RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 SP2Q02086 613 aa21.46■■□□□ 1.03
SHKBP1-225ENST00000600733 XKR3Q5GH77 459 aa21.46■■□□□ 1.03
SHKBP1-225ENST00000600733 NBPF12Q5TAG4 269 aaPredicted RBP21.46■■□□□ 1.03
SHKBP1-225ENST00000600733 PLEKHA7Q6IQ23 1121 aa21.46■■□□□ 1.03
SHKBP1-225ENST00000600733 HIBCHQ6NVY1 386 aaPredicted RBP21.46■■□□□ 1.03
SHKBP1-225ENST00000600733 GSTA5Q7RTV2 222 aa21.46■■□□□ 1.03
SHKBP1-225ENST00000600733 OR5B17Q8NGF7 314 aa21.46■■□□□ 1.03
SHKBP1-225ENST00000600733 TARS2Q9BW92 718 aaKnown RBP21.46■■□□□ 1.03
SHKBP1-225ENST00000600733 MRPL47Q9HD33 250 aaKnown RBP21.46■■□□□ 1.03
SHKBP1-225ENST00000600733 STK32BQ9NY57 414 aa21.46■■□□□ 1.03
SHKBP1-225ENST00000600733 STYXL1Q9Y6J8 313 aa21.46■■□□□ 1.03
SHKBP1-225ENST00000600733 H0YCG3 227 aa21.46■■□□□ 1.03
SHKBP1-225ENST00000600733 EDN1P05305 212 aa21.46■■□□□ 1.03
SHKBP1-225ENST00000600733 KRT10P13645 584 aa21.46■■□□□ 1.03
SHKBP1-225ENST00000600733 ATP4AP20648 1035 aa21.46■■□□□ 1.03
SHKBP1-225ENST00000600733 NOP14P78316 857 aaKnown RBP21.46■■□□□ 1.03
SHKBP1-225ENST00000600733 PDE4CQ08493 712 aa21.46■■□□□ 1.03
SHKBP1-225ENST00000600733 KAZNQ674X7 775 aa21.46■■□□□ 1.03
SHKBP1-225ENST00000600733 SRRM1Q8IYB3 904 aaKnown RBP21.46■■□□□ 1.03
SHKBP1-225ENST00000600733 GLIS1Q8NBF1 620 aa21.46■■□□□ 1.03
SHKBP1-225ENST00000600733 AGAP1Q9UPQ3 857 aa21.46■■□□□ 1.03
SHKBP1-225ENST00000600733 NAALADL1Q9UQQ1 740 aa21.46■■□□□ 1.03
SHKBP1-225ENST00000600733 USP15Q9Y4E8 981 aaPredicted RBP21.46■■□□□ 1.03
SHKBP1-225ENST00000600733 RLFQ13129 1914 aa21.46■■□□□ 1.03
SHKBP1-225ENST00000600733 NFASCO94856 1347 aa21.46■■□□□ 1.03
SHKBP1-225ENST00000600733 TCEA3O75764 348 aa21.45■■□□□ 1.02
SHKBP1-225ENST00000600733 CLTAP09496 248 aa21.45■■□□□ 1.02
SHKBP1-225ENST00000600733 GLRA2P23416 452 aa21.45■■□□□ 1.02
SHKBP1-225ENST00000600733 KLRC2P26717 231 aa21.45■■□□□ 1.02
SHKBP1-225ENST00000600733 HMGCS2P54868 508 aa21.45■■□□□ 1.02
SHKBP1-225ENST00000600733 ELF3P78545 371 aaPredicted RBP21.45■■□□□ 1.02
SHKBP1-225ENST00000600733 TMEM132BQ14DG7 1078 aa21.45■■□□□ 1.02
SHKBP1-225ENST00000600733 ZKSCAN8Q15776 578 aaPredicted RBP21.45■■□□□ 1.02
SHKBP1-225ENST00000600733 P3H1Q32P28 736 aa21.45■■□□□ 1.02
SHKBP1-225ENST00000600733 MIS18BP1Q6P0N0 1132 aa21.45■■□□□ 1.02
SHKBP1-225ENST00000600733 TRIM72Q6ZMU5 477 aa21.45■■□□□ 1.02
SHKBP1-225ENST00000600733 PHF13Q86YI8 300 aaPredicted RBP21.45■■□□□ 1.02
SHKBP1-225ENST00000600733 EXD1Q8NHP7 514 aa21.45■■□□□ 1.02
SHKBP1-225ENST00000600733 MSTO1Q9BUK6 570 aa21.45■■□□□ 1.02
SHKBP1-225ENST00000600733 A1CFQ9NQ94 594 aaKnown RBP21.45■■□□□ 1.02
SHKBP1-225ENST00000600733 CYP39A1Q9NYL5 469 aa21.45■■□□□ 1.02
SHKBP1-225ENST00000600733 FBXO40Q9UH90 709 aa21.45■■□□□ 1.02
SHKBP1-225ENST00000600733 K7ERI5 159 aa21.45■■□□□ 1.02
SHKBP1-225ENST00000600733 GSTA1P08263 222 aa21.45■■□□□ 1.02
SHKBP1-225ENST00000600733 SUPT20HL2P0C7V6 817 aa21.45■■□□□ 1.02
SHKBP1-225ENST00000600733 HARSP12081 509 aaKnown RBP21.45■■□□□ 1.02
SHKBP1-225ENST00000600733 EN1Q05925 392 aaPredicted RBP21.45■■□□□ 1.02
SHKBP1-225ENST00000600733 SUPT20HL1Q3ZLR7 823 aa21.45■■□□□ 1.02
SHKBP1-225ENST00000600733 CYP4F22Q6NT55 531 aa21.45■■□□□ 1.02
SHKBP1-225ENST00000600733 GSTTP1A0A1W2PQM5 241 aa21.44■■□□□ 1.02
SHKBP1-225ENST00000600733 MGRN1O60291 552 aa21.44■■□□□ 1.02
SHKBP1-225ENST00000600733 UBOX5O94941 541 aa21.44■■□□□ 1.02
SHKBP1-225ENST00000600733 TMEM63BQ5T3F8 832 aa21.44■■□□□ 1.02
SHKBP1-225ENST00000600733 ZFYVE27Q5T4F4 411 aa21.44■■□□□ 1.02
SHKBP1-225ENST00000600733 SAMD7Q7Z3H4 446 aa21.44■■□□□ 1.02
SHKBP1-225ENST00000600733 DEPTORQ8TB45 409 aa21.44■■□□□ 1.02
SHKBP1-225ENST00000600733 CKAP2Q8WWK9 683 aa21.44■■□□□ 1.02
SHKBP1-225ENST00000600733 FAM212AQ96EL1 285 aa21.44■■□□□ 1.02
SHKBP1-225ENST00000600733 RBM15Q96T37 977 aaKnown RBP eCLIP21.44■■□□□ 1.02
SHKBP1-225ENST00000600733 FHDC1Q9C0D6 1143 aaPredicted RBP21.44■■□□□ 1.02
SHKBP1-225ENST00000600733 SCINQ9Y6U3 715 aa21.44■■□□□ 1.02
SHKBP1-225ENST00000600733 SPATA31C2B4DYI2 1134 aa21.44■■□□□ 1.02
SHKBP1-225ENST00000600733 CDH16O75309 829 aa21.44■■□□□ 1.02
SHKBP1-225ENST00000600733 POTEJP0CG39 1038 aa21.44■■□□□ 1.02
SHKBP1-225ENST00000600733 RDXP35241 583 aaKnown RBP21.44■■□□□ 1.02
SHKBP1-225ENST00000600733 NFX1Q12986 1120 aaKnown RBP21.44■■□□□ 1.02
SHKBP1-225ENST00000600733 CCDC63Q8NA47 563 aa21.44■■□□□ 1.02
SHKBP1-225ENST00000600733 FEZF2Q8TBJ5 459 aa21.44■■□□□ 1.02
SHKBP1-225ENST00000600733 VCPIP1Q96JH7 1222 aa21.44■■□□□ 1.02
SHKBP1-225ENST00000600733 PORCNQ9H237 461 aa21.44■■□□□ 1.02
SHKBP1-225ENST00000600733 GINM1Q9NU53 330 aa21.44■■□□□ 1.02
SHKBP1-225ENST00000600733 LGALS13Q9UHV8 139 aa21.44■■□□□ 1.02
SHKBP1-225ENST00000600733 DNPEPQ9ULA0 475 aa21.44■■□□□ 1.02
SHKBP1-225ENST00000600733 ZSCAN5DPP0CG00 497 aa21.43■■□□□ 1.02
SHKBP1-225ENST00000600733 ATF7P17544 494 aaPredicted RBP21.43■■□□□ 1.02
SHKBP1-225ENST00000600733 TBC1D1Q86TI0 1168 aaPredicted RBP21.43■■□□□ 1.02
SHKBP1-225ENST00000600733 CDHR1Q96JP9 859 aa21.43■■□□□ 1.02
SHKBP1-225ENST00000600733 VPS33BQ9H267 617 aa21.43■■□□□ 1.02
SHKBP1-225ENST00000600733 PARVAQ9NVD7 372 aa21.43■■□□□ 1.02
SHKBP1-225ENST00000600733 PHIPQ8WWQ0 1821 aa21.43■■□□□ 1.02
SHKBP1-225ENST00000600733 CNTNAP2Q9UHC6 1331 aa21.43■■□□□ 1.02
SHKBP1-225ENST00000600733 MAGEA4P43358 317 aa21.43■■□□□ 1.02
SHKBP1-225ENST00000600733 C1QBPQ07021 282 aaKnown RBP21.43■■□□□ 1.02
SHKBP1-225ENST00000600733 NCOA4Q13772 614 aa21.43■■□□□ 1.02
SHKBP1-225ENST00000600733 CCDC91Q7Z6B0 441 aa21.43■■□□□ 1.02
SHKBP1-225ENST00000600733 CEP57Q86XR8 500 aa21.43■■□□□ 1.02
SHKBP1-225ENST00000600733 BBOF1Q8ND07 529 aa21.43■■□□□ 1.02
SHKBP1-225ENST00000600733 ZNF280CQ8ND82 737 aa21.43■■□□□ 1.02
SHKBP1-225ENST00000600733 ZNF606Q8WXB4 792 aa21.43■■□□□ 1.02
SHKBP1-225ENST00000600733 TGS1Q96RS0 853 aaKnown RBP21.43■■□□□ 1.02
SHKBP1-225ENST00000600733 A0A0B4J269 797 aa21.42■■□□□ 1.02
SHKBP1-225ENST00000600733 ETS1P14921 441 aa21.42■■□□□ 1.02
SHKBP1-225ENST00000600733 IBSPP21815 317 aaPredicted RBP21.42■■□□□ 1.02
SHKBP1-225ENST00000600733 STX2P32856 288 aa21.42■■□□□ 1.02
SHKBP1-225ENST00000600733 FSTL1Q12841 308 aa21.42■■□□□ 1.02
SHKBP1-225ENST00000600733 GNPTABQ3T906 1256 aa21.42■■□□□ 1.02
SHKBP1-225ENST00000600733 HP1BP3Q5SSJ5 553 aaPredicted RBP21.42■■□□□ 1.02
SHKBP1-225ENST00000600733 PRAMEF18Q5VWM3 479 aa21.42■■□□□ 1.02
SHKBP1-225ENST00000600733 TCP11Q8WWU5 503 aa21.42■■□□□ 1.02
SHKBP1-225ENST00000600733 ACSF2Q96CM8 615 aaPredicted RBP21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms