RNA–Protein interactions for RNA: ENST00000566624.5

RPL4-213, Transcript of ribosomal protein L4, human

TSL 2

Gene RPL4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPL4-213	ENST00000566624	DGAT1	O75907	488 aa		11.77	□□□□□ -0.53
RPL4-213	ENST00000566624	PRAMEF12	O95522	483 aa		11.77	□□□□□ -0.53
RPL4-213	ENST00000566624	IRX4	P78413	519 aa		11.77	□□□□□ -0.53
RPL4-213	ENST00000566624	FGD1	P98174	961 aa		11.77	□□□□□ -0.53
RPL4-213	ENST00000566624	ELF2	Q15723	593 aa		11.77	□□□□□ -0.53
RPL4-213	ENST00000566624	FAM187B	Q17R55	369 aa		11.77	□□□□□ -0.53
RPL4-213	ENST00000566624	COL28A1	Q2UY09	1125 aa		11.77	□□□□□ -0.53
RPL4-213	ENST00000566624	TMEM196	Q5HYL7	178 aa		11.77	□□□□□ -0.53
RPL4-213	ENST00000566624	RNF19B	Q6ZMZ0	732 aa		11.77	□□□□□ -0.53
RPL4-213	ENST00000566624	TPH2	Q8IWU9	490 aa		11.77	□□□□□ -0.53
RPL4-213	ENST00000566624	BLID	Q8IZY5	108 aa		11.77	□□□□□ -0.53
RPL4-213	ENST00000566624	ELMOD1	Q8N336	334 aa		11.77	□□□□□ -0.53
RPL4-213	ENST00000566624	CAMKK1	Q8N5S9	505 aa		11.77	□□□□□ -0.53
RPL4-213	ENST00000566624	LEMD2	Q8NC56	503 aa		11.77	□□□□□ -0.53
RPL4-213	ENST00000566624	PRIMPOL	Q96LW4	560 aa		11.77	□□□□□ -0.53
RPL4-213	ENST00000566624	TMEM209	Q96SK2	561 aa		11.77	□□□□□ -0.53
RPL4-213	ENST00000566624	C22orf23	Q9BZE7	217 aa		11.77	□□□□□ -0.53
RPL4-213	ENST00000566624	GPR88	Q9GZN0	384 aa		11.77	□□□□□ -0.53
RPL4-213	ENST00000566624	CRISPLD1	Q9H336	500 aa		11.77	□□□□□ -0.53
RPL4-213	ENST00000566624	NCOA5	Q9HCD5	579 aa	Known RBP	11.77	□□□□□ -0.53
RPL4-213	ENST00000566624	FBRSL1	Q9HCM7	1045 aa	Known RBP	11.77	□□□□□ -0.53
RPL4-213	ENST00000566624	PRMT7	Q9NVM4	692 aa	Predicted RBP	11.77	□□□□□ -0.53
RPL4-213	ENST00000566624	AFF4	Q9UHB7	1163 aa	Known RBP	11.77	□□□□□ -0.53
RPL4-213	ENST00000566624	INVS	Q9Y283	1065 aa		11.77	□□□□□ -0.53
RPL4-213	ENST00000566624	YIPF1	Q9Y548	306 aa		11.77	□□□□□ -0.53
RPL4-213	ENST00000566624	MEFV	O15553	781 aa	Predicted RBP	11.76	□□□□□ -0.53
RPL4-213	ENST00000566624	RNF40	O75150	1001 aa		11.76	□□□□□ -0.53
RPL4-213	ENST00000566624	RHOBTB1	O94844	696 aa		11.76	□□□□□ -0.53
RPL4-213	ENST00000566624	EGF	P01133	1207 aa		11.76	□□□□□ -0.53
RPL4-213	ENST00000566624	IFNAR1	P17181	557 aa		11.76	□□□□□ -0.53
RPL4-213	ENST00000566624	RARRES1	P49788	294 aa		11.76	□□□□□ -0.53
RPL4-213	ENST00000566624	AKAP17A	Q02040	695 aa	Known RBP	11.76	□□□□□ -0.53
RPL4-213	ENST00000566624	UAP1L1	Q3KQV9	507 aa		11.76	□□□□□ -0.53
RPL4-213	ENST00000566624	TSGA10IP	Q3SY00	556 aa		11.76	□□□□□ -0.53
RPL4-213	ENST00000566624	CTXN3	Q4LDR2	81 aa		11.76	□□□□□ -0.53
RPL4-213	ENST00000566624	ARHGAP29	Q52LW3	1261 aa		11.76	□□□□□ -0.53
RPL4-213	ENST00000566624	NAIF1	Q69YI7	327 aa	Predicted RBP	11.76	□□□□□ -0.53
RPL4-213	ENST00000566624	GAREM2	Q75VX8	874 aa		11.76	□□□□□ -0.53
RPL4-213	ENST00000566624	MAEA	Q7L5Y9	396 aa		11.76	□□□□□ -0.53
RPL4-213	ENST00000566624	DAGLB	Q8NCG7	672 aa		11.76	□□□□□ -0.53
RPL4-213	ENST00000566624	BSND	Q8WZ55	320 aa		11.76	□□□□□ -0.53
RPL4-213	ENST00000566624	BRF1	Q92994	677 aa		11.76	□□□□□ -0.53
RPL4-213	ENST00000566624	UROC1	Q96N76	676 aa		11.76	□□□□□ -0.53
RPL4-213	ENST00000566624	CCDC113	Q9H0I3	377 aa		11.76	□□□□□ -0.53
RPL4-213	ENST00000566624	MAST4	O15021	2626 aa		11.76	□□□□□ -0.53
RPL4-213	ENST00000566624	NUP205	Q92621	2012 aa		11.76	□□□□□ -0.53
RPL4-213	ENST00000566624	NUP210	Q8TEM1	1887 aa	Predicted RBP	11.75	□□□□□ -0.53
RPL4-213	ENST00000566624	SMIM28	A0A1B0GU29	152 aa		11.75	□□□□□ -0.53
RPL4-213	ENST00000566624	FAM221B	A6H8Z2	402 aa		11.75	□□□□□ -0.53
RPL4-213	ENST00000566624	KHNYN	O15037	678 aa	Known RBP	11.75	□□□□□ -0.53
RPL4-213	ENST00000566624	LYPLA2	O95372	231 aa		11.75	□□□□□ -0.53
RPL4-213	ENST00000566624	PRPF4B	Q13523	1007 aa	Known RBP	11.75	□□□□□ -0.53
RPL4-213	ENST00000566624	ITPRIPL2	Q3MIP1	535 aa		11.75	□□□□□ -0.53
RPL4-213	ENST00000566624	RNF20	Q5VTR2	975 aa		11.75	□□□□□ -0.53
RPL4-213	ENST00000566624	PMS2CL	Q68D20	193 aa		11.75	□□□□□ -0.53
RPL4-213	ENST00000566624	PPP4R3A	Q6IN85	833 aa		11.75	□□□□□ -0.53
RPL4-213	ENST00000566624		Q6ZUG5	572 aa		11.75	□□□□□ -0.53
RPL4-213	ENST00000566624	PIP4P1	Q86T03	277 aa		11.75	□□□□□ -0.53
RPL4-213	ENST00000566624	PIGO	Q8TEQ8	1089 aa		11.75	□□□□□ -0.53
RPL4-213	ENST00000566624	ZMAT2	Q96NC0	199 aa	Known RBP	11.75	□□□□□ -0.53
RPL4-213	ENST00000566624	AIFM3	Q96NN9	605 aa		11.75	□□□□□ -0.53
RPL4-213	ENST00000566624	HSD17B14	Q9BPX1	270 aa		11.75	□□□□□ -0.53
RPL4-213	ENST00000566624	EIF2AK1	Q9BQI3	630 aa	Known RBP	11.75	□□□□□ -0.53
RPL4-213	ENST00000566624	HPS4	Q9NQG7	708 aa		11.75	□□□□□ -0.53
RPL4-213	ENST00000566624	ANKEF1	Q9NU02	776 aa		11.75	□□□□□ -0.53
RPL4-213	ENST00000566624	TRIP11	Q15643	1979 aa		11.75	□□□□□ -0.53
RPL4-213	ENST00000566624	ATG2B	Q96BY7	2078 aa		11.74	□□□□□ -0.53
RPL4-213	ENST00000566624	ASCC3	Q8N3C0	2202 aa	Known RBP	11.74	□□□□□ -0.53
RPL4-213	ENST00000566624		H7C4K7	107 aa		11.74	□□□□□ -0.53
RPL4-213	ENST00000566624	PODXL	O00592	558 aa		11.74	□□□□□ -0.53
RPL4-213	ENST00000566624	TRDMT1	O14717	391 aa	Known RBP	11.74	□□□□□ -0.53
RPL4-213	ENST00000566624	SYN3	O14994	580 aa		11.74	□□□□□ -0.53
RPL4-213	ENST00000566624	USO1	O60763	962 aa	Known RBP	11.74	□□□□□ -0.53
RPL4-213	ENST00000566624	ATG13	O75143	517 aa		11.74	□□□□□ -0.53
RPL4-213	ENST00000566624	BCKDHB	P21953	392 aa		11.74	□□□□□ -0.53
RPL4-213	ENST00000566624	FAM193A	P78312	1265 aa		11.74	□□□□□ -0.53
RPL4-213	ENST00000566624	CCT2	P78371	535 aa	Known RBP	11.74	□□□□□ -0.53
RPL4-213	ENST00000566624	SIM1	P81133	766 aa	Predicted RBP	11.74	□□□□□ -0.53
RPL4-213	ENST00000566624	ALKAL1	Q6UXT8	129 aa		11.74	□□□□□ -0.53
RPL4-213	ENST00000566624	TMEM130	Q8N3G9	435 aa		11.74	□□□□□ -0.53
RPL4-213	ENST00000566624	CHCHD4	Q8N4Q1	142 aa		11.74	□□□□□ -0.53
RPL4-213	ENST00000566624	CEP120	Q8N960	986 aa		11.74	□□□□□ -0.53
RPL4-213	ENST00000566624	BEST2	Q8NFU1	509 aa		11.74	□□□□□ -0.53
RPL4-213	ENST00000566624	ADAM32	Q8TC27	787 aa		11.74	□□□□□ -0.53
RPL4-213	ENST00000566624	BPIFB1	Q8TDL5	484 aa		11.74	□□□□□ -0.53
RPL4-213	ENST00000566624	EZH1	Q92800	747 aa	Predicted RBP	11.74	□□□□□ -0.53
RPL4-213	ENST00000566624	POLR3C	Q9BUI4	534 aa	Predicted RBP	11.74	□□□□□ -0.53
RPL4-213	ENST00000566624	SMG9	Q9H0W8	520 aa	Known RBP	11.74	□□□□□ -0.53
RPL4-213	ENST00000566624	OBP2A	Q9NY56	170 aa		11.74	□□□□□ -0.53
RPL4-213	ENST00000566624	CACNA1E	Q15878	2313 aa		11.74	□□□□□ -0.53
RPL4-213	ENST00000566624	CCDC194	A0A1B0GVG4	234 aa		11.73	□□□□□ -0.53
RPL4-213	ENST00000566624	ACKR2	O00590	384 aa		11.73	□□□□□ -0.53
RPL4-213	ENST00000566624	CCNT1	O60563	726 aa	Known RBP	11.73	□□□□□ -0.53
RPL4-213	ENST00000566624	OR4Q2	P0C623	313 aa		11.73	□□□□□ -0.53
RPL4-213	ENST00000566624	LIG1	P18858	919 aa		11.73	□□□□□ -0.53
RPL4-213	ENST00000566624	U2AF2	P26368	475 aa	Known RBP eCLIP	11.73	□□□□□ -0.53
RPL4-213	ENST00000566624	GBP1	P32455	592 aa		11.73	□□□□□ -0.53
RPL4-213	ENST00000566624	SCAP	Q12770	1279 aa		11.73	□□□□□ -0.53
RPL4-213	ENST00000566624	GRSF1	Q12849	480 aa	Known RBP eCLIP	11.73	□□□□□ -0.53	1e-10	■□□□□ 8.8
RPL4-213	ENST00000566624	KARS	Q15046	597 aa	Known RBP	11.73	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms