RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 FEM1BQ9UK73 627 aa10.77□□□□□ -0.69
SMARCC2-209ENST00000550164 ASTN1O14525 1302 aa10.77□□□□□ -0.69
SMARCC2-209ENST00000550164 APRTP07741 180 aa10.77□□□□□ -0.69
SMARCC2-209ENST00000550164 NUDT17P0C025 328 aa10.77□□□□□ -0.69
SMARCC2-209ENST00000550164 SFNP31947 248 aa10.77□□□□□ -0.69
SMARCC2-209ENST00000550164 ROR1Q01973 937 aa10.77□□□□□ -0.69
SMARCC2-209ENST00000550164 RRP1BQ14684 758 aaKnown RBP10.77□□□□□ -0.69
SMARCC2-209ENST00000550164 NOP9Q86U38 636 aaKnown RBP10.77□□□□□ -0.69
SMARCC2-209ENST00000550164 AFAP1L2Q8N4X5 818 aa10.77□□□□□ -0.69
SMARCC2-209ENST00000550164 DDX56Q9NY93 547 aaKnown RBP10.77□□□□□ -0.69
SMARCC2-209ENST00000550164 CHD2O14647 1828 aaKnown RBP10.77□□□□□ -0.69
SMARCC2-209ENST00000550164 PIK3R2O00459 728 aa10.77□□□□□ -0.69
SMARCC2-209ENST00000550164 GPC4O75487 556 aa10.77□□□□□ -0.69
SMARCC2-209ENST00000550164 SLITRK3O94933 977 aa10.77□□□□□ -0.69
SMARCC2-209ENST00000550164 HSPA4LO95757 839 aa10.77□□□□□ -0.69
SMARCC2-209ENST00000550164 ZCCHC18P0CG32 403 aa10.77□□□□□ -0.69
SMARCC2-209ENST00000550164 SHMT1P34896 483 aa10.77□□□□□ -0.69
SMARCC2-209ENST00000550164 BCAR1P56945 870 aa10.77□□□□□ -0.69
SMARCC2-209ENST00000550164 SATB1Q01826 763 aa10.77□□□□□ -0.69
SMARCC2-209ENST00000550164 TNFAIP1Q13829 316 aa10.77□□□□□ -0.69
SMARCC2-209ENST00000550164 ARSHQ5FYA8 562 aa10.77□□□□□ -0.69
SMARCC2-209ENST00000550164 PCNX4Q63HM2 1172 aa10.77□□□□□ -0.69
SMARCC2-209ENST00000550164 ARID3BQ8IVW6 561 aaPredicted RBP10.77□□□□□ -0.69
SMARCC2-209ENST00000550164 TMEM143Q96AN5 459 aa10.77□□□□□ -0.69
SMARCC2-209ENST00000550164 MXRA8Q9BRK3 442 aa10.77□□□□□ -0.69
SMARCC2-209ENST00000550164 RAB6BQ9NRW1 208 aa10.77□□□□□ -0.69
SMARCC2-209ENST00000550164 STRIP2Q9ULQ0 834 aa10.77□□□□□ -0.69
SMARCC2-209ENST00000550164 SLC4A7Q9Y6M7 1214 aa10.77□□□□□ -0.69
SMARCC2-209ENST00000550164 SPATA31A1Q5TZJ5 1347 aa10.76□□□□□ -0.69
SMARCC2-209ENST00000550164 PPP1R12AO14974 1030 aaPredicted RBP10.76□□□□□ -0.69
SMARCC2-209ENST00000550164 CRCPO75575 148 aa10.76□□□□□ -0.69
SMARCC2-209ENST00000550164 CALCAP01258 141 aa10.76□□□□□ -0.69
SMARCC2-209ENST00000550164 MMP13P45452 471 aa10.76□□□□□ -0.69
SMARCC2-209ENST00000550164 GEMIN4P57678 1058 aaKnown RBP10.76□□□□□ -0.69
SMARCC2-209ENST00000550164 DLG4P78352 724 aa10.76□□□□□ -0.69
SMARCC2-209ENST00000550164 ZNF200P98182 395 aaPredicted RBP10.76□□□□□ -0.69
SMARCC2-209ENST00000550164 XRCC4Q13426 336 aa10.76□□□□□ -0.69
SMARCC2-209ENST00000550164 Q4G0T1 1027 aa10.76□□□□□ -0.69
SMARCC2-209ENST00000550164 HHIPL2Q6UWX4 724 aa10.76□□□□□ -0.69
SMARCC2-209ENST00000550164 DCLK2Q8N568 766 aa10.76□□□□□ -0.69
SMARCC2-209ENST00000550164 CEP70Q8NHQ1 597 aa10.76□□□□□ -0.69
SMARCC2-209ENST00000550164 FEZF2Q8TBJ5 459 aa10.76□□□□□ -0.69
SMARCC2-209ENST00000550164 ALKBH8Q96BT7 664 aaKnown RBP10.76□□□□□ -0.69
SMARCC2-209ENST00000550164 AGBL1Q96MI9 1066 aa10.76□□□□□ -0.69
SMARCC2-209ENST00000550164 RIT2Q99578 217 aa10.76□□□□□ -0.69
SMARCC2-209ENST00000550164 TMEM121Q9BTD3 319 aa10.76□□□□□ -0.69
SMARCC2-209ENST00000550164 MYLK2Q9H1R3 596 aa10.76□□□□□ -0.69
SMARCC2-209ENST00000550164 DCLRE1BQ9H816 532 aa10.76□□□□□ -0.69
SMARCC2-209ENST00000550164 PCDHA3Q9Y5H8 950 aa10.76□□□□□ -0.69
SMARCC2-209ENST00000550164 RBP3P10745 1247 aa10.76□□□□□ -0.69
SMARCC2-209ENST00000550164 RANBP1P43487 201 aa10.76□□□□□ -0.69
SMARCC2-209ENST00000550164 TMED1Q13445 227 aa10.76□□□□□ -0.69
SMARCC2-209ENST00000550164 ART3Q13508 389 aa10.76□□□□□ -0.69
SMARCC2-209ENST00000550164 SEPT6Q14141 434 aa10.76□□□□□ -0.69
SMARCC2-209ENST00000550164 HIC1Q14526 733 aa10.76□□□□□ -0.69
SMARCC2-209ENST00000550164 KIF22Q14807 665 aa10.76□□□□□ -0.69
SMARCC2-209ENST00000550164 FAM102AQ5T9C2 384 aaPredicted RBP10.76□□□□□ -0.69
SMARCC2-209ENST00000550164 RC3H1Q5TC82 1133 aaKnown RBP10.76□□□□□ -0.69
SMARCC2-209ENST00000550164 AEBP2Q6ZN18 517 aaPredicted RBP10.76□□□□□ -0.69
SMARCC2-209ENST00000550164 CEP120Q8N960 986 aa10.76□□□□□ -0.69
SMARCC2-209ENST00000550164 SPDYE1Q8NFV5 336 aaPredicted RBP10.76□□□□□ -0.69
SMARCC2-209ENST00000550164 ACER1Q8TDN7 264 aa10.76□□□□□ -0.69
SMARCC2-209ENST00000550164 ZNF384Q8TF68 577 aa10.76□□□□□ -0.69
SMARCC2-209ENST00000550164 CCT6BQ92526 530 aa10.76□□□□□ -0.69
SMARCC2-209ENST00000550164 TRIM56Q9BRZ2 755 aaKnown RBP10.76□□□□□ -0.69
SMARCC2-209ENST00000550164 ZHX2Q9Y6X8 837 aa10.76□□□□□ -0.69
SMARCC2-209ENST00000550164 ATXN2Q99700 1313 aaKnown RBP10.76□□□□□ -0.69
SMARCC2-209ENST00000550164 MRC1P22897 1456 aa10.76□□□□□ -0.69
SMARCC2-209ENST00000550164 APBA3O96018 575 aa10.76□□□□□ -0.69
SMARCC2-209ENST00000550164 KRT16P08779 473 aa10.76□□□□□ -0.69
SMARCC2-209ENST00000550164 PPP3CAQ08209 521 aa10.76□□□□□ -0.69
SMARCC2-209ENST00000550164 NCOA4Q13772 614 aa10.76□□□□□ -0.69
SMARCC2-209ENST00000550164 PKN2Q16513 984 aaKnown RBP10.76□□□□□ -0.69
SMARCC2-209ENST00000550164 ASTE1Q2TB18 679 aaPredicted RBP10.76□□□□□ -0.69
SMARCC2-209ENST00000550164 FAM160B1Q5W0V3 765 aa10.76□□□□□ -0.69
SMARCC2-209ENST00000550164 SESTD1Q86VW0 696 aa10.76□□□□□ -0.69
SMARCC2-209ENST00000550164 LRRC57Q8N9N7 239 aa10.76□□□□□ -0.69
SMARCC2-209ENST00000550164 CKAP2Q8WWK9 683 aa10.76□□□□□ -0.69
SMARCC2-209ENST00000550164 APOL6Q9BWW8 343 aa10.76□□□□□ -0.69
SMARCC2-209ENST00000550164 SHCBP1LQ9BZQ2 653 aa10.76□□□□□ -0.69
SMARCC2-209ENST00000550164 RNF146Q9NTX7 359 aa10.76□□□□□ -0.69
SMARCC2-209ENST00000550164 MCM8Q9UJA3 840 aa10.76□□□□□ -0.69
SMARCC2-209ENST00000550164 TBX20Q9UMR3 447 aa10.76□□□□□ -0.69
SMARCC2-209ENST00000550164 GNAT1P11488 350 aa10.75□□□□□ -0.69
SMARCC2-209ENST00000550164 RPS6KA2Q15349 733 aa10.75□□□□□ -0.69
SMARCC2-209ENST00000550164 SV2AQ7L0J3 742 aa10.75□□□□□ -0.69
SMARCC2-209ENST00000550164 C1orf131Q8NDD1 294 aaKnown RBP10.75□□□□□ -0.69
SMARCC2-209ENST00000550164 MASTLQ96GX5 879 aa10.75□□□□□ -0.69
SMARCC2-209ENST00000550164 DCLK3Q9C098 648 aa10.75□□□□□ -0.69
SMARCC2-209ENST00000550164 ASNSD1Q9NWL6 643 aa10.75□□□□□ -0.69
SMARCC2-209ENST00000550164 MTO1Q9Y2Z2 717 aaKnown RBP10.75□□□□□ -0.69
SMARCC2-209ENST00000550164 TMEM150BA6NC51 233 aa10.75□□□□□ -0.69
SMARCC2-209ENST00000550164 DDTLA6NHG4 134 aaPredicted RBP10.75□□□□□ -0.69
SMARCC2-209ENST00000550164 FOXO6A8MYZ6 492 aa10.75□□□□□ -0.69
SMARCC2-209ENST00000550164 ARL4AP40617 200 aa10.75□□□□□ -0.69
SMARCC2-209ENST00000550164 ZCWPW2Q504Y3 356 aa10.75□□□□□ -0.69
SMARCC2-209ENST00000550164 SPDYCQ5MJ68 293 aa10.75□□□□□ -0.69
SMARCC2-209ENST00000550164 CYP4A22Q5TCH4 519 aa10.75□□□□□ -0.69
SMARCC2-209ENST00000550164 KRT80Q6KB66 452 aa10.75□□□□□ -0.69
SMARCC2-209ENST00000550164 ZNF572Q7Z3I7 529 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms