB3YBR278W YNL247WP53852 767 aaKnown RBP2.05□□□□□ -2.08
DPB3YBR278W YMR315WQ04869 349 aaKnown RBP2.05□□□□□ -2.08
DPB3YBR278W BRX1Q08235 291 aaKnown RBP2.05□□□□□ -2.08
DPB3YBR278W YOR283WQ12040 230 aaKnown RBP2.05□□□□□ -2.08
DPB3YBR278W YCR090CP25654 182 aaKnown RBP2.04□□□□□ -2.08
DPB3YBR278W ARO7P32178 256 aa2.04□□□□□ -2.08
DPB3YBR278W ARC19P33204 171 aaKnown RBP2.04□□□□□ -2.08
DPB3YBR278W SNC2P33328 115 aa2.04□□□□□ -2.08
DPB3YBR278W ERV15P38312 142 aa2.04□□□□□ -2.08
DPB3YBR278W YER076CP40049 302 aa2.04□□□□□ -2.08
DPB3YBR278W YKE4P40544 346 aa2.04□□□□□ -2.08
DPB3YBR278W YNR062CP53748 327 aa2.04□□□□□ -2.08
DPB3YBR278W YNL140CP53910 189 aa2.04□□□□□ -2.08
DPB3YBR278W YLR031WQ07978 186 aa2.04□□□□□ -2.08
DPB3YBR278W PDR18P53756 1333 aa2.03□□□□□ -2.08
DPB3YBR278W MGT1P26188 188 aa2.03□□□□□ -2.08
DPB3YBR278W YBR285WP38354 144 aa2.03□□□□□ -2.08
DPB3YBR278W NVJ1P38881 321 aa2.03□□□□□ -2.08
DPB3YBR278W FMP32P43557 207 aa2.03□□□□□ -2.08
DPB3YBR278W YJL027CP47063 138 aaPredicted RBP2.03□□□□□ -2.08
DPB3YBR278W YJR111CP47148 283 aaKnown RBP2.03□□□□□ -2.08
DPB3YBR278W DAN1P47178 298 aa2.03□□□□□ -2.08
DPB3YBR278W BOL2P53082 120 aa2.03□□□□□ -2.08
DPB3YBR278W YNR077CP53758 84 aa2.03□□□□□ -2.08
DPB3YBR278W YDR274CP87283 123 aa2.03□□□□□ -2.08
DPB3YBR278W AIM34Q03673 198 aa2.03□□□□□ -2.08
DPB3YBR278W DGA1Q08650 418 aa2.03□□□□□ -2.08
DPB3YBR278W RAS2P01120 322 aaKnown RBP2.02□□□□□ -2.09
DPB3YBR278W YET1P35723 206 aa2.02□□□□□ -2.09
DPB3YBR278W PAN3P36102 679 aaPredicted RBP2.02□□□□□ -2.09
DPB3YBR278W AIM2P39721 246 aa2.02□□□□□ -2.09
DPB3YBR278W LSM4P40070 187 aaKnown RBP2.02□□□□□ -2.09
DPB3YBR278W SER2P42941 309 aa2.02□□□□□ -2.09
DPB3YBR278W EAF6P47128 113 aa2.02□□□□□ -2.09
DPB3YBR278W FSF1Q12029 327 aaKnown RBP2.02□□□□□ -2.09
DPB3YBR278W ODC2Q99297 307 aa2.02□□□□□ -2.09
DPB3YBR278W RPS24AP0CX31 135 aaKnown RBP2.01□□□□□ -2.09
DPB3YBR278W RPS24BP0CX32 135 aaKnown RBP2.01□□□□□ -2.09
DPB3YBR278W SVP26P38869 228 aa2.01□□□□□ -2.09
DPB3YBR278W YEA4P40004 342 aa2.01□□□□□ -2.09
DPB3YBR278W YER121WP40076 114 aa2.01□□□□□ -2.09
DPB3YBR278W YER134CP40081 178 aa2.01□□□□□ -2.09
DPB3YBR278W TIR3P40552 269 aa2.01□□□□□ -2.09
DPB3YBR278W TMA22P47089 198 aaPredicted RBP2.01□□□□□ -2.09
DPB3YBR278W NUP49Q02199 472 aa2.01□□□□□ -2.09
DPB3YBR278W HPT1Q04178 221 aaKnown RBP2.01□□□□□ -2.09
DPB3YBR278W DYN3Q04949 312 aa2.01□□□□□ -2.09
DPB3YBR278W SHH4Q06236 168 aa2.01□□□□□ -2.09
DPB3YBR278W CPA1P07258 411 aaKnown RBP2□□□□□ -2.09
DPB3YBR278W AHC2P25649 128 aa2□□□□□ -2.09
DPB3YBR278W KDX1P36005 433 aa2□□□□□ -2.09
DPB3YBR278W FES1P38260 290 aa2□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms