RNA–Protein interactions for RNA: ENST00000577393.1

PPP4R1-204, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-204ENST00000577393 CCDC149Q6ZUS6 474 aa28.56■■■□□ 2.16
PPP4R1-204ENST00000577393 C1QTNF1Q9BXJ1 281 aa28.56■■■□□ 2.16
PPP4R1-204ENST00000577393 PIDD1Q9HB75 910 aa28.56■■■□□ 2.16
PPP4R1-204ENST00000577393 CLIC2O15247 247 aa28.55■■■□□ 2.16
PPP4R1-204ENST00000577393 ZNF202O95125 648 aa28.55■■■□□ 2.16
PPP4R1-204ENST00000577393 PAX3P23760 479 aa28.55■■■□□ 2.16
PPP4R1-204ENST00000577393 TFAMQ00059 246 aaKnown RBP28.55■■■□□ 2.16
PPP4R1-204ENST00000577393 STK4Q13043 487 aa28.55■■■□□ 2.16
PPP4R1-204ENST00000577393 PPM1LQ5SGD2 360 aa28.55■■■□□ 2.16
PPP4R1-204ENST00000577393 ZNF461Q8TAF7 563 aa28.55■■■□□ 2.16
PPP4R1-204ENST00000577393 SLC7A14Q8TBB6 771 aa28.55■■■□□ 2.16
PPP4R1-204ENST00000577393 PDE11AQ9HCR9 933 aa28.55■■■□□ 2.16
PPP4R1-204ENST00000577393 WDR6Q9NNW5 1121 aaKnown RBP28.55■■■□□ 2.16
PPP4R1-204ENST00000577393 USTQ9Y2C2 406 aa28.55■■■□□ 2.16
PPP4R1-204ENST00000577393 ZNF233A6NK53 670 aa28.54■■■□□ 2.16
PPP4R1-204ENST00000577393 OAZ2O95190 189 aa28.54■■■□□ 2.16
PPP4R1-204ENST00000577393 PRR29P0C7W0 189 aa28.54■■■□□ 2.16
PPP4R1-204ENST00000577393 SNRPFP62306 86 aaKnown RBP28.54■■■□□ 2.16
PPP4R1-204ENST00000577393 YWHAHQ04917 246 aaPredicted RBP28.54■■■□□ 2.16
PPP4R1-204ENST00000577393 PSMD2Q13200 908 aa28.54■■■□□ 2.16
PPP4R1-204ENST00000577393 KNOP1Q1ED39 458 aaKnown RBP28.54■■■□□ 2.16
PPP4R1-204ENST00000577393 UVSSAQ2YD98 709 aa28.54■■■□□ 2.16
PPP4R1-204ENST00000577393 CBWD2Q8IUF1 395 aa28.54■■■□□ 2.16
PPP4R1-204ENST00000577393 TDRD5Q8NAT2 981 aaKnown RBP28.54■■■□□ 2.16
PPP4R1-204ENST00000577393 KIAA0895Q8NCT3 520 aa28.54■■■□□ 2.16
PPP4R1-204ENST00000577393 SENP8Q96LD8 212 aa28.54■■■□□ 2.16
PPP4R1-204ENST00000577393 SCN1AP35498 2009 aa28.53■■■□□ 2.16
PPP4R1-204ENST00000577393 DENND4AQ7Z401 1863 aa28.53■■■□□ 2.16
PPP4R1-204ENST00000577393 WDR27A2RRH5 827 aa28.53■■■□□ 2.16
PPP4R1-204ENST00000577393 ABLIM3O94929 683 aa28.53■■■□□ 2.16
PPP4R1-204ENST00000577393 RPN1P04843 607 aaKnown RBP28.53■■■□□ 2.16
PPP4R1-204ENST00000577393 HNRNPA1P09651 372 aaKnown RBP eCLIP28.53■■■□□ 2.16
PPP4R1-204ENST00000577393 TYMPP19971 482 aa28.53■■■□□ 2.16
PPP4R1-204ENST00000577393 HS2ST1Q7LGA3 356 aa28.53■■■□□ 2.16
PPP4R1-204ENST00000577393 USP37Q86T82 979 aa28.53■■■□□ 2.16
PPP4R1-204ENST00000577393 CACTINQ8WUQ7 758 aaKnown RBP28.53■■■□□ 2.16
PPP4R1-204ENST00000577393 KIAA1586Q9HCI6 787 aa28.53■■■□□ 2.16
PPP4R1-204ENST00000577393 CLUHO75153 1309 aa28.52■■■□□ 2.16
PPP4R1-204ENST00000577393 GOLGA6L4A6NEF3 574 aa28.52■■■□□ 2.16
PPP4R1-204ENST00000577393 HOXA9P31269 272 aa28.52■■■□□ 2.16
PPP4R1-204ENST00000577393 TAF6P49848 677 aa28.52■■■□□ 2.16
PPP4R1-204ENST00000577393 OTOP3Q7RTS5 596 aa28.52■■■□□ 2.16
PPP4R1-204ENST00000577393 C1orf127Q8N9H9 656 aa28.52■■■□□ 2.16
PPP4R1-204ENST00000577393 FAM84AQ96KN4 292 aa28.52■■■□□ 2.16
PPP4R1-204ENST00000577393 CCL16O15467 120 aa28.51■■■□□ 2.15
PPP4R1-204ENST00000577393 ODC1P11926 461 aa28.51■■■□□ 2.15
PPP4R1-204ENST00000577393 CYP2J2P51589 502 aa28.51■■■□□ 2.15
PPP4R1-204ENST00000577393 DPYDQ12882 1025 aa28.51■■■□□ 2.15
PPP4R1-204ENST00000577393 RTL10Q7L3V2 364 aa28.51■■■□□ 2.15
PPP4R1-204ENST00000577393 ZDHHC14Q8IZN3 488 aa28.51■■■□□ 2.15
PPP4R1-204ENST00000577393 PLCD3Q8N3E9 789 aa28.51■■■□□ 2.15
PPP4R1-204ENST00000577393 RDH13Q8NBN7 331 aa28.51■■■□□ 2.15
PPP4R1-204ENST00000577393 ACSF2Q96CM8 615 aaPredicted RBP28.51■■■□□ 2.15
PPP4R1-204ENST00000577393 C11orf16Q9NQ32 467 aa28.51■■■□□ 2.15
PPP4R1-204ENST00000577393 CGNQ9P2M7 1197 aaKnown RBP28.51■■■□□ 2.15
PPP4R1-204ENST00000577393 FAM86C2PA6NEL3 165 aa28.5■■■□□ 2.15
PPP4R1-204ENST00000577393 ATF2P15336 505 aa28.5■■■□□ 2.15
PPP4R1-204ENST00000577393 POLR2BP30876 1174 aaKnown RBP28.5■■■□□ 2.15
PPP4R1-204ENST00000577393 ELF1P32519 619 aa28.5■■■□□ 2.15
PPP4R1-204ENST00000577393 SNRNP35Q16560 246 aaKnown RBP28.5■■■□□ 2.15
PPP4R1-204ENST00000577393 TPGS2Q68CL5 300 aa28.5■■■□□ 2.15
PPP4R1-204ENST00000577393 LMBRD2Q68DH5 695 aaPredicted RBP28.5■■■□□ 2.15
PPP4R1-204ENST00000577393 OVOS1Q6IE37 1185 aa28.5■■■□□ 2.15
PPP4R1-204ENST00000577393 C12orf56Q8IXR9 622 aa28.5■■■□□ 2.15
PPP4R1-204ENST00000577393 XXYLT1Q8NBI6 393 aa28.5■■■□□ 2.15
PPP4R1-204ENST00000577393 BORCS6Q96GS4 357 aa28.5■■■□□ 2.15
PPP4R1-204ENST00000577393 OXCT2Q9BYC2 517 aaPredicted RBP28.5■■■□□ 2.15
PPP4R1-204ENST00000577393 LIMD1Q9UGP4 676 aa28.5■■■□□ 2.15
PPP4R1-204ENST00000577393 AGAP1Q9UPQ3 857 aa28.5■■■□□ 2.15
PPP4R1-204ENST00000577393 ARHGEF37A1IGU5 675 aa28.49■■■□□ 2.15
PPP4R1-204ENST00000577393 XYLBO75191 536 aa28.49■■■□□ 2.15
PPP4R1-204ENST00000577393 ITGB3P05106 788 aa28.49■■■□□ 2.15
PPP4R1-204ENST00000577393 SURF1Q15526 300 aa28.49■■■□□ 2.15
PPP4R1-204ENST00000577393 TMEM31Q5JXX7 168 aa28.49■■■□□ 2.15
PPP4R1-204ENST00000577393 SCARA3Q6AZY7 606 aa28.49■■■□□ 2.15
PPP4R1-204ENST00000577393 GRASPQ7Z6J2 395 aaPredicted RBP28.49■■■□□ 2.15
PPP4R1-204ENST00000577393 FMR1NBQ8N0W7 255 aaPredicted RBP28.49■■■□□ 2.15
PPP4R1-204ENST00000577393 CCDC47Q96A33 483 aaKnown RBP28.49■■■□□ 2.15
PPP4R1-204ENST00000577393 ZNF560Q96MR9 790 aa28.49■■■□□ 2.15
PPP4R1-204ENST00000577393 MTMR12Q9C0I1 747 aa28.49■■■□□ 2.15
PPP4R1-204ENST00000577393 INTS13Q9NVM9 706 aa28.49■■■□□ 2.15
PPP4R1-204ENST00000577393 CIZ1Q9ULV3 898 aaPredicted RBP28.49■■■□□ 2.15
PPP4R1-204ENST00000577393 POLIQ9UNA4 740 aa28.49■■■□□ 2.15
PPP4R1-204ENST00000577393 DOCK6Q96HP0 2047 aa28.48■■■□□ 2.15
PPP4R1-204ENST00000577393 MYO10Q9HD67 2058 aa28.48■■■□□ 2.15
PPP4R1-204ENST00000577393 OR6C75A6NL08 312 aa28.48■■■□□ 2.15
PPP4R1-204ENST00000577393 CYB561D2O14569 222 aa28.48■■■□□ 2.15
PPP4R1-204ENST00000577393 PRRG1O14668 218 aa28.48■■■□□ 2.15
PPP4R1-204ENST00000577393 GPR37L1O60883 481 aa28.48■■■□□ 2.15
PPP4R1-204ENST00000577393 N4BP1O75113 896 aaKnown RBP28.48■■■□□ 2.15
PPP4R1-204ENST00000577393 RHOBTB3O94955 611 aa28.48■■■□□ 2.15
PPP4R1-204ENST00000577393 SEC24AO95486 1093 aa28.48■■■□□ 2.15
PPP4R1-204ENST00000577393 CYP11A1P05108 521 aa28.48■■■□□ 2.15
PPP4R1-204ENST00000577393 TMEM191BP0C7N4 346 aa28.48■■■□□ 2.15
PPP4R1-204ENST00000577393 CPB1P15086 417 aa28.48■■■□□ 2.15
PPP4R1-204ENST00000577393 PNPLA4P41247 253 aa28.48■■■□□ 2.15
PPP4R1-204ENST00000577393 SV2CQ496J9 727 aa28.48■■■□□ 2.15
PPP4R1-204ENST00000577393 CSGALNACT2Q8N6G5 542 aa28.48■■■□□ 2.15
PPP4R1-204ENST00000577393 CXorf38Q8TB03 319 aa28.48■■■□□ 2.15
PPP4R1-204ENST00000577393 GOLGA5Q8TBA6 731 aa28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms