RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 CD300EQ496F6 205 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P29-201ENST00000505659 PPP4R3AQ6IN85 833 aa4.49□□□□□ -1.69
HMGB1P29-201ENST00000505659 TTC7BQ86TV6 843 aa4.49□□□□□ -1.69
HMGB1P29-201ENST00000505659 AIFM2Q9BRQ8 373 aa4.49□□□□□ -1.69
HMGB1P29-201ENST00000505659 RIOX1Q9H6W3 641 aa4.49□□□□□ -1.69
HMGB1P29-201ENST00000505659 SLAMF7Q9NQ25 335 aa4.49□□□□□ -1.69
HMGB1P29-201ENST00000505659 PCDHA3Q9Y5H8 950 aa4.49□□□□□ -1.69
HMGB1P29-201ENST00000505659 TRGV11A0A075B6L2 103 aa4.48□□□□□ -1.69
HMGB1P29-201ENST00000505659 PRSS29PA6NIE9 313 aa4.48□□□□□ -1.69
HMGB1P29-201ENST00000505659 ZAR1LA6NP61 321 aa4.48□□□□□ -1.69
HMGB1P29-201ENST00000505659 SUN1O94901 812 aa4.48□□□□□ -1.69
HMGB1P29-201ENST00000505659 IL33O95760 270 aa4.48□□□□□ -1.69
HMGB1P29-201ENST00000505659 KCNA2P16389 499 aa4.48□□□□□ -1.69
HMGB1P29-201ENST00000505659 PDCP20941 246 aa4.48□□□□□ -1.69
HMGB1P29-201ENST00000505659 GATA3P23771 443 aa4.48□□□□□ -1.69
HMGB1P29-201ENST00000505659 BLOC1S1P78537 153 aa4.48□□□□□ -1.69
HMGB1P29-201ENST00000505659 CCDC93Q567U6 631 aa4.48□□□□□ -1.69
HMGB1P29-201ENST00000505659 PRR16Q569H4 304 aa4.48□□□□□ -1.69
HMGB1P29-201ENST00000505659 TSHZ1Q6ZSZ6 1077 aa4.48□□□□□ -1.69
HMGB1P29-201ENST00000505659 ZBTB46Q86UZ6 589 aa4.48□□□□□ -1.69
HMGB1P29-201ENST00000505659 CFAP52Q8N1V2 620 aa4.48□□□□□ -1.69
HMGB1P29-201ENST00000505659 CPA6Q8N4T0 437 aa4.48□□□□□ -1.69
HMGB1P29-201ENST00000505659 STAG1Q8WVM7 1258 aa4.48□□□□□ -1.69
HMGB1P29-201ENST00000505659 LPIN2Q92539 896 aa4.48□□□□□ -1.69
HMGB1P29-201ENST00000505659 CHMP4CQ96CF2 233 aa4.48□□□□□ -1.69
HMGB1P29-201ENST00000505659 MED15Q96RN5 788 aa4.48□□□□□ -1.69
HMGB1P29-201ENST00000505659 GTPBP4Q9BZE4 634 aaKnown RBP4.48□□□□□ -1.69
HMGB1P29-201ENST00000505659 R3HDMLQ9H3Y0 253 aa4.48□□□□□ -1.69
HMGB1P29-201ENST00000505659 KCTD5Q9NXV2 234 aa4.48□□□□□ -1.69
HMGB1P29-201ENST00000505659 NOP58Q9Y2X3 529 aaKnown RBP4.48□□□□□ -1.69
HMGB1P29-201ENST00000505659 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P29-201ENST00000505659 PRAMEF33A0A0G2JMD5 474 aa4.47□□□□□ -1.69
HMGB1P29-201ENST00000505659 A0A1W2PS29 197 aa4.47□□□□□ -1.69
HMGB1P29-201ENST00000505659 MYADML2A6NDP7 307 aa4.47□□□□□ -1.69
HMGB1P29-201ENST00000505659 ZNF785A8K8V0 405 aa4.47□□□□□ -1.69
HMGB1P29-201ENST00000505659 PRAMEF10O60809 474 aa4.47□□□□□ -1.69
HMGB1P29-201ENST00000505659 NEK2P51955 445 aa4.47□□□□□ -1.69
HMGB1P29-201ENST00000505659 SIM1P81133 766 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P29-201ENST00000505659 NOGQ13253 232 aa4.47□□□□□ -1.69
HMGB1P29-201ENST00000505659 ZNF169Q14929 603 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P29-201ENST00000505659 TMEM240Q5SV17 173 aa4.47□□□□□ -1.69
HMGB1P29-201ENST00000505659 TAPT1Q6NXT6 567 aa4.47□□□□□ -1.69
HMGB1P29-201ENST00000505659 CLNKQ7Z7G1 428 aa4.47□□□□□ -1.69
HMGB1P29-201ENST00000505659 COLGALT2Q8IYK4 626 aa4.47□□□□□ -1.69
HMGB1P29-201ENST00000505659 ADGRG5Q8IZF4 528 aa4.47□□□□□ -1.69
HMGB1P29-201ENST00000505659 SIMC1Q8NDZ2 872 aa4.47□□□□□ -1.69
HMGB1P29-201ENST00000505659 SLC30A5Q8TAD4 765 aa4.47□□□□□ -1.69
HMGB1P29-201ENST00000505659 ACTRT2Q8TDY3 377 aa4.47□□□□□ -1.69
HMGB1P29-201ENST00000505659 RGMAQ96B86 450 aa4.47□□□□□ -1.69
HMGB1P29-201ENST00000505659 HOOK2Q96ED9 719 aa4.47□□□□□ -1.69
HMGB1P29-201ENST00000505659 HSPBAP1Q96EW2 488 aa4.47□□□□□ -1.69
HMGB1P29-201ENST00000505659 BBC3Q96PG8 261 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P29-201ENST00000505659 BRINP2Q9C0B6 783 aa4.47□□□□□ -1.69
HMGB1P29-201ENST00000505659 FOXJ2Q9P0K8 574 aa4.47□□□□□ -1.69
HMGB1P29-201ENST00000505659 ABCF2Q9UG63 623 aa4.47□□□□□ -1.69
HMGB1P29-201ENST00000505659 IP6K2Q9UHH9 426 aa4.47□□□□□ -1.69
HMGB1P29-201ENST00000505659 AGAP1Q9UPQ3 857 aa4.47□□□□□ -1.69
HMGB1P29-201ENST00000505659 SPEF1Q9Y4P9 236 aa4.47□□□□□ -1.69
HMGB1P29-201ENST00000505659 POLR2AP24928 1970 aaKnown RBP4.46□□□□□ -1.7
HMGB1P29-201ENST00000505659 CCDC195A0A1B0GUA6 201 aa4.46□□□□□ -1.7
HMGB1P29-201ENST00000505659 TOR1BO14657 336 aa4.46□□□□□ -1.7
HMGB1P29-201ENST00000505659 FTLP02792 175 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P29-201ENST00000505659 GJB1P08034 283 aa4.46□□□□□ -1.7
HMGB1P29-201ENST00000505659 POU2F2P09086 479 aa4.46□□□□□ -1.7
HMGB1P29-201ENST00000505659 CHRM3P20309 590 aa4.46□□□□□ -1.7
HMGB1P29-201ENST00000505659 SMARCA1P28370 1054 aa4.46□□□□□ -1.7
HMGB1P29-201ENST00000505659 PRDX5P30044 214 aa4.46□□□□□ -1.7
HMGB1P29-201ENST00000505659 MAP2K6P52564 334 aa4.46□□□□□ -1.7
HMGB1P29-201ENST00000505659 ZNF135P52742 658 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P29-201ENST00000505659 MRPS35P82673 323 aaKnown RBP4.46□□□□□ -1.7
HMGB1P29-201ENST00000505659 ZNF844Q08AG5 666 aa4.46□□□□□ -1.7
HMGB1P29-201ENST00000505659 ZNF362Q5T0B9 420 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P29-201ENST00000505659 SP5Q6BEB4 398 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P29-201ENST00000505659 SLC30A10Q6XR72 485 aa4.46□□□□□ -1.7
HMGB1P29-201ENST00000505659 USP45Q70EL2 814 aa4.46□□□□□ -1.7
HMGB1P29-201ENST00000505659 HEATR3Q7Z4Q2 680 aa4.46□□□□□ -1.7
HMGB1P29-201ENST00000505659 ADGRG3Q86Y34 549 aa4.46□□□□□ -1.7
HMGB1P29-201ENST00000505659 FAM90A1Q86YD7 464 aa4.46□□□□□ -1.7
HMGB1P29-201ENST00000505659 LNX2Q8N448 690 aa4.46□□□□□ -1.7
HMGB1P29-201ENST00000505659 PRR18Q8N4B5 295 aa4.46□□□□□ -1.7
HMGB1P29-201ENST00000505659 SH2D3CQ8N5H7 860 aa4.46□□□□□ -1.7
HMGB1P29-201ENST00000505659 C3orf20Q8ND61 904 aa4.46□□□□□ -1.7
HMGB1P29-201ENST00000505659 SMOC2Q9H3U7 446 aa4.46□□□□□ -1.7
HMGB1P29-201ENST00000505659 AASDHPPTQ9NRN7 309 aa4.46□□□□□ -1.7
HMGB1P29-201ENST00000505659 hCG_2014768A0A024R1R8 64 aa4.45□□□□□ -1.7
HMGB1P29-201ENST00000505659 PPFIA2O75334 1257 aa4.45□□□□□ -1.7
HMGB1P29-201ENST00000505659 MATN4O95460 622 aa4.45□□□□□ -1.7
HMGB1P29-201ENST00000505659 AHSGP02765 367 aa4.45□□□□□ -1.7
HMGB1P29-201ENST00000505659 RPLP2P05387 115 aaKnown RBP4.45□□□□□ -1.7
HMGB1P29-201ENST00000505659 PF4V1P10720 104 aa4.45□□□□□ -1.7
HMGB1P29-201ENST00000505659 IBSPP21815 317 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P29-201ENST00000505659 LPOP22079 712 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P29-201ENST00000505659 ANXA11P50995 505 aaKnown RBP4.45□□□□□ -1.7
HMGB1P29-201ENST00000505659 HNRNPMP52272 730 aaKnown RBP eCLIP4.45□□□□□ -1.7
HMGB1P29-201ENST00000505659 HK3P52790 923 aa4.45□□□□□ -1.7
HMGB1P29-201ENST00000505659 RPS7P62081 194 aaKnown RBP4.45□□□□□ -1.7
HMGB1P29-201ENST00000505659 EXOSC10Q01780 885 aaKnown RBP4.45□□□□□ -1.7
HMGB1P29-201ENST00000505659 FPGSQ05932 587 aa4.45□□□□□ -1.7
HMGB1P29-201ENST00000505659 DYRK1AQ13627 763 aa4.45□□□□□ -1.7
HMGB1P29-201ENST00000505659 PREPLQ4J6C6 727 aaPredicted RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms