RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 TMPRSS6Q8IU80 811 aa5.01□□□□□ -1.61
PDLIM1P4-201ENST00000504327 CREBRFQ8IUR6 639 aa5.01□□□□□ -1.61
PDLIM1P4-201ENST00000504327 OR5M3Q8NGP4 307 aa5.01□□□□□ -1.61
PDLIM1P4-201ENST00000504327 TGFBRAP1Q8WUH2 860 aa5.01□□□□□ -1.61
PDLIM1P4-201ENST00000504327 RSAD2Q8WXG1 361 aa5.01□□□□□ -1.61
PDLIM1P4-201ENST00000504327 TRIM63Q969Q1 353 aa5.01□□□□□ -1.61
PDLIM1P4-201ENST00000504327 TBATAQ96M53 351 aa5.01□□□□□ -1.61
PDLIM1P4-201ENST00000504327 TTC14Q96N46 770 aa5.01□□□□□ -1.61
PDLIM1P4-201ENST00000504327 AIFM3Q96NN9 605 aa5.01□□□□□ -1.61
PDLIM1P4-201ENST00000504327 GPR87Q9BY21 358 aa5.01□□□□□ -1.61
PDLIM1P4-201ENST00000504327 DDX21Q9NR30 783 aaKnown RBP eCLIP5.01□□□□□ -1.61
PDLIM1P4-201ENST00000504327 RRP7BPQ9NSQ0 103 aa5.01□□□□□ -1.61
PDLIM1P4-201ENST00000504327 SRRDQ9UH36 339 aa5.01□□□□□ -1.61
PDLIM1P4-201ENST00000504327 SAP30BPQ9UHR5 308 aaKnown RBP5.01□□□□□ -1.61
PDLIM1P4-201ENST00000504327 HS3ST3A1Q9Y663 406 aa5.01□□□□□ -1.61
PDLIM1P4-201ENST00000504327 DUOX2Q9NRD8 1548 aa5.01□□□□□ -1.61
PDLIM1P4-201ENST00000504327 ANKRD30AQ9BXX3 1397 aa5.01□□□□□ -1.61
PDLIM1P4-201ENST00000504327 RNF17Q9BXT8 1623 aaKnown RBP5.01□□□□□ -1.61
PDLIM1P4-201ENST00000504327 EIF2AK4Q9P2K8 1649 aaKnown RBP5.01□□□□□ -1.61
PDLIM1P4-201ENST00000504327 ZNF202O95125 648 aa5□□□□□ -1.61
PDLIM1P4-201ENST00000504327 LTA4HP09960 611 aaKnown RBP5□□□□□ -1.61
PDLIM1P4-201ENST00000504327 MYBL2P10244 700 aa5□□□□□ -1.61
PDLIM1P4-201ENST00000504327 ENPP1P22413 925 aa5□□□□□ -1.61
PDLIM1P4-201ENST00000504327 ACVRL1P37023 503 aa5□□□□□ -1.61
PDLIM1P4-201ENST00000504327 GDF5P43026 501 aa5□□□□□ -1.61
PDLIM1P4-201ENST00000504327 MAN2A2P49641 1150 aa5□□□□□ -1.61
PDLIM1P4-201ENST00000504327 DUSP2Q05923 314 aa5□□□□□ -1.61
PDLIM1P4-201ENST00000504327 FAPQ12884 760 aa5□□□□□ -1.61
PDLIM1P4-201ENST00000504327 UBE3CQ15386 1083 aa5□□□□□ -1.61
PDLIM1P4-201ENST00000504327 PDCD2Q16342 344 aaPredicted RBP5□□□□□ -1.61
PDLIM1P4-201ENST00000504327 FAM133BQ5BKY9 247 aaKnown RBP5□□□□□ -1.61
PDLIM1P4-201ENST00000504327 TMEM240Q5SV17 173 aa5□□□□□ -1.61
PDLIM1P4-201ENST00000504327 DACT2Q5SW24 774 aa5□□□□□ -1.61
PDLIM1P4-201ENST00000504327 IQSEC1Q6DN90 963 aa5□□□□□ -1.61
PDLIM1P4-201ENST00000504327 GGT6Q6P531 493 aa5□□□□□ -1.61
PDLIM1P4-201ENST00000504327 ABHD15Q6UXT9 468 aa5□□□□□ -1.61
PDLIM1P4-201ENST00000504327 EPM2AIP1Q7L775 607 aaPredicted RBP5□□□□□ -1.61
PDLIM1P4-201ENST00000504327 SRLQ86TD4 932 aa5□□□□□ -1.61
PDLIM1P4-201ENST00000504327 ZFPM1Q8IX07 1006 aa5□□□□□ -1.61
PDLIM1P4-201ENST00000504327 CPA6Q8N4T0 437 aa5□□□□□ -1.61
PDLIM1P4-201ENST00000504327 NKAPQ8N5F7 415 aaKnown RBP5□□□□□ -1.61
PDLIM1P4-201ENST00000504327 MDGA1Q8NFP4 955 aa5□□□□□ -1.61
PDLIM1P4-201ENST00000504327 FUBP3Q96I24 572 aaKnown RBP eCLIP5□□□□□ -1.61
PDLIM1P4-201ENST00000504327 ACAP3Q96P50 834 aa5□□□□□ -1.61
PDLIM1P4-201ENST00000504327 QRSL1Q9H0R6 528 aaKnown RBP5□□□□□ -1.61
PDLIM1P4-201ENST00000504327 EPC1Q9H2F5 836 aa5□□□□□ -1.61
PDLIM1P4-201ENST00000504327 AURKAIP1Q9NWT8 199 aaPredicted RBP5□□□□□ -1.61
PDLIM1P4-201ENST00000504327 DPP7Q9UHL4 492 aa5□□□□□ -1.61
PDLIM1P4-201ENST00000504327 ZBTB21Q9ULJ3 1066 aa5□□□□□ -1.61
PDLIM1P4-201ENST00000504327 ROCK1Q13464 1354 aa5□□□□□ -1.61
PDLIM1P4-201ENST00000504327 C3P01024 1663 aa4.99□□□□□ -1.61
PDLIM1P4-201ENST00000504327 CLTCQ00610 1675 aaKnown RBP4.99□□□□□ -1.61
PDLIM1P4-201ENST00000504327 SRCAPQ6ZRS2 3230 aa4.99□□□□□ -1.61
PDLIM1P4-201ENST00000504327 ERBINQ96RT1 1412 aa4.99□□□□□ -1.61
PDLIM1P4-201ENST00000504327 CNTLNQ9NXG0 1405 aa4.99□□□□□ -1.61
PDLIM1P4-201ENST00000504327 K7ESF4 209 aa4.99□□□□□ -1.61
PDLIM1P4-201ENST00000504327 MFAP3LO75121 409 aa4.99□□□□□ -1.61
PDLIM1P4-201ENST00000504327 IPO13O94829 963 aaKnown RBP4.99□□□□□ -1.61
PDLIM1P4-201ENST00000504327 SLPIP03973 132 aa4.99□□□□□ -1.61
PDLIM1P4-201ENST00000504327 GNAT2P19087 354 aa4.99□□□□□ -1.61
PDLIM1P4-201ENST00000504327 HK1P19367 917 aa4.99□□□□□ -1.61
PDLIM1P4-201ENST00000504327 LPOP22079 712 aaPredicted RBP4.99□□□□□ -1.61
PDLIM1P4-201ENST00000504327 RRM1P23921 792 aa4.99□□□□□ -1.61
PDLIM1P4-201ENST00000504327 EIF5P55010 431 aaKnown RBP4.99□□□□□ -1.61
PDLIM1P4-201ENST00000504327 WNT3AP56704 352 aa4.99□□□□□ -1.61
PDLIM1P4-201ENST00000504327 CCT2P78371 535 aaKnown RBP4.99□□□□□ -1.61
PDLIM1P4-201ENST00000504327 CDK17Q00537 523 aa4.99□□□□□ -1.61
PDLIM1P4-201ENST00000504327 KLF10Q13118 480 aa4.99□□□□□ -1.61
PDLIM1P4-201ENST00000504327 TOMM20Q15388 145 aa4.99□□□□□ -1.61
PDLIM1P4-201ENST00000504327 CCDC184Q52MB2 194 aa4.99□□□□□ -1.61
PDLIM1P4-201ENST00000504327 LVRNQ6Q4G3 990 aa4.99□□□□□ -1.61
PDLIM1P4-201ENST00000504327 RSRC2Q7L4I2 434 aaKnown RBP4.99□□□□□ -1.61
PDLIM1P4-201ENST00000504327 GET4Q7L5D6 327 aaPredicted RBP4.99□□□□□ -1.61
PDLIM1P4-201ENST00000504327 GSPT2Q8IYD1 628 aaKnown RBP4.99□□□□□ -1.61
PDLIM1P4-201ENST00000504327 SPATA5Q8NB90 893 aa4.99□□□□□ -1.61
PDLIM1P4-201ENST00000504327 PARD3BQ8TEW8 1205 aa4.99□□□□□ -1.61
PDLIM1P4-201ENST00000504327 ST8SIA2Q92186 375 aa4.99□□□□□ -1.61
PDLIM1P4-201ENST00000504327 CCT6BQ92526 530 aa4.99□□□□□ -1.61
PDLIM1P4-201ENST00000504327 NUP88Q99567 741 aaPredicted RBP4.99□□□□□ -1.61
PDLIM1P4-201ENST00000504327 ZNF703Q9H7S9 590 aaPredicted RBP4.99□□□□□ -1.61
PDLIM1P4-201ENST00000504327 C1orf112Q9NSG2 853 aa4.99□□□□□ -1.61
PDLIM1P4-201ENST00000504327 ING1Q9UK53 422 aaPredicted RBP4.99□□□□□ -1.61
PDLIM1P4-201ENST00000504327 ZMYM3Q14202 1370 aa4.99□□□□□ -1.61
PDLIM1P4-201ENST00000504327 MROH2AA6NES4 1674 aa4.99□□□□□ -1.61
PDLIM1P4-201ENST00000504327 SETD1BQ9UPS6 1966 aaKnown RBP4.98□□□□□ -1.61
PDLIM1P4-201ENST00000504327 ANKRD50Q9ULJ7 1429 aa4.98□□□□□ -1.61
PDLIM1P4-201ENST00000504327 ABCC3O15438 1527 aa4.98□□□□□ -1.61
PDLIM1P4-201ENST00000504327 PRDM15P57071 1507 aaPredicted RBP4.98□□□□□ -1.61
PDLIM1P4-201ENST00000504327 KDM5DQ9BY66 1539 aa4.98□□□□□ -1.61
PDLIM1P4-201ENST00000504327 FAM135AQ9P2D6 1515 aa4.98□□□□□ -1.61
PDLIM1P4-201ENST00000504327 DEPDC5O75140 1603 aa4.98□□□□□ -1.61
PDLIM1P4-201ENST00000504327 GOLGA8AA7E2F4 631 aa4.98□□□□□ -1.61
PDLIM1P4-201ENST00000504327 PRSS47A8MTI9 375 aa4.98□□□□□ -1.61
PDLIM1P4-201ENST00000504327 HOXA3O43365 443 aaPredicted RBP4.98□□□□□ -1.61
PDLIM1P4-201ENST00000504327 NARSO43776 548 aaKnown RBP4.98□□□□□ -1.61
PDLIM1P4-201ENST00000504327 ORC4O43929 436 aa4.98□□□□□ -1.61
PDLIM1P4-201ENST00000504327 FAM20BO75063 409 aa4.98□□□□□ -1.61
PDLIM1P4-201ENST00000504327 PRKD3O94806 890 aa4.98□□□□□ -1.61
PDLIM1P4-201ENST00000504327 HSP90AB1P08238 724 aaKnown RBP4.98□□□□□ -1.61
PDLIM1P4-201ENST00000504327 RBP3P10745 1247 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms