RNA–Protein interactions for RNA: ENST00000599040.5

FARP1-226, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-226ENST00000599040 STX10O60499 249 aa10.14□□□□□ -0.79
FARP1-226ENST00000599040 B4GALT3O60512 393 aa10.14□□□□□ -0.79
FARP1-226ENST00000599040 GLUD1P00367 558 aa10.14□□□□□ -0.79
FARP1-226ENST00000599040 NR3C1P04150 777 aa10.14□□□□□ -0.79
FARP1-226ENST00000599040 PRKCBP05771 671 aa10.14□□□□□ -0.79
FARP1-226ENST00000599040 SP100P23497 879 aaPredicted RBP10.14□□□□□ -0.79
FARP1-226ENST00000599040 AKAP5P24588 427 aa10.14□□□□□ -0.79
FARP1-226ENST00000599040 HOXD11P31277 338 aaPredicted RBP10.14□□□□□ -0.79
FARP1-226ENST00000599040 NPTX2P47972 431 aa10.14□□□□□ -0.79
FARP1-226ENST00000599040 AFF1P51825 1210 aaKnown RBP10.14□□□□□ -0.79
FARP1-226ENST00000599040 DSG1Q02413 1049 aa10.14□□□□□ -0.79
FARP1-226ENST00000599040 CETN1Q12798 172 aa10.14□□□□□ -0.79
FARP1-226ENST00000599040 MAPK7Q13164 816 aa10.14□□□□□ -0.79
FARP1-226ENST00000599040 NR1I3Q14994 352 aa10.14□□□□□ -0.79
FARP1-226ENST00000599040 DCAF4L1Q3SXM0 396 aa10.14□□□□□ -0.79
FARP1-226ENST00000599040 VWA3BQ502W6 1294 aa10.14□□□□□ -0.79
FARP1-226ENST00000599040 ZCWPW2Q504Y3 356 aa10.14□□□□□ -0.79
FARP1-226ENST00000599040 CEP135Q66GS9 1140 aa10.14□□□□□ -0.79
FARP1-226ENST00000599040 ARMCX5Q6P1M9 558 aa10.14□□□□□ -0.79
FARP1-226ENST00000599040 TMC5Q6UXY8 1006 aa10.14□□□□□ -0.79
FARP1-226ENST00000599040 OTOP3Q7RTS5 596 aa10.14□□□□□ -0.79
FARP1-226ENST00000599040 FRMD5Q7Z6J6 570 aa10.14□□□□□ -0.79
FARP1-226ENST00000599040 GPR149Q86SP6 731 aa10.14□□□□□ -0.79
FARP1-226ENST00000599040 CNGA4Q8IV77 575 aa10.14□□□□□ -0.79
FARP1-226ENST00000599040 VSTM4Q8IW00 320 aa10.14□□□□□ -0.79
FARP1-226ENST00000599040 DAW1Q8N136 415 aa10.14□□□□□ -0.79
FARP1-226ENST00000599040 KREMEN2Q8NCW0 462 aa10.14□□□□□ -0.79
FARP1-226ENST00000599040 CCDC112Q8NEF3 446 aa10.14□□□□□ -0.79
FARP1-226ENST00000599040 CMASQ8NFW8 434 aaPredicted RBP10.14□□□□□ -0.79
FARP1-226ENST00000599040 HDAC7Q8WUI4 952 aa10.14□□□□□ -0.79
FARP1-226ENST00000599040 ZFP42Q96MM3 310 aa10.14□□□□□ -0.79
FARP1-226ENST00000599040 VN1R3Q9BXE9 311 aa10.14□□□□□ -0.79
FARP1-226ENST00000599040 IRF2BPLQ9H1B7 796 aa10.14□□□□□ -0.79
FARP1-226ENST00000599040 HSD3B7Q9H2F3 369 aa10.14□□□□□ -0.79
FARP1-226ENST00000599040 RNF39Q9H2S5 420 aa10.14□□□□□ -0.79
FARP1-226ENST00000599040 FZD8Q9H461 694 aa10.14□□□□□ -0.79
FARP1-226ENST00000599040 GPRC5CQ9NQ84 441 aa10.14□□□□□ -0.79
FARP1-226ENST00000599040 MARCH5Q9NX47 278 aa10.14□□□□□ -0.79
FARP1-226ENST00000599040 ADAM28Q9UKQ2 775 aa10.14□□□□□ -0.79
FARP1-226ENST00000599040 A0A1W2PQC6 194 aa10.13□□□□□ -0.79
FARP1-226ENST00000599040 C2CD4DB7Z1M9 353 aa10.13□□□□□ -0.79
FARP1-226ENST00000599040 K7ERI5 159 aa10.13□□□□□ -0.79
FARP1-226ENST00000599040 ACKR2O00590 384 aa10.13□□□□□ -0.79
FARP1-226ENST00000599040 EXOC3O60645 756 aa10.13□□□□□ -0.79
FARP1-226ENST00000599040 LILRB3O75022 631 aa10.13□□□□□ -0.79
FARP1-226ENST00000599040 TADA2AO75478 443 aa10.13□□□□□ -0.79
FARP1-226ENST00000599040 THP07101 528 aa10.13□□□□□ -0.79
FARP1-226ENST00000599040 MATR3P43243 847 aaKnown RBP eCLIP10.13□□□□□ -0.792e-6■■■■■ 30.6
FARP1-226ENST00000599040 LIG4P49917 911 aa10.13□□□□□ -0.79
FARP1-226ENST00000599040 CASP5P51878 434 aa10.13□□□□□ -0.79
FARP1-226ENST00000599040 PMS1P54277 932 aaKnown RBP10.13□□□□□ -0.79
FARP1-226ENST00000599040 PTPN5P54829 565 aa10.13□□□□□ -0.79
FARP1-226ENST00000599040 MARSP56192 900 aaKnown RBP10.13□□□□□ -0.79
FARP1-226ENST00000599040 ELAVL2Q12926 359 aaKnown RBP10.13□□□□□ -0.79
FARP1-226ENST00000599040 TUSC3Q13454 348 aa10.13□□□□□ -0.79
FARP1-226ENST00000599040 ZC2HC1CQ53FD0 456 aaPredicted RBP10.13□□□□□ -0.79
FARP1-226ENST00000599040 SLFN12LQ6IEE8 588 aa10.13□□□□□ -0.79
FARP1-226ENST00000599040 FUT10Q6P4F1 479 aa10.13□□□□□ -0.79
FARP1-226ENST00000599040 PDXDC1Q6P996 788 aa10.13□□□□□ -0.79
FARP1-226ENST00000599040 CCDC186Q7Z3E2 898 aa10.13□□□□□ -0.79
FARP1-226ENST00000599040 SLC9A9Q8IVB4 645 aa10.13□□□□□ -0.79
FARP1-226ENST00000599040 MAP4K3Q8IVH8 894 aa10.13□□□□□ -0.79
FARP1-226ENST00000599040 FAM186BQ8IYM0 893 aa10.13□□□□□ -0.79
FARP1-226ENST00000599040 C12orf76Q8N812 135 aaPredicted RBP10.13□□□□□ -0.79
FARP1-226ENST00000599040 RHOBTB2Q9BYZ6 727 aa10.13□□□□□ -0.79
FARP1-226ENST00000599040 PLEKHA4Q9H4M7 779 aa10.13□□□□□ -0.79
FARP1-226ENST00000599040 TMEM134Q9H6X4 195 aa10.13□□□□□ -0.79
FARP1-226ENST00000599040 RXFP1Q9HBX9 757 aa10.13□□□□□ -0.79
FARP1-226ENST00000599040 KIAA1586Q9HCI6 787 aa10.13□□□□□ -0.79
FARP1-226ENST00000599040 MAN1C1Q9NR34 630 aa10.13□□□□□ -0.79
FARP1-226ENST00000599040 TBX20Q9UMR3 447 aa10.13□□□□□ -0.79
FARP1-226ENST00000599040 MYO10Q9HD67 2058 aa10.12□□□□□ -0.79
FARP1-226ENST00000599040 AKR1B15C9JRZ8 316 aaPredicted RBP10.12□□□□□ -0.79
FARP1-226ENST00000599040 HNRNPDLO14979 420 aaKnown RBP10.12□□□□□ -0.79
FARP1-226ENST00000599040 TEX28O15482 410 aa10.12□□□□□ -0.79
FARP1-226ENST00000599040 CCP110O43303 1012 aa10.12□□□□□ -0.79
FARP1-226ENST00000599040 N4BP1O75113 896 aaKnown RBP10.12□□□□□ -0.79
FARP1-226ENST00000599040 PPP1R37O75864 691 aa10.12□□□□□ -0.79
FARP1-226ENST00000599040 LDHAP00338 332 aaKnown RBP10.12□□□□□ -0.79
FARP1-226ENST00000599040 WEE2P0C1S8 567 aa10.12□□□□□ -0.79
FARP1-226ENST00000599040 TRIM21P19474 475 aaKnown RBP10.12□□□□□ -0.79
FARP1-226ENST00000599040 CYP2J2P51589 502 aa10.12□□□□□ -0.79
FARP1-226ENST00000599040 NUBP1P53384 320 aa10.12□□□□□ -0.79
FARP1-226ENST00000599040 KIAA0319Q5VV43 1072 aa10.12□□□□□ -0.79
FARP1-226ENST00000599040 TCERG1LQ5VWI1 586 aa10.12□□□□□ -0.79
FARP1-226ENST00000599040 ZSCAN30Q86W11 494 aa10.12□□□□□ -0.79
FARP1-226ENST00000599040 CDR2LQ86X02 465 aaPredicted RBP10.12□□□□□ -0.79
FARP1-226ENST00000599040 FMNL3Q8IVF7 1028 aa10.12□□□□□ -0.79
FARP1-226ENST00000599040 C12orf56Q8IXR9 622 aa10.12□□□□□ -0.79
FARP1-226ENST00000599040 ZC3H3Q8IXZ2 948 aaKnown RBP10.12□□□□□ -0.79
FARP1-226ENST00000599040 RNF168Q8IYW5 571 aaPredicted RBP10.12□□□□□ -0.79
FARP1-226ENST00000599040 XXYLT1Q8NBI6 393 aa10.12□□□□□ -0.79
FARP1-226ENST00000599040 TMEM161BQ8NDZ6 487 aa10.12□□□□□ -0.79
FARP1-226ENST00000599040 GLIS3Q8NEA6 775 aa10.12□□□□□ -0.79
FARP1-226ENST00000599040 NAP1L5Q96NT1 182 aaPredicted RBP10.12□□□□□ -0.79
FARP1-226ENST00000599040 MED15Q96RN5 788 aa10.12□□□□□ -0.79
FARP1-226ENST00000599040 STRA6Q9BX79 667 aa10.12□□□□□ -0.79
FARP1-226ENST00000599040 NDST4Q9H3R1 872 aa10.12□□□□□ -0.79
FARP1-226ENST00000599040 PDZD7Q9H5P4 517 aa10.12□□□□□ -0.79
FARP1-226ENST00000599040 POLD4Q9HCU8 107 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms