RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 PABPC1LQ4VXU2 614 aaKnown RBP19.73■□□□□ 0.75
VCX3A-203ENST00000612369 C9orf57Q5W0N0 161 aa19.73■□□□□ 0.75
VCX3A-203ENST00000612369 CNNM4Q6P4Q7 775 aa19.73■□□□□ 0.75
VCX3A-203ENST00000612369 SLC44A3Q8N4M1 653 aa19.73■□□□□ 0.75
VCX3A-203ENST00000612369 DHX58Q96C10 678 aa19.73■□□□□ 0.75
VCX3A-203ENST00000612369 PYM1Q9BRP8 204 aaKnown RBP19.73■□□□□ 0.75
VCX3A-203ENST00000612369 TRIM9Q9C026 710 aa19.73■□□□□ 0.75
VCX3A-203ENST00000612369 CYP4F11Q9HBI6 524 aa19.73■□□□□ 0.75
VCX3A-203ENST00000612369 FAM13BQ9NYF5 915 aa19.73■□□□□ 0.75
VCX3A-203ENST00000612369 DNMT3BQ9UBC3 853 aaKnown RBP19.73■□□□□ 0.75
VCX3A-203ENST00000612369 OR6C75A6NL08 312 aa19.72■□□□□ 0.75
VCX3A-203ENST00000612369 KIAA0391O15091 583 aaKnown RBP19.72■□□□□ 0.75
VCX3A-203ENST00000612369 ODC1P11926 461 aa19.72■□□□□ 0.75
VCX3A-203ENST00000612369 CPB1P15086 417 aa19.72■□□□□ 0.75
VCX3A-203ENST00000612369 ANK1P16157 1881 aa19.72■□□□□ 0.75
VCX3A-203ENST00000612369 ME1P48163 572 aa19.72■□□□□ 0.75
VCX3A-203ENST00000612369 NTHL1P78549 312 aa19.72■□□□□ 0.75
VCX3A-203ENST00000612369 HTR4Q13639 388 aa19.72■□□□□ 0.75
VCX3A-203ENST00000612369 FOXD4L6Q3SYB3 417 aaPredicted RBP19.72■□□□□ 0.75
VCX3A-203ENST00000612369 FOXD4L3Q6VB84 417 aaPredicted RBP19.72■□□□□ 0.75
VCX3A-203ENST00000612369 FGF13Q92913 245 aa19.72■□□□□ 0.75
VCX3A-203ENST00000612369 DOCK6Q96HP0 2047 aa19.72■□□□□ 0.75
VCX3A-203ENST00000612369 SENP8Q96LD8 212 aa19.72■□□□□ 0.75
VCX3A-203ENST00000612369 IKZF4Q9H2S9 585 aa19.72■□□□□ 0.75
VCX3A-203ENST00000612369 DPP3Q9NY33 737 aa19.72■□□□□ 0.75
VCX3A-203ENST00000612369 RCOR1Q9UKL0 485 aa19.72■□□□□ 0.75
VCX3A-203ENST00000612369 PCDHA7Q9UN72 937 aa19.72■□□□□ 0.75
VCX3A-203ENST00000612369 PDGFBP01127 241 aaPredicted RBP19.71■□□□□ 0.75
VCX3A-203ENST00000612369 PKP1Q13835 747 aa19.71■□□□□ 0.75
VCX3A-203ENST00000612369 OVOS1Q6IE37 1185 aa19.71■□□□□ 0.75
VCX3A-203ENST00000612369 MTSS1LQ765P7 747 aa19.71■□□□□ 0.75
VCX3A-203ENST00000612369 BRSK2Q8IWQ3 736 aa19.71■□□□□ 0.75
VCX3A-203ENST00000612369 ELMOD1Q8N336 334 aa19.71■□□□□ 0.75
VCX3A-203ENST00000612369 TMEM130Q8N3G9 435 aa19.71■□□□□ 0.75
VCX3A-203ENST00000612369 SPRYD3Q8NCJ5 442 aa19.71■□□□□ 0.75
VCX3A-203ENST00000612369 RSAD2Q8WXG1 361 aa19.71■□□□□ 0.75
VCX3A-203ENST00000612369 C7orf25Q9BPX7 421 aa19.71■□□□□ 0.75
VCX3A-203ENST00000612369 FAM213AQ9BRX8 229 aa19.71■□□□□ 0.75
VCX3A-203ENST00000612369 MFSD1Q9H3U5 465 aa19.71■□□□□ 0.75
VCX3A-203ENST00000612369 WNT16Q9UBV4 365 aa19.71■□□□□ 0.75
VCX3A-203ENST00000612369 TIMM13Q9Y5L4 95 aaPredicted RBP19.71■□□□□ 0.75
VCX3A-203ENST00000612369 INSL5Q9Y5Q6 135 aa19.71■□□□□ 0.75
VCX3A-203ENST00000612369 PPEF2O14830 753 aa19.7■□□□□ 0.74
VCX3A-203ENST00000612369 POLR2DO15514 142 aaKnown RBP19.7■□□□□ 0.74
VCX3A-203ENST00000612369 PRPF6O94906 941 aaKnown RBP19.7■□□□□ 0.74
VCX3A-203ENST00000612369 SEC24AO95486 1093 aa19.7■□□□□ 0.74
VCX3A-203ENST00000612369 CYP11A1P05108 521 aa19.7■□□□□ 0.74
VCX3A-203ENST00000612369 RHOP08100 348 aa19.7■□□□□ 0.74
VCX3A-203ENST00000612369 SRFP11831 508 aa19.7■□□□□ 0.74
VCX3A-203ENST00000612369 TAF6P49848 677 aa19.7■□□□□ 0.74
VCX3A-203ENST00000612369 CLCN5P51795 746 aa19.7■□□□□ 0.74
VCX3A-203ENST00000612369 ADCY1Q08828 1119 aa19.7■□□□□ 0.74
VCX3A-203ENST00000612369 GPR17Q13304 367 aa19.7■□□□□ 0.74
VCX3A-203ENST00000612369 MYBPC2Q14324 1141 aa19.7■□□□□ 0.74
VCX3A-203ENST00000612369 RESP18Q5W5W9 173 aa19.7■□□□□ 0.74
VCX3A-203ENST00000612369 ITFG1Q8TB96 612 aa19.7■□□□□ 0.74
VCX3A-203ENST00000612369 CACTINQ8WUQ7 758 aaKnown RBP19.7■□□□□ 0.74
VCX3A-203ENST00000612369 HCFC1R1Q9NWW0 138 aa19.7■□□□□ 0.74
VCX3A-203ENST00000612369 FBXL21Q9UKT6 434 aa19.7■□□□□ 0.74
VCX3A-203ENST00000612369 DSEQ9UL01 958 aa19.7■□□□□ 0.74
VCX3A-203ENST00000612369 MRPS23Q9Y3D9 190 aaKnown RBP19.7■□□□□ 0.74
VCX3A-203ENST00000612369 KMT2EQ8IZD2 1858 aa19.7■□□□□ 0.74
VCX3A-203ENST00000612369 ZNF197O14709 1029 aa19.69■□□□□ 0.74
VCX3A-203ENST00000612369 SPTLC1O15269 473 aa19.69■□□□□ 0.74
VCX3A-203ENST00000612369 EIF3DO15371 548 aaKnown RBP eCLIP19.69■□□□□ 0.74
VCX3A-203ENST00000612369 EXTL3O43909 919 aa19.69■□□□□ 0.74
VCX3A-203ENST00000612369 MICAL2O94851 1124 aa19.69■□□□□ 0.74
VCX3A-203ENST00000612369 PTPN5P54829 565 aa19.69■□□□□ 0.74
VCX3A-203ENST00000612369 VCPP55072 806 aaKnown RBP19.69■□□□□ 0.74
VCX3A-203ENST00000612369 ASIC1P78348 528 aa19.69■□□□□ 0.74
VCX3A-203ENST00000612369 DNM1Q05193 864 aaKnown RBP19.69■□□□□ 0.74
VCX3A-203ENST00000612369 IER5LQ5T953 404 aa19.69■□□□□ 0.74
VCX3A-203ENST00000612369 ASTLQ6HA08 431 aaPredicted RBP19.69■□□□□ 0.74
VCX3A-203ENST00000612369 IQCEQ6IPM2 695 aa19.69■□□□□ 0.74
VCX3A-203ENST00000612369 RNF19BQ6ZMZ0 732 aa19.69■□□□□ 0.74
VCX3A-203ENST00000612369 EFCAB13Q8IY85 973 aa19.69■□□□□ 0.74
VCX3A-203ENST00000612369 FGFBP2Q9BYJ0 223 aa19.69■□□□□ 0.74
VCX3A-203ENST00000612369 GDE1Q9NZC3 331 aa19.69■□□□□ 0.74
VCX3A-203ENST00000612369 NUMBLQ9Y6R0 609 aa19.69■□□□□ 0.74
VCX3A-203ENST00000612369 WDFY4Q6ZS81 3184 aa19.69■□□□□ 0.74
VCX3A-203ENST00000612369 NOTCH4Q99466 2003 aa19.68■□□□□ 0.74
VCX3A-203ENST00000612369 NARSO43776 548 aaKnown RBP19.68■□□□□ 0.74
VCX3A-203ENST00000612369 PNPLA4P41247 253 aa19.68■□□□□ 0.74
VCX3A-203ENST00000612369 PLD1Q13393 1074 aa19.68■□□□□ 0.74
VCX3A-203ENST00000612369 SV2CQ496J9 727 aa19.68■□□□□ 0.74
VCX3A-203ENST00000612369 ARMCX5Q6P1M9 558 aa19.68■□□□□ 0.74
VCX3A-203ENST00000612369 UNC13DQ70J99 1090 aa19.68■□□□□ 0.74
VCX3A-203ENST00000612369 METTL23Q86XA0 190 aa19.68■□□□□ 0.74
VCX3A-203ENST00000612369 NPAS3Q8IXF0 933 aa19.68■□□□□ 0.74
VCX3A-203ENST00000612369 GPD1LQ8N335 351 aa19.68■□□□□ 0.74
VCX3A-203ENST00000612369 LEMD2Q8NC56 503 aa19.68■□□□□ 0.74
VCX3A-203ENST00000612369 ZNF507Q8TCN5 953 aa19.68■□□□□ 0.74
VCX3A-203ENST00000612369 SAAL1Q96ER3 474 aa19.68■□□□□ 0.74
VCX3A-203ENST00000612369 ZNF512Q96ME7 567 aaPredicted RBP19.68■□□□□ 0.74
VCX3A-203ENST00000612369 ZNF560Q96MR9 790 aa19.68■□□□□ 0.74
VCX3A-203ENST00000612369 CBWD1Q9BRT8 395 aa19.68■□□□□ 0.74
VCX3A-203ENST00000612369 IRF2BPLQ9H1B7 796 aa19.68■□□□□ 0.74
VCX3A-203ENST00000612369 SLC2A4RGQ9NR83 387 aa19.68■□□□□ 0.74
VCX3A-203ENST00000612369 RBAKQ9NYW8 714 aaPredicted RBP19.68■□□□□ 0.74
VCX3A-203ENST00000612369 HSFX1Q9UBD0 423 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms