RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 C1QL1O75973 258 aa12.12□□□□□ -0.47
PTP4A1-207ENST00000639568 P4HBP07237 508 aaKnown RBP12.12□□□□□ -0.47
PTP4A1-207ENST00000639568 IGFBP6P24592 240 aaPredicted RBP12.12□□□□□ -0.47
PTP4A1-207ENST00000639568 DPP6P42658 865 aa12.12□□□□□ -0.47
PTP4A1-207ENST00000639568 BRCC3P46736 316 aa12.12□□□□□ -0.47
PTP4A1-207ENST00000639568 MCM2P49736 904 aa12.12□□□□□ -0.47
PTP4A1-207ENST00000639568 EPHB3P54753 998 aa12.12□□□□□ -0.47
PTP4A1-207ENST00000639568 CACNB1Q02641 598 aaPredicted RBP12.12□□□□□ -0.47
PTP4A1-207ENST00000639568 GFPT1Q06210 699 aaPredicted RBP12.12□□□□□ -0.47
PTP4A1-207ENST00000639568 PSMD2Q13200 908 aa12.12□□□□□ -0.47
PTP4A1-207ENST00000639568 PLD1Q13393 1074 aa12.12□□□□□ -0.47
PTP4A1-207ENST00000639568 UPP1Q16831 310 aa12.12□□□□□ -0.47
PTP4A1-207ENST00000639568 CTXN3Q4LDR2 81 aa12.12□□□□□ -0.47
PTP4A1-207ENST00000639568 STXBP5Q5T5C0 1151 aa12.12□□□□□ -0.47
PTP4A1-207ENST00000639568 B3GNT9Q6UX72 402 aa12.12□□□□□ -0.47
PTP4A1-207ENST00000639568 ADAMTS14Q8WXS8 1223 aa12.12□□□□□ -0.47
PTP4A1-207ENST00000639568 NFKBIZQ9BYH8 718 aa12.12□□□□□ -0.47
PTP4A1-207ENST00000639568 ATXN3LQ9H3M9 355 aa12.12□□□□□ -0.47
PTP4A1-207ENST00000639568 GKN1Q9NS71 199 aa12.12□□□□□ -0.47
PTP4A1-207ENST00000639568 AFF4Q9UHB7 1163 aaKnown RBP12.12□□□□□ -0.47
PTP4A1-207ENST00000639568 MBD1Q9UIS9 605 aaPredicted RBP12.12□□□□□ -0.47
PTP4A1-207ENST00000639568 FBXL5Q9UKA1 691 aa12.12□□□□□ -0.47
PTP4A1-207ENST00000639568 STK24Q9Y6E0 443 aa12.12□□□□□ -0.47
PTP4A1-207ENST00000639568 CFAP46Q8IYW2 2715 aa12.12□□□□□ -0.47
PTP4A1-207ENST00000639568 WDR81Q562E7 1941 aa12.11□□□□□ -0.47
PTP4A1-207ENST00000639568 TNFRSF10BO14763 440 aa12.11□□□□□ -0.47
PTP4A1-207ENST00000639568 SYN3O14994 580 aa12.11□□□□□ -0.47
PTP4A1-207ENST00000639568 N4BP3O15049 544 aa12.11□□□□□ -0.47
PTP4A1-207ENST00000639568 ATXN7O15265 892 aaPredicted RBP12.11□□□□□ -0.47
PTP4A1-207ENST00000639568 FGF19O95750 216 aa12.11□□□□□ -0.47
PTP4A1-207ENST00000639568 CPB1P15086 417 aa12.11□□□□□ -0.47
PTP4A1-207ENST00000639568 BCKDHBP21953 392 aa12.11□□□□□ -0.47
PTP4A1-207ENST00000639568 RUNX3Q13761 415 aa12.11□□□□□ -0.47
PTP4A1-207ENST00000639568 CAPSQ13938 189 aa12.11□□□□□ -0.47
PTP4A1-207ENST00000639568 GPR158Q5T848 1215 aa12.11□□□□□ -0.47
PTP4A1-207ENST00000639568 PPP4R3AQ6IN85 833 aa12.11□□□□□ -0.47
PTP4A1-207ENST00000639568 SLC23A3Q6PIS1 610 aa12.11□□□□□ -0.47
PTP4A1-207ENST00000639568 ARMCX6Q7L4S7 300 aa12.11□□□□□ -0.47
PTP4A1-207ENST00000639568 PNPLA1Q8N8W4 532 aa12.11□□□□□ -0.47
PTP4A1-207ENST00000639568 CCDC26Q8TAB7 109 aa12.11□□□□□ -0.47
PTP4A1-207ENST00000639568 P2RY13Q9BPV8 354 aa12.11□□□□□ -0.47
PTP4A1-207ENST00000639568 ADPGKQ9BRR6 497 aa12.11□□□□□ -0.47
PTP4A1-207ENST00000639568 IGSF5Q9NSI5 407 aa12.11□□□□□ -0.47
PTP4A1-207ENST00000639568 NAP1L2Q9ULW6 460 aaPredicted RBP12.11□□□□□ -0.47
PTP4A1-207ENST00000639568 GDAQ9Y2T3 454 aa12.11□□□□□ -0.47
PTP4A1-207ENST00000639568 TDRD15B5MCY1 1934 aaKnown RBP12.11□□□□□ -0.47
PTP4A1-207ENST00000639568 CACNA1EQ15878 2313 aa12.1□□□□□ -0.47
PTP4A1-207ENST00000639568 MYO18BQ8IUG5 2567 aa12.1□□□□□ -0.47
PTP4A1-207ENST00000639568 EML1O00423 815 aa12.1□□□□□ -0.47
PTP4A1-207ENST00000639568 CAPN9O14815 690 aa12.1□□□□□ -0.47
PTP4A1-207ENST00000639568 ARHGAP6O43182 974 aa12.1□□□□□ -0.47
PTP4A1-207ENST00000639568 FTH1P19P0C7X4 201 aa12.1□□□□□ -0.47
PTP4A1-207ENST00000639568 ABCG1P45844 678 aa12.1□□□□□ -0.47
PTP4A1-207ENST00000639568 ALDH1A3P47895 512 aa12.1□□□□□ -0.47
PTP4A1-207ENST00000639568 GALK1P51570 392 aa12.1□□□□□ -0.47
PTP4A1-207ENST00000639568 CYP4A11Q02928 519 aa12.1□□□□□ -0.47
PTP4A1-207ENST00000639568 GLRA4Q5JXX5 417 aa12.1□□□□□ -0.47
PTP4A1-207ENST00000639568 LMBRD2Q68DH5 695 aaPredicted RBP12.1□□□□□ -0.47
PTP4A1-207ENST00000639568 ANO7Q6IWH7 933 aa12.1□□□□□ -0.47
PTP4A1-207ENST00000639568 ZNF280DQ6N043 979 aa12.1□□□□□ -0.47
PTP4A1-207ENST00000639568 TTC30AQ86WT1 665 aa12.1□□□□□ -0.47
PTP4A1-207ENST00000639568 NOSTRINQ8IVI9 506 aa12.1□□□□□ -0.47
PTP4A1-207ENST00000639568 C4orf19Q8IY42 314 aa12.1□□□□□ -0.47
PTP4A1-207ENST00000639568 ASAP3Q8TDY4 903 aa12.1□□□□□ -0.47
PTP4A1-207ENST00000639568 TBCKQ8TEA7 893 aa12.1□□□□□ -0.47
PTP4A1-207ENST00000639568 CRELD1Q96HD1 420 aa12.1□□□□□ -0.47
PTP4A1-207ENST00000639568 SPACA7Q96KW9 195 aa12.1□□□□□ -0.47
PTP4A1-207ENST00000639568 PRIMPOLQ96LW4 560 aa12.1□□□□□ -0.47
PTP4A1-207ENST00000639568 LXNQ9BS40 222 aa12.1□□□□□ -0.47
PTP4A1-207ENST00000639568 CXCL16Q9H2A7 254 aa12.1□□□□□ -0.47
PTP4A1-207ENST00000639568 PRMT7Q9NVM4 692 aaPredicted RBP12.1□□□□□ -0.47
PTP4A1-207ENST00000639568 SLC6A14Q9UN76 642 aa12.1□□□□□ -0.47
PTP4A1-207ENST00000639568 APOBEC2Q9Y235 224 aaKnown RBP12.1□□□□□ -0.47
PTP4A1-207ENST00000639568 NUB1Q9Y5A7 615 aa12.1□□□□□ -0.47
PTP4A1-207ENST00000639568 ASXL3Q9C0F0 2248 aa12.1□□□□□ -0.47
PTP4A1-207ENST00000639568 A0A087WV48 116 aa12.09□□□□□ -0.47
PTP4A1-207ENST00000639568 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.09□□□□□ -0.47
PTP4A1-207ENST00000639568 CAPN8A6NHC0 703 aa12.09□□□□□ -0.47
PTP4A1-207ENST00000639568 TDP2O95551 362 aa12.09□□□□□ -0.47
PTP4A1-207ENST00000639568 AKAP17AQ02040 695 aaKnown RBP12.09□□□□□ -0.47
PTP4A1-207ENST00000639568 NUCB1Q02818 461 aa12.09□□□□□ -0.47
PTP4A1-207ENST00000639568 LYSMD4Q5XG99 296 aa12.09□□□□□ -0.47
PTP4A1-207ENST00000639568 CD300LGQ6UXG3 332 aa12.09□□□□□ -0.47
PTP4A1-207ENST00000639568 RNF19BQ6ZMZ0 732 aa12.09□□□□□ -0.47
PTP4A1-207ENST00000639568 SCUBE3Q8IX30 993 aa12.09□□□□□ -0.47
PTP4A1-207ENST00000639568 TMEFF1Q8IYR6 380 aa12.09□□□□□ -0.47
PTP4A1-207ENST00000639568 ZNF843Q8N446 348 aa12.09□□□□□ -0.47
PTP4A1-207ENST00000639568 LSM14AQ8ND56 463 aaKnown RBP12.09□□□□□ -0.47
PTP4A1-207ENST00000639568 C3orf58Q8NDZ4 430 aa12.09□□□□□ -0.47
PTP4A1-207ENST00000639568 CCDC148Q8NFR7 591 aa12.09□□□□□ -0.47
PTP4A1-207ENST00000639568 CEP76Q8TAP6 659 aa12.09□□□□□ -0.47
PTP4A1-207ENST00000639568 ETNPPLQ8TBG4 499 aa12.09□□□□□ -0.47
PTP4A1-207ENST00000639568 CCDC43Q96MW1 224 aaKnown RBP12.09□□□□□ -0.47
PTP4A1-207ENST00000639568 C22orf23Q9BZE7 217 aa12.09□□□□□ -0.47
PTP4A1-207ENST00000639568 EBF3Q9H4W6 596 aa12.09□□□□□ -0.47
PTP4A1-207ENST00000639568 ZSWIM4Q9H7M6 989 aa12.09□□□□□ -0.47
PTP4A1-207ENST00000639568 GOLGA2P5Q9HBQ8 144 aa12.09□□□□□ -0.47
PTP4A1-207ENST00000639568 FBRSL1Q9HCM7 1045 aaKnown RBP12.09□□□□□ -0.47
PTP4A1-207ENST00000639568 TMEM74BQ9NUR3 256 aa12.09□□□□□ -0.47
PTP4A1-207ENST00000639568 WRAP73Q9P2S5 460 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms