RNA–Protein interactions for RNA: ENST00000526527.1

COPB1-205, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-205ENST00000526527 IP6K2Q9UHH9 426 aa3.81□□□□□ -1.8
COPB1-205ENST00000526527 PCDHGA2Q9Y5H1 932 aa3.81□□□□□ -1.8
COPB1-205ENST00000526527 ARHGEF17Q96PE2 2063 aaPredicted RBP3.81□□□□□ -1.8
COPB1-205ENST00000526527 CCDC88BA6NC98 1476 aa3.8□□□□□ -1.8
COPB1-205ENST00000526527 SALL3Q9BXA9 1300 aa3.8□□□□□ -1.8
COPB1-205ENST00000526527 CCDC194A0A1B0GVG4 234 aa3.8□□□□□ -1.8
COPB1-205ENST00000526527 DNAJC9-AS1A6NH13 148 aa3.8□□□□□ -1.8
COPB1-205ENST00000526527 MARCH11A6NNE9 402 aa3.8□□□□□ -1.8
COPB1-205ENST00000526527 TBKBP1A7MCY6 615 aa3.8□□□□□ -1.8
COPB1-205ENST00000526527 AKAP10O43572 662 aa3.8□□□□□ -1.8
COPB1-205ENST00000526527 SGTAO43765 313 aa3.8□□□□□ -1.8
COPB1-205ENST00000526527 RRP9O43818 475 aaKnown RBP3.8□□□□□ -1.8
COPB1-205ENST00000526527 OFD1O75665 1012 aa3.8□□□□□ -1.8
COPB1-205ENST00000526527 RFPL1O75677 317 aa3.8□□□□□ -1.8
COPB1-205ENST00000526527 ESRRBO95718 433 aa3.8□□□□□ -1.8
COPB1-205ENST00000526527 PF4V1P10720 104 aa3.8□□□□□ -1.8
COPB1-205ENST00000526527 IL2RBP14784 551 aa3.8□□□□□ -1.8
COPB1-205ENST00000526527 CTSSP25774 331 aa3.8□□□□□ -1.8
COPB1-205ENST00000526527 MPLP40238 635 aa3.8□□□□□ -1.8
COPB1-205ENST00000526527 MCAMP43121 646 aa3.8□□□□□ -1.8
COPB1-205ENST00000526527 RESTQ13127 1097 aa3.8□□□□□ -1.8
COPB1-205ENST00000526527 NOMO1Q15155 1222 aa3.8□□□□□ -1.8
COPB1-205ENST00000526527 PCBP2Q15366 365 aaKnown RBP eCLIP3.8□□□□□ -1.8
COPB1-205ENST00000526527 LCE1EQ5T753 118 aa3.8□□□□□ -1.8
COPB1-205ENST00000526527 FAM102AQ5T9C2 384 aaPredicted RBP3.8□□□□□ -1.8
COPB1-205ENST00000526527 EFCAB12Q6NXP0 572 aa3.8□□□□□ -1.8
COPB1-205ENST00000526527 RSPH3Q86UC2 560 aa3.8□□□□□ -1.8
COPB1-205ENST00000526527 LYSMD2Q8IV50 215 aa3.8□□□□□ -1.8
COPB1-205ENST00000526527 CHPFQ8IZ52 775 aa3.8□□□□□ -1.8
COPB1-205ENST00000526527 OR7D4Q8NG98 312 aa3.8□□□□□ -1.8
COPB1-205ENST00000526527 RIN2Q8WYP3 895 aaPredicted RBP3.8□□□□□ -1.8
COPB1-205ENST00000526527 WASF1Q92558 559 aa3.8□□□□□ -1.8
COPB1-205ENST00000526527 NEU1Q99519 415 aa3.8□□□□□ -1.8
COPB1-205ENST00000526527 KRTAP2-2Q9BYT5 123 aa3.8□□□□□ -1.8
COPB1-205ENST00000526527 SLC29A3Q9BZD2 475 aa3.8□□□□□ -1.8
COPB1-205ENST00000526527 SENP6Q9GZR1 1112 aaPredicted RBP3.8□□□□□ -1.8
COPB1-205ENST00000526527 KMT5AQ9NQR1 393 aa3.8□□□□□ -1.8
COPB1-205ENST00000526527 KLHL42Q9P2K6 505 aa3.8□□□□□ -1.8
COPB1-205ENST00000526527 G3BP2Q9UN86 482 aaKnown RBP3.8□□□□□ -1.8
COPB1-205ENST00000526527 USP15Q9Y4E8 981 aaPredicted RBP3.8□□□□□ -1.8
COPB1-205ENST00000526527 CFAP20Q9Y6A4 193 aaKnown RBP3.8□□□□□ -1.8
COPB1-205ENST00000526527 EID1Q9Y6B2 187 aa3.8□□□□□ -1.8
COPB1-205ENST00000526527 KIF21AQ7Z4S6 1674 aa3.8□□□□□ -1.8
COPB1-205ENST00000526527 B5MCH6 92 aa3.79□□□□□ -1.8
COPB1-205ENST00000526527 SLC16A6O15403 523 aa3.79□□□□□ -1.8
COPB1-205ENST00000526527 ABLIM3O94929 683 aa3.79□□□□□ -1.8
COPB1-205ENST00000526527 ARIH2O95376 493 aa3.79□□□□□ -1.8
COPB1-205ENST00000526527 MAP4K4O95819 1239 aaPredicted RBP3.79□□□□□ -1.8
COPB1-205ENST00000526527 HLA-DOAP06340 250 aa3.79□□□□□ -1.8
COPB1-205ENST00000526527 SPATA31D3P0C874 917 aa3.79□□□□□ -1.8
COPB1-205ENST00000526527 ITGAMP11215 1152 aa3.79□□□□□ -1.8
COPB1-205ENST00000526527 MGAT1P26572 445 aa3.79□□□□□ -1.8
COPB1-205ENST00000526527 WASP42768 502 aa3.79□□□□□ -1.8
COPB1-205ENST00000526527 TNNT2P45379 298 aaPredicted RBP3.79□□□□□ -1.8
COPB1-205ENST00000526527 MMP14P50281 582 aa3.79□□□□□ -1.8
COPB1-205ENST00000526527 RAB27AP51159 221 aa3.79□□□□□ -1.8
COPB1-205ENST00000526527 IRX3P78415 501 aaPredicted RBP3.79□□□□□ -1.8
COPB1-205ENST00000526527 BLOC1S1P78537 153 aa3.79□□□□□ -1.8
COPB1-205ENST00000526527 GTF2H3Q13889 308 aa3.79□□□□□ -1.8
COPB1-205ENST00000526527 RAB39AQ14964 217 aa3.79□□□□□ -1.8
COPB1-205ENST00000526527 BMT2Q1RMZ1 405 aa3.79□□□□□ -1.8
COPB1-205ENST00000526527 L1TD1Q5T7N2 865 aaKnown RBP3.79□□□□□ -1.8
COPB1-205ENST00000526527 TAF3Q5VWG9 929 aa3.79□□□□□ -1.8
COPB1-205ENST00000526527 ABHD15Q6UXT9 468 aa3.79□□□□□ -1.8
COPB1-205ENST00000526527 SPATA31D4Q6ZUB0 917 aa3.79□□□□□ -1.8
COPB1-205ENST00000526527 SLC44A3Q8N4M1 653 aa3.79□□□□□ -1.8
COPB1-205ENST00000526527 PPM1NQ8N819 430 aa3.79□□□□□ -1.8
COPB1-205ENST00000526527 MDM1Q8TC05 714 aa3.79□□□□□ -1.8
COPB1-205ENST00000526527 JPH3Q8WXH2 748 aaPredicted RBP3.79□□□□□ -1.8
COPB1-205ENST00000526527 TFAP2CQ92754 450 aa3.79□□□□□ -1.8
COPB1-205ENST00000526527 MTFMTQ96DP5 389 aaKnown RBP3.79□□□□□ -1.8
COPB1-205ENST00000526527 CEP95Q96GE4 821 aa3.79□□□□□ -1.8
COPB1-205ENST00000526527 AIFM3Q96NN9 605 aa3.79□□□□□ -1.8
COPB1-205ENST00000526527 TSPAN18Q96SJ8 248 aa3.79□□□□□ -1.8
COPB1-205ENST00000526527 MAP3K14Q99558 947 aa3.79□□□□□ -1.8
COPB1-205ENST00000526527 TDP1Q9NUW8 608 aa3.79□□□□□ -1.8
COPB1-205ENST00000526527 GPRC5DQ9NZD1 345 aa3.79□□□□□ -1.8
COPB1-205ENST00000526527 RNF181Q9P0P0 153 aa3.79□□□□□ -1.8
COPB1-205ENST00000526527 SWAP70Q9UH65 585 aa3.79□□□□□ -1.8
COPB1-205ENST00000526527 PNMA2Q9UL42 364 aa3.79□□□□□ -1.8
COPB1-205ENST00000526527 INTUQ9ULD6 942 aa3.79□□□□□ -1.8
COPB1-205ENST00000526527 FPGT-TNNI3KV9GXZ4 949 aa3.79□□□□□ -1.8
COPB1-205ENST00000526527 THOC2Q8NI27 1593 aaKnown RBP3.78□□□□□ -1.8
COPB1-205ENST00000526527 FZD9O00144 591 aa3.78□□□□□ -1.8
COPB1-205ENST00000526527 TCERG1O14776 1098 aaKnown RBP3.78□□□□□ -1.8
COPB1-205ENST00000526527 ERC2O15083 957 aa3.78□□□□□ -1.8
COPB1-205ENST00000526527 ZNF500O60304 480 aaPredicted RBP3.78□□□□□ -1.8
COPB1-205ENST00000526527 TMEM127O75204 238 aa3.78□□□□□ -1.8
COPB1-205ENST00000526527 GPR32O75388 356 aa3.78□□□□□ -1.8
COPB1-205ENST00000526527 ITGA10O75578 1167 aa3.78□□□□□ -1.8
COPB1-205ENST00000526527 SCGB1D2O95969 90 aa3.78□□□□□ -1.8
COPB1-205ENST00000526527 HSP90AB1P08238 724 aaKnown RBP3.78□□□□□ -1.8
COPB1-205ENST00000526527 SNRPA1P09661 255 aaKnown RBP3.78□□□□□ -1.8
COPB1-205ENST00000526527 GSPT1P15170 499 aaKnown RBP3.78□□□□□ -1.8
COPB1-205ENST00000526527 HOXB6P17509 224 aaKnown RBP3.78□□□□□ -1.8
COPB1-205ENST00000526527 C5AR1P21730 350 aa3.78□□□□□ -1.8
COPB1-205ENST00000526527 PAX3P23760 479 aa3.78□□□□□ -1.8
COPB1-205ENST00000526527 ADSLP30566 484 aaPredicted RBP3.78□□□□□ -1.8
COPB1-205ENST00000526527 PTPN7P35236 360 aa3.78□□□□□ -1.8
COPB1-205ENST00000526527 FLT3LGP49771 235 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms