RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 PRPF6O94906 941 aaKnown RBP11.39□□□□□ -0.59
CCDC9-203ENST00000596938 SEC24AO95486 1093 aa11.39□□□□□ -0.59
CCDC9-203ENST00000596938 CYP11A1P05108 521 aa11.39□□□□□ -0.59
CCDC9-203ENST00000596938 PTPN2P17706 415 aa11.39□□□□□ -0.59
CCDC9-203ENST00000596938 PLA2G5P39877 138 aa11.39□□□□□ -0.59
CCDC9-203ENST00000596938 ARPP19P56211 112 aa11.39□□□□□ -0.59
CCDC9-203ENST00000596938 NTHL1P78549 312 aa11.39□□□□□ -0.59
CCDC9-203ENST00000596938 EPM2AIP1Q7L775 607 aaPredicted RBP11.39□□□□□ -0.59
CCDC9-203ENST00000596938 USP37Q86T82 979 aa11.39□□□□□ -0.59
CCDC9-203ENST00000596938 ZNF507Q8TCN5 953 aa11.39□□□□□ -0.59
CCDC9-203ENST00000596938 FGF13Q92913 245 aa11.39□□□□□ -0.59
CCDC9-203ENST00000596938 FAM122AQ96E09 287 aa11.39□□□□□ -0.59
CCDC9-203ENST00000596938 SENP8Q96LD8 212 aa11.39□□□□□ -0.59
CCDC9-203ENST00000596938 PRRX2Q99811 253 aa11.39□□□□□ -0.59
CCDC9-203ENST00000596938 SMOC2Q9H3U7 446 aa11.39□□□□□ -0.59
CCDC9-203ENST00000596938 CYP4F11Q9HBI6 524 aa11.39□□□□□ -0.59
CCDC9-203ENST00000596938 DPP3Q9NY33 737 aa11.39□□□□□ -0.59
CCDC9-203ENST00000596938 DSEQ9UL01 958 aa11.39□□□□□ -0.59
CCDC9-203ENST00000596938 POLIQ9UNA4 740 aa11.39□□□□□ -0.59
CCDC9-203ENST00000596938 DUSP12Q9UNI6 340 aa11.39□□□□□ -0.59
CCDC9-203ENST00000596938 ZDHHC9Q9Y397 364 aa11.39□□□□□ -0.59
CCDC9-203ENST00000596938 TIMM13Q9Y5L4 95 aaPredicted RBP11.39□□□□□ -0.59
CCDC9-203ENST00000596938 PVALEFA0A1B0GWK0 134 aa11.38□□□□□ -0.59
CCDC9-203ENST00000596938 PPEF2O14830 753 aa11.38□□□□□ -0.59
CCDC9-203ENST00000596938 MICAL2O94851 1124 aa11.38□□□□□ -0.59
CCDC9-203ENST00000596938 LRG1P02750 347 aa11.38□□□□□ -0.59
CCDC9-203ENST00000596938 SLFN14P0C7P3 912 aa11.38□□□□□ -0.59
CCDC9-203ENST00000596938 ODC1P11926 461 aa11.38□□□□□ -0.59
CCDC9-203ENST00000596938 CMA1P23946 247 aa11.38□□□□□ -0.59
CCDC9-203ENST00000596938 AVPR2P30518 371 aa11.38□□□□□ -0.59
CCDC9-203ENST00000596938 HOXD13P35453 343 aa11.38□□□□□ -0.59
CCDC9-203ENST00000596938 NUBP1P53384 320 aa11.38□□□□□ -0.59
CCDC9-203ENST00000596938 SNRPFP62306 86 aaKnown RBP11.38□□□□□ -0.59
CCDC9-203ENST00000596938 ASIC1P78348 528 aa11.38□□□□□ -0.59
CCDC9-203ENST00000596938 EHHADHQ08426 723 aa11.38□□□□□ -0.59
CCDC9-203ENST00000596938 GPR17Q13304 367 aa11.38□□□□□ -0.59
CCDC9-203ENST00000596938 MYBPC2Q14324 1141 aa11.38□□□□□ -0.59
CCDC9-203ENST00000596938 PABPC1LQ4VXU2 614 aaKnown RBP11.38□□□□□ -0.59
CCDC9-203ENST00000596938 OVOS1Q6IE37 1185 aa11.38□□□□□ -0.59
CCDC9-203ENST00000596938 RNF19BQ6ZMZ0 732 aa11.38□□□□□ -0.59
CCDC9-203ENST00000596938 UNC13DQ70J99 1090 aa11.38□□□□□ -0.59
CCDC9-203ENST00000596938 GET4Q7L5D6 327 aaPredicted RBP11.38□□□□□ -0.59
CCDC9-203ENST00000596938 BRSK2Q8IWQ3 736 aa11.38□□□□□ -0.59
CCDC9-203ENST00000596938 EFCAB13Q8IY85 973 aa11.38□□□□□ -0.59
CCDC9-203ENST00000596938 CACTINQ8WUQ7 758 aaKnown RBP11.38□□□□□ -0.59
CCDC9-203ENST00000596938 RSAD2Q8WXG1 361 aa11.38□□□□□ -0.59
CCDC9-203ENST00000596938 BORCS6Q96GS4 357 aa11.38□□□□□ -0.59
CCDC9-203ENST00000596938 CBWD1Q9BRT8 395 aa11.38□□□□□ -0.59
CCDC9-203ENST00000596938 KIAA1586Q9HCI6 787 aa11.38□□□□□ -0.59
CCDC9-203ENST00000596938 HCFC1R1Q9NWW0 138 aa11.38□□□□□ -0.59
CCDC9-203ENST00000596938 WNT16Q9UBV4 365 aa11.38□□□□□ -0.59
CCDC9-203ENST00000596938 TECTAO75443 2155 aa11.38□□□□□ -0.59
CCDC9-203ENST00000596938 RHOP08100 348 aa11.37□□□□□ -0.59
CCDC9-203ENST00000596938 CPB1P15086 417 aa11.37□□□□□ -0.59
CCDC9-203ENST00000596938 PNPLA4P41247 253 aa11.37□□□□□ -0.59
CCDC9-203ENST00000596938 TAF6P49848 677 aa11.37□□□□□ -0.59
CCDC9-203ENST00000596938 CLCN5P51795 746 aa11.37□□□□□ -0.59
CCDC9-203ENST00000596938 ADCY1Q08828 1119 aa11.37□□□□□ -0.59
CCDC9-203ENST00000596938 HTR4Q13639 388 aa11.37□□□□□ -0.59
CCDC9-203ENST00000596938 FAM26FQ5R3K3 315 aa11.37□□□□□ -0.59
CCDC9-203ENST00000596938 IER5LQ5T953 404 aa11.37□□□□□ -0.59
CCDC9-203ENST00000596938 ARMCX5Q6P1M9 558 aa11.37□□□□□ -0.59
CCDC9-203ENST00000596938 GPD1LQ8N335 351 aa11.37□□□□□ -0.59
CCDC9-203ENST00000596938 GLIS3Q8NEA6 775 aa11.37□□□□□ -0.59
CCDC9-203ENST00000596938 ZSWIM2Q8NEG5 633 aa11.37□□□□□ -0.59
CCDC9-203ENST00000596938 ITFG1Q8TB96 612 aa11.37□□□□□ -0.59
CCDC9-203ENST00000596938 LEO1Q8WVC0 666 aaPredicted RBP11.37□□□□□ -0.59
CCDC9-203ENST00000596938 HPS3Q969F9 1004 aa11.37□□□□□ -0.59
CCDC9-203ENST00000596938 SAAL1Q96ER3 474 aa11.37□□□□□ -0.59
CCDC9-203ENST00000596938 PCIF1Q9H4Z3 704 aa11.37□□□□□ -0.59
CCDC9-203ENST00000596938 RBAKQ9NYW8 714 aaPredicted RBP11.37□□□□□ -0.59
CCDC9-203ENST00000596938 GDE1Q9NZC3 331 aa11.37□□□□□ -0.59
CCDC9-203ENST00000596938 HSFX1Q9UBD0 423 aa11.37□□□□□ -0.59
CCDC9-203ENST00000596938 USP25Q9UHP3 1055 aa11.37□□□□□ -0.59
CCDC9-203ENST00000596938 MRPS23Q9Y3D9 190 aaKnown RBP11.37□□□□□ -0.59
CCDC9-203ENST00000596938 ATP6V1DQ9Y5K8 247 aa11.37□□□□□ -0.59
CCDC9-203ENST00000596938 INSL5Q9Y5Q6 135 aa11.37□□□□□ -0.59
CCDC9-203ENST00000596938 GOLGA8IPA6NC78 632 aa11.36□□□□□ -0.59
CCDC9-203ENST00000596938 ZNF233A6NK53 670 aa11.36□□□□□ -0.59
CCDC9-203ENST00000596938 GOLGA8JA6NMD2 632 aa11.36□□□□□ -0.59
CCDC9-203ENST00000596938 KPNA7A9QM74 516 aa11.36□□□□□ -0.59
CCDC9-203ENST00000596938 CYB561D2O14569 222 aa11.36□□□□□ -0.59
CCDC9-203ENST00000596938 ZNF197O14709 1029 aa11.36□□□□□ -0.59
CCDC9-203ENST00000596938 NARSO43776 548 aaKnown RBP11.36□□□□□ -0.59
CCDC9-203ENST00000596938 PDGFBP01127 241 aaPredicted RBP11.36□□□□□ -0.59
CCDC9-203ENST00000596938 SRFP11831 508 aa11.36□□□□□ -0.59
CCDC9-203ENST00000596938 WNT7BP56706 349 aa11.36□□□□□ -0.59
CCDC9-203ENST00000596938 KRT85P78386 507 aa11.36□□□□□ -0.59
CCDC9-203ENST00000596938 TFAMQ00059 246 aaKnown RBP11.36□□□□□ -0.59
CCDC9-203ENST00000596938 SMARCB1Q12824 385 aa11.36□□□□□ -0.59
CCDC9-203ENST00000596938 SURF1Q15526 300 aa11.36□□□□□ -0.59
CCDC9-203ENST00000596938 SV2CQ496J9 727 aa11.36□□□□□ -0.59
CCDC9-203ENST00000596938 CYP4A22Q5TCH4 519 aa11.36□□□□□ -0.59
CCDC9-203ENST00000596938 CENPPQ6IPU0 288 aa11.36□□□□□ -0.59
CCDC9-203ENST00000596938 PARM1Q6UWI2 310 aa11.36□□□□□ -0.59
CCDC9-203ENST00000596938 MTSS1LQ765P7 747 aa11.36□□□□□ -0.59
CCDC9-203ENST00000596938 METTL23Q86XA0 190 aa11.36□□□□□ -0.59
CCDC9-203ENST00000596938 NPAS3Q8IXF0 933 aa11.36□□□□□ -0.59
CCDC9-203ENST00000596938 CEP57L1Q8IYX8 460 aa11.36□□□□□ -0.59
CCDC9-203ENST00000596938 THEM5Q8N1Q8 247 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms