RNA–Protein interactions for RNA: ENST00000587502.2

LSM7-204, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM7, Length 575 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-204ENST00000587502 ZDBF2Q9HCK1 2354 aa25.28■■□□□ 1.64
LSM7-204ENST00000587502 KIAA0391O15091 583 aaKnown RBP25.27■■□□□ 1.64
LSM7-204ENST00000587502 GUCY2FP51841 1108 aa25.27■■□□□ 1.64
LSM7-204ENST00000587502 CASP5P51878 434 aa25.27■■□□□ 1.64
LSM7-204ENST00000587502 PABPC1LQ4VXU2 614 aaKnown RBP25.27■■□□□ 1.64
LSM7-204ENST00000587502 CRELD2Q6UXH1 353 aaPredicted RBP25.27■■□□□ 1.64
LSM7-204ENST00000587502 CYP4F11Q9HBI6 524 aa25.27■■□□□ 1.64
LSM7-204ENST00000587502 PCDHA7Q9UN72 937 aa25.27■■□□□ 1.64
LSM7-204ENST00000587502 DOCK8Q8NF50 2099 aa25.27■■□□□ 1.64
LSM7-204ENST00000587502 OR6C75A6NL08 312 aa25.26■■□□□ 1.63
LSM7-204ENST00000587502 PIRO00625 290 aa25.26■■□□□ 1.63
LSM7-204ENST00000587502 POLR2DO15514 142 aaKnown RBP25.26■■□□□ 1.63
LSM7-204ENST00000587502 ODC1P11926 461 aa25.26■■□□□ 1.63
LSM7-204ENST00000587502 CPB1P15086 417 aa25.26■■□□□ 1.63
LSM7-204ENST00000587502 ASIC1P78348 528 aa25.26■■□□□ 1.63
LSM7-204ENST00000587502 DNM1Q05193 864 aaKnown RBP25.26■■□□□ 1.63
LSM7-204ENST00000587502 C7orf25Q9BPX7 421 aa25.26■■□□□ 1.63
LSM7-204ENST00000587502 FAM213AQ9BRX8 229 aa25.26■■□□□ 1.63
LSM7-204ENST00000587502 AVENQ9NQS1 362 aaPredicted RBP25.26■■□□□ 1.63
LSM7-204ENST00000587502 DPP3Q9NY33 737 aa25.26■■□□□ 1.63
LSM7-204ENST00000587502 DNMT3BQ9UBC3 853 aaKnown RBP25.26■■□□□ 1.63
LSM7-204ENST00000587502 RCOR1Q9UKL0 485 aa25.26■■□□□ 1.63
LSM7-204ENST00000587502 DSEQ9UL01 958 aa25.26■■□□□ 1.63
LSM7-204ENST00000587502 MUC6Q6W4X9 2439 aa25.26■■□□□ 1.63
LSM7-204ENST00000587502 ANO9A1A5B4 782 aa25.25■■□□□ 1.63
LSM7-204ENST00000587502 ANHXE9PGG2 379 aa25.25■■□□□ 1.63
LSM7-204ENST00000587502 PTPN2P17706 415 aa25.25■■□□□ 1.63
LSM7-204ENST00000587502 NUBP1P53384 320 aa25.25■■□□□ 1.63
LSM7-204ENST00000587502 NTHL1P78549 312 aa25.25■■□□□ 1.63
LSM7-204ENST00000587502 OVOS1Q6IE37 1185 aa25.25■■□□□ 1.63
LSM7-204ENST00000587502 ELMOD1Q8N336 334 aa25.25■■□□□ 1.63
LSM7-204ENST00000587502 SLC44A3Q8N4M1 653 aa25.25■■□□□ 1.63
LSM7-204ENST00000587502 IKZF4Q9H2S9 585 aa25.25■■□□□ 1.63
LSM7-204ENST00000587502 MFSD1Q9H3U5 465 aa25.25■■□□□ 1.63
LSM7-204ENST00000587502 SMOC2Q9H3U7 446 aa25.25■■□□□ 1.63
LSM7-204ENST00000587502 EXTL3O43909 919 aa25.24■■□□□ 1.63
LSM7-204ENST00000587502 PRPF6O94906 941 aaKnown RBP25.24■■□□□ 1.63
LSM7-204ENST00000587502 ADCY1Q08828 1119 aa25.24■■□□□ 1.63
LSM7-204ENST00000587502 MYBPC2Q14324 1141 aa25.24■■□□□ 1.63
LSM7-204ENST00000587502 RESP18Q5W5W9 173 aa25.24■■□□□ 1.63
LSM7-204ENST00000587502 MTSS1LQ765P7 747 aa25.24■■□□□ 1.63
LSM7-204ENST00000587502 BRSK2Q8IWQ3 736 aa25.24■■□□□ 1.63
LSM7-204ENST00000587502 CACTINQ8WUQ7 758 aaKnown RBP25.24■■□□□ 1.63
LSM7-204ENST00000587502 FGF13Q92913 245 aa25.24■■□□□ 1.63
LSM7-204ENST00000587502 SENP8Q96LD8 212 aa25.24■■□□□ 1.63
LSM7-204ENST00000587502 FBXL21Q9UKT6 434 aa25.24■■□□□ 1.63
LSM7-204ENST00000587502 TIMM13Q9Y5L4 95 aaPredicted RBP25.24■■□□□ 1.63
LSM7-204ENST00000587502 INSL5Q9Y5Q6 135 aa25.24■■□□□ 1.63
LSM7-204ENST00000587502 EIF3DO15371 548 aaKnown RBP eCLIP25.23■■□□□ 1.63
LSM7-204ENST00000587502 RHOP08100 348 aa25.23■■□□□ 1.63
LSM7-204ENST00000587502 SRFP11831 508 aa25.23■■□□□ 1.63
LSM7-204ENST00000587502 AVPR2P30518 371 aa25.23■■□□□ 1.63
LSM7-204ENST00000587502 TAF6P49848 677 aa25.23■■□□□ 1.63
LSM7-204ENST00000587502 HTR4Q13639 388 aa25.23■■□□□ 1.63
LSM7-204ENST00000587502 ARMCX5Q6P1M9 558 aa25.23■■□□□ 1.63
LSM7-204ENST00000587502 TMEM130Q8N3G9 435 aa25.23■■□□□ 1.63
LSM7-204ENST00000587502 HCFC1R1Q9NWW0 138 aa25.23■■□□□ 1.63
LSM7-204ENST00000587502 RBAKQ9NYW8 714 aaPredicted RBP25.23■■□□□ 1.63
LSM7-204ENST00000587502 WNT16Q9UBV4 365 aa25.23■■□□□ 1.63
LSM7-204ENST00000587502 MRPS23Q9Y3D9 190 aaKnown RBP25.23■■□□□ 1.63
LSM7-204ENST00000587502 DOCK6Q96HP0 2047 aa25.23■■□□□ 1.63
LSM7-204ENST00000587502 ZNF197O14709 1029 aa25.22■■□□□ 1.63
LSM7-204ENST00000587502 PPEF2O14830 753 aa25.22■■□□□ 1.63
LSM7-204ENST00000587502 SEC24AO95486 1093 aa25.22■■□□□ 1.63
LSM7-204ENST00000587502 CYP11A1P05108 521 aa25.22■■□□□ 1.63
LSM7-204ENST00000587502 PNPLA4P41247 253 aa25.22■■□□□ 1.63
LSM7-204ENST00000587502 GPR17Q13304 367 aa25.22■■□□□ 1.63
LSM7-204ENST00000587502 IQCEQ6IPM2 695 aa25.22■■□□□ 1.63
LSM7-204ENST00000587502 UNC13DQ70J99 1090 aa25.22■■□□□ 1.63
LSM7-204ENST00000587502 METTL23Q86XA0 190 aa25.22■■□□□ 1.63
LSM7-204ENST00000587502 CEP57L1Q8IYX8 460 aa25.22■■□□□ 1.63
LSM7-204ENST00000587502 ITFG1Q8TB96 612 aa25.22■■□□□ 1.63
LSM7-204ENST00000587502 RSAD2Q8WXG1 361 aa25.22■■□□□ 1.63
LSM7-204ENST00000587502 SAAL1Q96ER3 474 aa25.22■■□□□ 1.63
LSM7-204ENST00000587502 CHAMP1Q96JM3 812 aa25.22■■□□□ 1.63
LSM7-204ENST00000587502 ZNF560Q96MR9 790 aa25.22■■□□□ 1.63
LSM7-204ENST00000587502 FGFBP2Q9BYJ0 223 aa25.22■■□□□ 1.63
LSM7-204ENST00000587502 GDE1Q9NZC3 331 aa25.22■■□□□ 1.63
LSM7-204ENST00000587502 ATP6V1DQ9Y5K8 247 aa25.22■■□□□ 1.63
LSM7-204ENST00000587502 WDFY4Q6ZS81 3184 aa25.21■■□□□ 1.63
LSM7-204ENST00000587502 ANK1P16157 1881 aa25.21■■□□□ 1.63
LSM7-204ENST00000587502 MICAL2O94851 1124 aa25.21■■□□□ 1.63
LSM7-204ENST00000587502 PLD1Q13393 1074 aa25.21■■□□□ 1.63
LSM7-204ENST00000587502 FAM26FQ5R3K3 315 aa25.21■■□□□ 1.63
LSM7-204ENST00000587502 RNF19BQ6ZMZ0 732 aa25.21■■□□□ 1.63
LSM7-204ENST00000587502 EFCAB13Q8IY85 973 aa25.21■■□□□ 1.63
LSM7-204ENST00000587502 GPD1LQ8N335 351 aa25.21■■□□□ 1.63
LSM7-204ENST00000587502 LEMD2Q8NC56 503 aa25.21■■□□□ 1.63
LSM7-204ENST00000587502 ZNF512Q96ME7 567 aaPredicted RBP25.21■■□□□ 1.63
LSM7-204ENST00000587502 CBWD1Q9BRT8 395 aa25.21■■□□□ 1.63
LSM7-204ENST00000587502 NUMBLQ9Y6R0 609 aa25.21■■□□□ 1.63
LSM7-204ENST00000587502 UBE4BO95155 1302 aa25.2■■□□□ 1.62
LSM7-204ENST00000587502 PVALEFA0A1B0GWK0 134 aa25.2■■□□□ 1.62
LSM7-204ENST00000587502 SPTLC1O15269 473 aa25.2■■□□□ 1.62
LSM7-204ENST00000587502 PDGFBP01127 241 aaPredicted RBP25.2■■□□□ 1.62
LSM7-204ENST00000587502 CLCN5P51795 746 aa25.2■■□□□ 1.62
LSM7-204ENST00000587502 PTPN5P54829 565 aa25.2■■□□□ 1.62
LSM7-204ENST00000587502 SNRPFP62306 86 aaKnown RBP25.2■■□□□ 1.62
LSM7-204ENST00000587502 KRT85P78386 507 aa25.2■■□□□ 1.62
LSM7-204ENST00000587502 TFAMQ00059 246 aaKnown RBP25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms