RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 CLDN10P78369 228 aa18.52■□□□□ 0.56
PHGDH-234ENST00000642041 LAMTOR4Q0VGL1 99 aa18.52■□□□□ 0.56
PHGDH-234ENST00000642041 PUM1Q14671 1186 aaKnown RBP eCLIP18.52■□□□□ 0.56
PHGDH-234ENST00000642041 PSMD6Q15008 389 aa18.52■□□□□ 0.56
PHGDH-234ENST00000642041 IFI16Q16666 785 aaKnown RBP18.52■□□□□ 0.56
PHGDH-234ENST00000642041 EFCAB12Q6NXP0 572 aa18.52■□□□□ 0.56
PHGDH-234ENST00000642041 TRIM65Q6PJ69 517 aa18.52■□□□□ 0.56
PHGDH-234ENST00000642041 WDR59Q6PJI9 974 aa18.52■□□□□ 0.56
PHGDH-234ENST00000642041 RAD9BQ6WBX8 426 aa18.52■□□□□ 0.56
PHGDH-234ENST00000642041 KIAA1328Q86T90 577 aa18.52■□□□□ 0.56
PHGDH-234ENST00000642041 RNF10Q8N5U6 811 aaKnown RBP18.52■□□□□ 0.56
PHGDH-234ENST00000642041 BSNDQ8WZ55 320 aa18.52■□□□□ 0.56
PHGDH-234ENST00000642041 CBWD1Q9BRT8 395 aa18.52■□□□□ 0.56
PHGDH-234ENST00000642041 GANQ9H2C0 597 aa18.52■□□□□ 0.56
PHGDH-234ENST00000642041 POLD4Q9HCU8 107 aa18.52■□□□□ 0.56
PHGDH-234ENST00000642041 FRYLO94915 3013 aa18.52■□□□□ 0.55
PHGDH-234ENST00000642041 LRRC53A6NM62 1247 aa18.51■□□□□ 0.55
PHGDH-234ENST00000642041 NOL4O94818 638 aa18.51■□□□□ 0.55
PHGDH-234ENST00000642041 CASQ1P31415 396 aa18.51■□□□□ 0.55
PHGDH-234ENST00000642041 PTENP60484 403 aa18.51■□□□□ 0.55
PHGDH-234ENST00000642041 KLHL30Q0D2K2 578 aa18.51■□□□□ 0.55
PHGDH-234ENST00000642041 FAM26DQ5JW98 314 aa18.51■□□□□ 0.55
PHGDH-234ENST00000642041 PPP1R2P3Q6NXS1 205 aa18.51■□□□□ 0.55
PHGDH-234ENST00000642041 SRGAP1Q7Z6B7 1085 aa18.51■□□□□ 0.55
PHGDH-234ENST00000642041 POF1BQ8WVV4 589 aa18.51■□□□□ 0.55
PHGDH-234ENST00000642041 SH2D3AQ9BRG2 576 aa18.51■□□□□ 0.55
PHGDH-234ENST00000642041 TLE6Q9H808 572 aa18.51■□□□□ 0.55
PHGDH-234ENST00000642041 INTUQ9ULD6 942 aa18.51■□□□□ 0.55
PHGDH-234ENST00000642041 PCDHGC5Q9Y5F6 944 aa18.51■□□□□ 0.55
PHGDH-234ENST00000642041 ZFHX4Q86UP3 3567 aa18.51■□□□□ 0.55
PHGDH-234ENST00000642041 A0A0B4J269 797 aa18.5■□□□□ 0.55
PHGDH-234ENST00000642041 DGKIO75912 1065 aa18.5■□□□□ 0.55
PHGDH-234ENST00000642041 INSRRP14616 1297 aa18.5■□□□□ 0.55
PHGDH-234ENST00000642041 ADSSP30520 456 aa18.5■□□□□ 0.55
PHGDH-234ENST00000642041 GPC3P51654 580 aa18.5■□□□□ 0.55
PHGDH-234ENST00000642041 CLCN5P51795 746 aa18.5■□□□□ 0.55
PHGDH-234ENST00000642041 VAV2P52735 878 aa18.5■□□□□ 0.55
PHGDH-234ENST00000642041 MFAP3P55082 362 aa18.5■□□□□ 0.55
PHGDH-234ENST00000642041 CYP24A1Q07973 514 aa18.5■□□□□ 0.55
PHGDH-234ENST00000642041 MTMR3Q13615 1198 aa18.5■□□□□ 0.55
PHGDH-234ENST00000642041 CAPSQ13938 189 aa18.5■□□□□ 0.55
PHGDH-234ENST00000642041 BMS1Q14692 1282 aaKnown RBP18.5■□□□□ 0.55
PHGDH-234ENST00000642041 GRIK4Q16099 956 aa18.5■□□□□ 0.55
PHGDH-234ENST00000642041 NME8Q8N427 588 aa18.5■□□□□ 0.55
PHGDH-234ENST00000642041 KLHL23Q8NBE8 558 aa18.5■□□□□ 0.55
PHGDH-234ENST00000642041 FBXL13Q8NEE6 735 aa18.5■□□□□ 0.55
PHGDH-234ENST00000642041 ASAP3Q8TDY4 903 aa18.5■□□□□ 0.55
PHGDH-234ENST00000642041 FZD8Q9H461 694 aa18.5■□□□□ 0.55
PHGDH-234ENST00000642041 RNPEPQ9H4A4 650 aa18.5■□□□□ 0.55
PHGDH-234ENST00000642041 PCIF1Q9H4Z3 704 aa18.5■□□□□ 0.55
PHGDH-234ENST00000642041 SORCS3Q9UPU3 1222 aa18.5■□□□□ 0.55
PHGDH-234ENST00000642041 CFAP47Q6ZTR5 3102 aa18.5■□□□□ 0.55
PHGDH-234ENST00000642041 ENPP3O14638 875 aa18.49■□□□□ 0.55
PHGDH-234ENST00000642041 C22orf31O95567 290 aa18.49■□□□□ 0.55
PHGDH-234ENST00000642041 SMIM10L2AP0DMW4 78 aa18.49■□□□□ 0.55
PHGDH-234ENST00000642041 SMIM10L2BP0DMW5 78 aa18.49■□□□□ 0.55
PHGDH-234ENST00000642041 KLRC1P26715 233 aa18.49■□□□□ 0.55
PHGDH-234ENST00000642041 MATR3P43243 847 aaKnown RBP eCLIP18.49■□□□□ 0.55
PHGDH-234ENST00000642041 BPIFB4P59827 614 aa18.49■□□□□ 0.55
PHGDH-234ENST00000642041 RAPGEF1Q13905 1077 aa18.49■□□□□ 0.55
PHGDH-234ENST00000642041 TDRD12Q587J7 1177 aaKnown RBP18.49■□□□□ 0.55
PHGDH-234ENST00000642041 WDR44Q5JSH3 913 aa18.49■□□□□ 0.55
PHGDH-234ENST00000642041 TSHZ1Q6ZSZ6 1077 aa18.49■□□□□ 0.55
PHGDH-234ENST00000642041 FAM43BQ6ZT52 329 aaPredicted RBP18.49■□□□□ 0.55
PHGDH-234ENST00000642041 TOGARAM2Q6ZUX3 1019 aa18.49■□□□□ 0.55
PHGDH-234ENST00000642041 KSR1Q8IVT5 923 aa18.49■□□□□ 0.55
PHGDH-234ENST00000642041 RNF149Q8NC42 400 aa18.49■□□□□ 0.55
PHGDH-234ENST00000642041 TSPAN18Q96SJ8 248 aa18.49■□□□□ 0.55
PHGDH-234ENST00000642041 CHP1Q99653 195 aa18.49■□□□□ 0.55
PHGDH-234ENST00000642041 CRACR2AQ9BSW2 395 aa18.49■□□□□ 0.55
PHGDH-234ENST00000642041 MSTO1Q9BUK6 570 aa18.49■□□□□ 0.55
PHGDH-234ENST00000642041 INTS2Q9H0H0 1204 aaKnown RBP18.49■□□□□ 0.55
PHGDH-234ENST00000642041 FAM124BQ9H5Z6 455 aaPredicted RBP18.49■□□□□ 0.55
PHGDH-234ENST00000642041 R3HCC1Q9Y3T6 440 aaKnown RBP18.49■□□□□ 0.55
PHGDH-234ENST00000642041 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.49■□□□□ 0.55
PHGDH-234ENST00000642041 MRPL42Q9Y6G3 142 aaKnown RBP18.49■□□□□ 0.55
PHGDH-234ENST00000642041 ZBTB42B2RXF5 422 aa18.48■□□□□ 0.55
PHGDH-234ENST00000642041 ANKRD63C9JTQ0 380 aa18.48■□□□□ 0.55
PHGDH-234ENST00000642041 RNF225M0QZC1 329 aaPredicted RBP18.48■□□□□ 0.55
PHGDH-234ENST00000642041 OGTO15294 1046 aa18.48■□□□□ 0.55
PHGDH-234ENST00000642041 PRKCBP05771 671 aa18.48■□□□□ 0.55
PHGDH-234ENST00000642041 SLC9A1P19634 815 aa18.48■□□□□ 0.55
PHGDH-234ENST00000642041 KIF11P52732 1056 aa18.48■□□□□ 0.55
PHGDH-234ENST00000642041 GNG11P61952 73 aa18.48■□□□□ 0.55
PHGDH-234ENST00000642041 IGBP1P78318 339 aa18.48■□□□□ 0.55
PHGDH-234ENST00000642041 GOLGA8FQ08AF8 430 aa18.48■□□□□ 0.55
PHGDH-234ENST00000642041 GOLGA8DPQ0D2H9 430 aa18.48■□□□□ 0.55
PHGDH-234ENST00000642041 SLC18A3Q16572 532 aa18.48■□□□□ 0.55
PHGDH-234ENST00000642041 MTHFD1LQ6UB35 978 aa18.48■□□□□ 0.55
PHGDH-234ENST00000642041 NT5DC4Q86YG4 428 aa18.48■□□□□ 0.55
PHGDH-234ENST00000642041 CD302Q8IX05 232 aa18.48■□□□□ 0.55
PHGDH-234ENST00000642041 METTL13Q8N6R0 699 aa18.48■□□□□ 0.55
PHGDH-234ENST00000642041 RDH13Q8NBN7 331 aa18.48■□□□□ 0.55
PHGDH-234ENST00000642041 MYRIPQ8NFW9 859 aa18.48■□□□□ 0.55
PHGDH-234ENST00000642041 TAF4BQ92750 862 aa18.48■□□□□ 0.55
PHGDH-234ENST00000642041 NT5C1BQ96P26 610 aa18.48■□□□□ 0.55
PHGDH-234ENST00000642041 TCHPQ9BT92 498 aa18.48■□□□□ 0.55
PHGDH-234ENST00000642041 CCDC113Q9H0I3 377 aa18.48■□□□□ 0.55
PHGDH-234ENST00000642041 S1PR5Q9H228 398 aa18.48■□□□□ 0.55
PHGDH-234ENST00000642041 NLRC4Q9NPP4 1024 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms