RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 GANQ9H2C0 597 aa7.03□□□□□ -1.28
RTTN-215ENST00000639487 SEMA4AQ9H3S1 761 aa7.03□□□□□ -1.28
RTTN-215ENST00000639487 GPR27Q9NS67 375 aa7.03□□□□□ -1.28
RTTN-215ENST00000639487 TFIP11Q9UBB9 837 aaKnown RBP7.03□□□□□ -1.28
RTTN-215ENST00000639487 ZKSCAN5Q9Y2L8 839 aa7.03□□□□□ -1.28
RTTN-215ENST00000639487 R3HCC1Q9Y3T6 440 aaKnown RBP7.03□□□□□ -1.28
RTTN-215ENST00000639487 TNFRSF10BO14763 440 aa7.02□□□□□ -1.29
RTTN-215ENST00000639487 LILRB5O75023 590 aa7.02□□□□□ -1.29
RTTN-215ENST00000639487 FBXO21O94952 628 aa7.02□□□□□ -1.29
RTTN-215ENST00000639487 TNNT1P13805 278 aa7.02□□□□□ -1.29
RTTN-215ENST00000639487 MAGEA10P43363 369 aaPredicted RBP7.02□□□□□ -1.29
RTTN-215ENST00000639487 KPNA1P52294 538 aaPredicted RBP7.02□□□□□ -1.29
RTTN-215ENST00000639487 GPR17Q13304 367 aa7.02□□□□□ -1.29
RTTN-215ENST00000639487 ASTE1Q2TB18 679 aaPredicted RBP7.02□□□□□ -1.29
RTTN-215ENST00000639487 PRR16Q569H4 304 aa7.02□□□□□ -1.29
RTTN-215ENST00000639487 DLK2Q6UY11 383 aa7.02□□□□□ -1.29
RTTN-215ENST00000639487 CCDC47Q96A33 483 aaKnown RBP7.02□□□□□ -1.29
RTTN-215ENST00000639487 IGSF21Q96ID5 467 aa7.02□□□□□ -1.29
RTTN-215ENST00000639487 PURBQ96QR8 312 aaKnown RBP7.02□□□□□ -1.29
RTTN-215ENST00000639487 POP1Q99575 1024 aaKnown RBP7.02□□□□□ -1.29
RTTN-215ENST00000639487 ALG13Q9NP73 1137 aaKnown RBP7.02□□□□□ -1.29
RTTN-215ENST00000639487 INTS13Q9NVM9 706 aa7.02□□□□□ -1.29
RTTN-215ENST00000639487 FAM50BQ9Y247 325 aa7.02□□□□□ -1.29
RTTN-215ENST00000639487 IPPQ9Y573 584 aa7.02□□□□□ -1.29
RTTN-215ENST00000639487 NUB1Q9Y5A7 615 aa7.02□□□□□ -1.29
RTTN-215ENST00000639487 E9PAM4 449 aa7.02□□□□□ -1.29
RTTN-215ENST00000639487 PRKCBP05771 671 aa7.02□□□□□ -1.29
RTTN-215ENST00000639487 GZMAP12544 262 aa7.02□□□□□ -1.29
RTTN-215ENST00000639487 FOSBP53539 338 aa7.02□□□□□ -1.29
RTTN-215ENST00000639487 TLE2Q04725 743 aa7.02□□□□□ -1.29
RTTN-215ENST00000639487 FCHO2Q0JRZ9 810 aa7.02□□□□□ -1.29
RTTN-215ENST00000639487 DMC1Q14565 340 aa7.02□□□□□ -1.29
RTTN-215ENST00000639487 INTS6LQ5JSJ4 861 aaKnown RBP7.02□□□□□ -1.29
RTTN-215ENST00000639487 MIIPQ5JXC2 388 aa7.02□□□□□ -1.29
RTTN-215ENST00000639487 ATF7IP2Q5U623 682 aa7.02□□□□□ -1.29
RTTN-215ENST00000639487 RRAGBQ5VZM2 374 aa7.02□□□□□ -1.29
RTTN-215ENST00000639487 FAF2Q96CS3 445 aa7.02□□□□□ -1.29
RTTN-215ENST00000639487 C1orf74Q96LT6 269 aa7.02□□□□□ -1.29
RTTN-215ENST00000639487 DNAJC7Q99615 494 aa7.02□□□□□ -1.29
RTTN-215ENST00000639487 PI4K2AQ9BTU6 479 aa7.02□□□□□ -1.29
RTTN-215ENST00000639487 VN1R3Q9BXE9 311 aa7.02□□□□□ -1.29
RTTN-215ENST00000639487 CNGB3Q9NQW8 809 aa7.02□□□□□ -1.29
RTTN-215ENST00000639487 MTCH2Q9Y6C9 303 aa7.02□□□□□ -1.29
RTTN-215ENST00000639487 TREHO43280 583 aa7.02□□□□□ -1.29
RTTN-215ENST00000639487 MGEA5O60502 916 aa7.02□□□□□ -1.29
RTTN-215ENST00000639487 VNN2O95498 520 aa7.02□□□□□ -1.29
RTTN-215ENST00000639487 ARF4P18085 180 aaPredicted RBP7.02□□□□□ -1.29
RTTN-215ENST00000639487 FKBP3Q00688 224 aaKnown RBP7.02□□□□□ -1.29
RTTN-215ENST00000639487 TBC1D8BQ0IIM8 1120 aa7.02□□□□□ -1.29
RTTN-215ENST00000639487 PTPN14Q15678 1187 aa7.02□□□□□ -1.29
RTTN-215ENST00000639487 NOMO2Q5JPE7 1267 aa7.02□□□□□ -1.29
RTTN-215ENST00000639487 MFSD4BQ5TF39 518 aa7.02□□□□□ -1.29
RTTN-215ENST00000639487 ANKRD54Q6NXT1 300 aa7.02□□□□□ -1.29
RTTN-215ENST00000639487 KCNK18Q7Z418 384 aa7.02□□□□□ -1.29
RTTN-215ENST00000639487 PHF13Q86YI8 300 aaPredicted RBP7.02□□□□□ -1.29
RTTN-215ENST00000639487 CCAR1Q8IX12 1150 aaKnown RBP7.02□□□□□ -1.29
RTTN-215ENST00000639487 PHTF2Q8N3S3 785 aa7.02□□□□□ -1.29
RTTN-215ENST00000639487 ACRBPQ8NEB7 543 aa7.02□□□□□ -1.29
RTTN-215ENST00000639487 SPPL3Q8TCT6 385 aa7.02□□□□□ -1.29
RTTN-215ENST00000639487 PARD3BQ8TEW8 1205 aa7.02□□□□□ -1.29
RTTN-215ENST00000639487 CASKIN2Q8WXE0 1202 aa7.02□□□□□ -1.29
RTTN-215ENST00000639487 SHC3Q92529 594 aa7.02□□□□□ -1.29
RTTN-215ENST00000639487 HSFY1Q96LI6 401 aa7.02□□□□□ -1.29
RTTN-215ENST00000639487 PAIP2Q9BPZ3 127 aaKnown RBP7.02□□□□□ -1.29
RTTN-215ENST00000639487 RNF208Q9H0X6 261 aa7.02□□□□□ -1.29
RTTN-215ENST00000639487 SNTG2Q9NY99 539 aa7.02□□□□□ -1.29
RTTN-215ENST00000639487 GCNT4Q9P109 453 aa7.02□□□□□ -1.29
RTTN-215ENST00000639487 UXTQ9UBK9 157 aaPredicted RBP7.02□□□□□ -1.29
RTTN-215ENST00000639487 PADI3Q9ULW8 664 aa7.02□□□□□ -1.29
RTTN-215ENST00000639487 SCML2Q9UQR0 700 aa7.02□□□□□ -1.29
RTTN-215ENST00000639487 ANKRD62A6NC57 917 aa7.01□□□□□ -1.29
RTTN-215ENST00000639487 CYP2B6P20813 491 aa7.01□□□□□ -1.29
RTTN-215ENST00000639487 ITGB8P26012 769 aa7.01□□□□□ -1.29
RTTN-215ENST00000639487 IFNAR2P48551 515 aa7.01□□□□□ -1.29
RTTN-215ENST00000639487 STARD6P59095 220 aa7.01□□□□□ -1.29
RTTN-215ENST00000639487 PRKCQQ04759 706 aa7.01□□□□□ -1.29
RTTN-215ENST00000639487 SIM2Q14190 667 aaPredicted RBP7.01□□□□□ -1.29
RTTN-215ENST00000639487 CLUL1Q15846 466 aa7.01□□□□□ -1.29
RTTN-215ENST00000639487 GPR149Q86SP6 731 aa7.01□□□□□ -1.29
RTTN-215ENST00000639487 IRF2BP1Q8IU81 584 aa7.01□□□□□ -1.29
RTTN-215ENST00000639487 SMRP1Q8NCR6 262 aa7.01□□□□□ -1.29
RTTN-215ENST00000639487 APPL2Q8NEU8 664 aa7.01□□□□□ -1.29
RTTN-215ENST00000639487 CCDC26Q8TAB7 109 aa7.01□□□□□ -1.29
RTTN-215ENST00000639487 SNX29Q8TEQ0 813 aa7.01□□□□□ -1.29
RTTN-215ENST00000639487 DDX12PQ92771 950 aa7.01□□□□□ -1.29
RTTN-215ENST00000639487 NTAN1Q96AB6 310 aa7.01□□□□□ -1.29
RTTN-215ENST00000639487 DEFB118Q96PH6 123 aa7.01□□□□□ -1.29
RTTN-215ENST00000639487 SLC4A5Q9BY07 1137 aa7.01□□□□□ -1.29
RTTN-215ENST00000639487 MAN1B1Q9UKM7 699 aa7.01□□□□□ -1.29
RTTN-215ENST00000639487 TTC7AQ9ULT0 858 aaPredicted RBP7.01□□□□□ -1.29
RTTN-215ENST00000639487 ARHGEF35A5YM69 484 aa7.01□□□□□ -1.29
RTTN-215ENST00000639487 IRAK2O43187 625 aa7.01□□□□□ -1.29
RTTN-215ENST00000639487 HOXC11O43248 304 aaPredicted RBP7.01□□□□□ -1.29
RTTN-215ENST00000639487 GREM1O60565 184 aa7.01□□□□□ -1.29
RTTN-215ENST00000639487 ZNF202O95125 648 aa7.01□□□□□ -1.29
RTTN-215ENST00000639487 ARHGAP25P42331 645 aa7.01□□□□□ -1.29
RTTN-215ENST00000639487 LIMK1P53667 647 aa7.01□□□□□ -1.29
RTTN-215ENST00000639487 MYL6P60660 151 aa7.01□□□□□ -1.29
RTTN-215ENST00000639487 SLC12A1Q13621 1099 aa7.01□□□□□ -1.29
RTTN-215ENST00000639487 DNAJC21Q5F1R6 531 aaKnown RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms