RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 TRADDQ15628 312 aa27.58■■■□□ 2.01
COL13A1-214ENST00000522165 ZBTB9Q96C00 473 aa27.58■■■□□ 2.01
COL13A1-214ENST00000522165 C11orf70Q9BRQ4 267 aa27.58■■■□□ 2.01
COL13A1-214ENST00000522165 WEE2P0C1S8 567 aa27.58■■■□□ 2.01
COL13A1-214ENST00000522165 PPP2R5EQ16537 467 aa27.58■■■□□ 2.01
COL13A1-214ENST00000522165 KYAT1Q16773 422 aa27.58■■■□□ 2.01
COL13A1-214ENST00000522165 MAATS1Q7Z4T9 603 aa27.58■■■□□ 2.01
COL13A1-214ENST00000522165 PHLDB2Q86SQ0 1253 aa27.58■■■□□ 2.01
COL13A1-214ENST00000522165 C1orf127Q8N9H9 656 aa27.58■■■□□ 2.01
COL13A1-214ENST00000522165 EIF1ADQ8N9N8 165 aaKnown RBP27.58■■■□□ 2.01
COL13A1-214ENST00000522165 CCDC102AQ96A19 550 aa27.58■■■□□ 2.01
COL13A1-214ENST00000522165 TRIM7Q9C029 511 aa27.58■■■□□ 2.01
COL13A1-214ENST00000522165 ASB7Q9H672 318 aa27.58■■■□□ 2.01
COL13A1-214ENST00000522165 TRPM7Q96QT4 1865 aa27.57■■■□□ 2
COL13A1-214ENST00000522165 GOLGA6L10A0A0M3HER8 536 aa27.57■■■□□ 2
COL13A1-214ENST00000522165 PTP4A2Q12974 167 aa27.57■■■□□ 2
COL13A1-214ENST00000522165 TERF2Q15554 542 aa27.57■■■□□ 2
COL13A1-214ENST00000522165 JADE1Q6IE81 842 aa27.57■■■□□ 2
COL13A1-214ENST00000522165 LLGL2Q6P1M3 1020 aa27.57■■■□□ 2
COL13A1-214ENST00000522165 SCARA5Q6ZMJ2 495 aa27.57■■■□□ 2
COL13A1-214ENST00000522165 MED4Q9NPJ6 270 aa27.57■■■□□ 2
COL13A1-214ENST00000522165 PYGMP11217 842 aa27.56■■■□□ 2
COL13A1-214ENST00000522165 C1QBPQ07021 282 aaKnown RBP27.56■■■□□ 2
COL13A1-214ENST00000522165 SEL1L2Q5TEA6 688 aa27.56■■■□□ 2
COL13A1-214ENST00000522165 ADAT2Q7Z6V5 191 aaKnown RBP27.56■■■□□ 2
COL13A1-214ENST00000522165 ERVK-5Q9HDB9 667 aa27.56■■■□□ 2
COL13A1-214ENST00000522165 A0A1B0GUA9 196 aa27.56■■■□□ 2
COL13A1-214ENST00000522165 ERLIN2O94905 339 aa27.56■■■□□ 2
COL13A1-214ENST00000522165 KRT19P08727 400 aa27.56■■■□□ 2
COL13A1-214ENST00000522165 ZNF865P0CJ78 1059 aaPredicted RBP27.56■■■□□ 2
COL13A1-214ENST00000522165 HSPA6P17066 643 aa27.56■■■□□ 2
COL13A1-214ENST00000522165 SLC10A6Q3KNW5 377 aa27.56■■■□□ 2
COL13A1-214ENST00000522165 HSP90B2PQ58FF3 399 aa27.56■■■□□ 2
COL13A1-214ENST00000522165 MMS22LQ6ZRQ5 1243 aa27.56■■■□□ 2
COL13A1-214ENST00000522165 POLIQ9UNA4 740 aa27.56■■■□□ 2
COL13A1-214ENST00000522165 MYO1FO00160 1098 aa27.55■■■□□ 2
COL13A1-214ENST00000522165 F2P00734 622 aa27.55■■■□□ 2
COL13A1-214ENST00000522165 RWDD2BP57060 319 aa27.55■■■□□ 2
COL13A1-214ENST00000522165 YWHAEP62258 255 aaKnown RBP27.55■■■□□ 2
COL13A1-214ENST00000522165 CUL1Q13616 776 aa27.55■■■□□ 2
COL13A1-214ENST00000522165 ZNF394Q53GI3 561 aa27.55■■■□□ 2
COL13A1-214ENST00000522165 PLEKHA7Q6IQ23 1121 aa27.55■■■□□ 2
COL13A1-214ENST00000522165 CXorf38Q8TB03 319 aa27.55■■■□□ 2
COL13A1-214ENST00000522165 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP27.55■■■□□ 2
COL13A1-214ENST00000522165 USP6NLQ92738 828 aa27.55■■■□□ 2
COL13A1-214ENST00000522165 KAT2BQ92831 832 aa27.55■■■□□ 2
COL13A1-214ENST00000522165 NXF1Q9UBU9 619 aaKnown RBP27.55■■■□□ 2
COL13A1-214ENST00000522165 LSM8O95777 96 aaKnown RBP27.55■■■□□ 2
COL13A1-214ENST00000522165 FAM153BP0C7A2 387 aa27.55■■■□□ 2
COL13A1-214ENST00000522165 BRD2P25440 801 aaKnown RBP27.55■■■□□ 2
COL13A1-214ENST00000522165 SLC1A1P43005 524 aa27.55■■■□□ 2
COL13A1-214ENST00000522165 MAMLD1Q13495 774 aa27.55■■■□□ 2
COL13A1-214ENST00000522165 FAM153CQ494X1 144 aa27.55■■■□□ 2
COL13A1-214ENST00000522165 OLFML2BQ68BL8 750 aa27.55■■■□□ 2
COL13A1-214ENST00000522165 CHADLQ6NUI6 762 aa27.55■■■□□ 2
COL13A1-214ENST00000522165 ILDR2Q71H61 639 aa27.55■■■□□ 2
COL13A1-214ENST00000522165 FAM71BQ8TC56 605 aa27.55■■■□□ 2
COL13A1-214ENST00000522165 BCO2Q9BYV7 579 aa27.55■■■□□ 2
COL13A1-214ENST00000522165 ADAMTS10Q9H324 1103 aa27.55■■■□□ 2
COL13A1-214ENST00000522165 FAM153AQ9UHL3 310 aa27.55■■■□□ 2
COL13A1-214ENST00000522165 TTI1O43156 1089 aa27.54■■■□□ 2
COL13A1-214ENST00000522165 SMIM10L2AP0DMW4 78 aa27.54■■■□□ 2
COL13A1-214ENST00000522165 SMIM10L2BP0DMW5 78 aa27.54■■■□□ 2
COL13A1-214ENST00000522165 ZNF667Q5HYK9 610 aa27.54■■■□□ 2
COL13A1-214ENST00000522165 C17orf99Q6UX52 265 aa27.54■■■□□ 2
COL13A1-214ENST00000522165 TLK2Q86UE8 772 aa27.54■■■□□ 2
COL13A1-214ENST00000522165 FAXDC2Q96IV6 333 aa27.54■■■□□ 2
COL13A1-214ENST00000522165 MRPL47Q9HD33 250 aaKnown RBP27.54■■■□□ 2
COL13A1-214ENST00000522165 NRCAMQ92823 1304 aa27.54■■■□□ 2
COL13A1-214ENST00000522165 MMP8P22894 467 aa27.53■■■□□ 2
COL13A1-214ENST00000522165 KIZQ2M2Z5 673 aa27.53■■■□□ 2
COL13A1-214ENST00000522165 TMEM130Q8N3G9 435 aa27.53■■■□□ 2
COL13A1-214ENST00000522165 TSEN2Q8NCE0 465 aaKnown RBP27.53■■■□□ 2
COL13A1-214ENST00000522165 WHAMMQ8TF30 809 aa27.53■■■□□ 2
COL13A1-214ENST00000522165 CELF4Q9BZC1 486 aaKnown RBP27.53■■■□□ 2
COL13A1-214ENST00000522165 SCINQ9Y6U3 715 aa27.53■■■□□ 2
COL13A1-214ENST00000522165 SYF2O95926 243 aaKnown RBP27.53■■■□□ 2
COL13A1-214ENST00000522165 ITGB3P05106 788 aa27.53■■■□□ 2
COL13A1-214ENST00000522165 ECHS1P30084 290 aa27.53■■■□□ 2
COL13A1-214ENST00000522165 CYP2C19P33261 490 aa27.53■■■□□ 2
COL13A1-214ENST00000522165 CCL14Q16627 93 aa27.53■■■□□ 2
COL13A1-214ENST00000522165 WDR72Q3MJ13 1102 aa27.53■■■□□ 2
COL13A1-214ENST00000522165 TFAP2BQ92481 460 aa27.53■■■□□ 2
COL13A1-214ENST00000522165 SEC14L1Q92503 715 aa27.53■■■□□ 2
COL13A1-214ENST00000522165 LENG1Q96BZ8 264 aaPredicted RBP27.53■■■□□ 2
COL13A1-214ENST00000522165 ADPGKQ9BRR6 497 aa27.53■■■□□ 2
COL13A1-214ENST00000522165 GOLGA6BA6NDN3 693 aa27.52■■■□□ 2
COL13A1-214ENST00000522165 AGPSO00116 658 aa27.52■■■□□ 2
COL13A1-214ENST00000522165 PROSCO94903 275 aa27.52■■■□□ 2
COL13A1-214ENST00000522165 FGFR4P22455 802 aa27.52■■■□□ 2
COL13A1-214ENST00000522165 ACAP3Q96P50 834 aa27.52■■■□□ 2
COL13A1-214ENST00000522165 FAM49AQ9H0Q0 323 aaPredicted RBP27.52■■■□□ 2
COL13A1-214ENST00000522165 PCDHGC3Q9UN70 934 aa27.52■■■□□ 2
COL13A1-214ENST00000522165 GGCXP38435 758 aa27.52■■■□□ 2
COL13A1-214ENST00000522165 TMEM132DQ14C87 1099 aa27.52■■■□□ 2
COL13A1-214ENST00000522165 SLC13A5Q86YT5 568 aaPredicted RBP27.52■■■□□ 2
COL13A1-214ENST00000522165 ZDHHC14Q8IZN3 488 aa27.52■■■□□ 2
COL13A1-214ENST00000522165 PRELID2Q8N945 189 aa27.52■■■□□ 2
COL13A1-214ENST00000522165 SLTMQ9NWH9 1034 aaKnown RBP eCLIP27.52■■■□□ 2
COL13A1-214ENST00000522165 MBLAC1A4D2B0 266 aaPredicted RBP27.51■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms