RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 SSTR3P32745 418 aaPredicted RBP16.98■□□□□ 0.31
HMGXB3-202ENST00000503427 BACE1P56817 501 aa16.98■□□□□ 0.31
HMGXB3-202ENST00000503427 TMEM132DQ14C87 1099 aa16.98■□□□□ 0.31
HMGXB3-202ENST00000503427 RARS2Q5T160 578 aaKnown RBP16.98■□□□□ 0.31
HMGXB3-202ENST00000503427 RBBP8NLQ8NC74 664 aaPredicted RBP16.98■□□□□ 0.31
HMGXB3-202ENST00000503427 CEP70Q8NHQ1 597 aa16.98■□□□□ 0.31
HMGXB3-202ENST00000503427 FUT8Q9BYC5 575 aa16.98■□□□□ 0.31
HMGXB3-202ENST00000503427 VPS33BQ9H267 617 aa16.98■□□□□ 0.31
HMGXB3-202ENST00000503427 TMEM8AQ9HCN3 771 aa16.98■□□□□ 0.31
HMGXB3-202ENST00000503427 E2F6O75461 281 aa16.98■□□□□ 0.31
HMGXB3-202ENST00000503427 PRLRP16471 622 aa16.98■□□□□ 0.31
HMGXB3-202ENST00000503427 ZC2HC1CQ53FD0 456 aaPredicted RBP16.98■□□□□ 0.31
HMGXB3-202ENST00000503427 FIGNQ5HY92 759 aa16.98■□□□□ 0.31
HMGXB3-202ENST00000503427 RAET1EQ8TD07 263 aa16.98■□□□□ 0.31
HMGXB3-202ENST00000503427 RAPGEF5Q92565 580 aa16.98■□□□□ 0.31
HMGXB3-202ENST00000503427 KLHL11Q9NVR0 708 aa16.98■□□□□ 0.31
HMGXB3-202ENST00000503427 RASSF10A6NK89 507 aa16.98■□□□□ 0.31
HMGXB3-202ENST00000503427 KCNN4O15554 427 aa16.98■□□□□ 0.31
HMGXB3-202ENST00000503427 NSUN2Q08J23 767 aaKnown RBP eCLIP16.98■□□□□ 0.31
HMGXB3-202ENST00000503427 NTRK3Q16288 839 aa16.98■□□□□ 0.31
HMGXB3-202ENST00000503427 ARHGEF26Q96DR7 871 aa16.98■□□□□ 0.31
HMGXB3-202ENST00000503427 GGT7Q9UJ14 662 aa16.98■□□□□ 0.31
HMGXB3-202ENST00000503427 CENPCQ03188 943 aa16.98■□□□□ 0.31
HMGXB3-202ENST00000503427 PTGISQ16647 500 aa16.98■□□□□ 0.31
HMGXB3-202ENST00000503427 ALG13Q9NP73 1137 aaKnown RBP16.98■□□□□ 0.31
HMGXB3-202ENST00000503427 GOLGA8RI6L899 631 aa16.98■□□□□ 0.31
HMGXB3-202ENST00000503427 NME3Q13232 169 aa16.98■□□□□ 0.31
HMGXB3-202ENST00000503427 HABP4Q5JVS0 413 aaKnown RBP16.98■□□□□ 0.31
HMGXB3-202ENST00000503427 ZNF677Q86XU0 584 aa16.98■□□□□ 0.31
HMGXB3-202ENST00000503427 CATSPER1Q8NEC5 780 aa16.98■□□□□ 0.31
HMGXB3-202ENST00000503427 PNKPQ96T60 521 aa16.98■□□□□ 0.31
HMGXB3-202ENST00000503427 ZBBXA8MT70 800 aa16.97■□□□□ 0.31
HMGXB3-202ENST00000503427 F5H423 210 aaPredicted RBP16.97■□□□□ 0.31
HMGXB3-202ENST00000503427 AP3B1O00203 1094 aa16.97■□□□□ 0.31
HMGXB3-202ENST00000503427 TRAPPC3O43617 180 aa16.97■□□□□ 0.31
HMGXB3-202ENST00000503427 SPAG6O75602 509 aa16.97■□□□□ 0.31
HMGXB3-202ENST00000503427 SERPINB9P50453 376 aa16.97■□□□□ 0.31
HMGXB3-202ENST00000503427 CDK17Q00537 523 aa16.97■□□□□ 0.31
HMGXB3-202ENST00000503427 DNAL1Q4LDG9 190 aa16.97■□□□□ 0.31
HMGXB3-202ENST00000503427 C3orf67Q6ZVT6 689 aa16.97■□□□□ 0.31
HMGXB3-202ENST00000503427 DDX42Q86XP3 938 aaKnown RBP eCLIP16.97■□□□□ 0.31
HMGXB3-202ENST00000503427 FAM163AQ96GL9 167 aaPredicted RBP16.97■□□□□ 0.31
HMGXB3-202ENST00000503427 TMEM120BA0PK00 339 aa16.97■□□□□ 0.31
HMGXB3-202ENST00000503427 RRN3P2A6NIE6 340 aa16.97■□□□□ 0.31
HMGXB3-202ENST00000503427 EXTL3O43909 919 aa16.97■□□□□ 0.31
HMGXB3-202ENST00000503427 PRAMEP78395 509 aa16.97■□□□□ 0.31
HMGXB3-202ENST00000503427 GRB10Q13322 594 aa16.97■□□□□ 0.31
HMGXB3-202ENST00000503427 ERO1BQ86YB8 467 aa16.97■□□□□ 0.31
HMGXB3-202ENST00000503427 SPDYE1Q8NFV5 336 aaPredicted RBP16.97■□□□□ 0.31
HMGXB3-202ENST00000503427 PARD3BQ8TEW8 1205 aa16.97■□□□□ 0.31
HMGXB3-202ENST00000503427 PGBD4Q96DM1 585 aa16.97■□□□□ 0.31
HMGXB3-202ENST00000503427 BATF3Q9NR55 127 aa16.97■□□□□ 0.31
HMGXB3-202ENST00000503427 ADARB2Q9NS39 739 aaKnown RBP16.97■□□□□ 0.31
HMGXB3-202ENST00000503427 C6orf222P0C671 652 aaPredicted RBP16.97■□□□□ 0.31
HMGXB3-202ENST00000503427 CD44P16070 742 aaKnown RBP16.97■□□□□ 0.31
HMGXB3-202ENST00000503427 OCA2Q04671 838 aa16.97■□□□□ 0.31
HMGXB3-202ENST00000503427 CUL3Q13618 768 aa16.97■□□□□ 0.31
HMGXB3-202ENST00000503427 RABGAP1LQ5R372 815 aa16.97■□□□□ 0.31
HMGXB3-202ENST00000503427 IL17RAQ96F46 866 aa16.97■□□□□ 0.31
HMGXB3-202ENST00000503427 CELF4Q9BZC1 486 aaKnown RBP16.97■□□□□ 0.31
HMGXB3-202ENST00000503427 HOXA10P31260 410 aaPredicted RBP16.97■□□□□ 0.31
HMGXB3-202ENST00000503427 PLA2G4AP47712 749 aa16.97■□□□□ 0.31
HMGXB3-202ENST00000503427 TMEM259Q4ZIN3 620 aa16.97■□□□□ 0.31
HMGXB3-202ENST00000503427 FASTKD1Q53R41 847 aaKnown RBP16.97■□□□□ 0.31
HMGXB3-202ENST00000503427 ELMOD1Q8N336 334 aa16.97■□□□□ 0.31
HMGXB3-202ENST00000503427 ZC3H7BQ9UGR2 993 aaKnown RBP16.97■□□□□ 0.31
HMGXB3-202ENST00000503427 DDTLA6NHG4 134 aaPredicted RBP16.96■□□□□ 0.31
HMGXB3-202ENST00000503427 PDGFRAP16234 1089 aa16.96■□□□□ 0.31
HMGXB3-202ENST00000503427 MAGEA4P43358 317 aa16.96■□□□□ 0.31
HMGXB3-202ENST00000503427 CXCL9Q07325 125 aa16.96■□□□□ 0.31
HMGXB3-202ENST00000503427 ATF7IP2Q5U623 682 aa16.96■□□□□ 0.31
HMGXB3-202ENST00000503427 UNC45AQ9H3U1 944 aa16.96■□□□□ 0.31
HMGXB3-202ENST00000503427 WARS2Q9UGM6 360 aaKnown RBP16.96■□□□□ 0.31
HMGXB3-202ENST00000503427 CCT8L1PA6NM43 557 aa16.96■□□□□ 0.31
HMGXB3-202ENST00000503427 CD4P01730 458 aa16.96■□□□□ 0.31
HMGXB3-202ENST00000503427 C4orf33Q8N1A6 199 aa16.96■□□□□ 0.31
HMGXB3-202ENST00000503427 TPCN2Q8NHX9 752 aa16.96■□□□□ 0.31
HMGXB3-202ENST00000503427 ZKSCAN4Q969J2 545 aaPredicted RBP16.96■□□□□ 0.31
HMGXB3-202ENST00000503427 NPHS2Q9NP85 383 aa16.96■□□□□ 0.31
HMGXB3-202ENST00000503427 WDR70Q9NW82 654 aa16.96■□□□□ 0.31
HMGXB3-202ENST00000503427 SNX5Q9Y5X3 404 aa16.96■□□□□ 0.31
HMGXB3-202ENST00000503427 SEC24CP53992 1094 aa16.96■□□□□ 0.31
HMGXB3-202ENST00000503427 ZNF200P98182 395 aaPredicted RBP16.96■□□□□ 0.31
HMGXB3-202ENST00000503427 KYNUQ16719 465 aa16.96■□□□□ 0.31
HMGXB3-202ENST00000503427 ILDR1Q86SU0 546 aaPredicted RBP16.96■□□□□ 0.31
HMGXB3-202ENST00000503427 SCAF8Q9UPN6 1271 aaKnown RBP16.96■□□□□ 0.31
HMGXB3-202ENST00000503427 APRTP07741 180 aa16.96■□□□□ 0.3
HMGXB3-202ENST00000503427 CCND1P24385 295 aa16.96■□□□□ 0.3
HMGXB3-202ENST00000503427 AARSP49588 968 aaKnown RBP eCLIP16.96■□□□□ 0.3
HMGXB3-202ENST00000503427 CORO7P57737 925 aa16.96■□□□□ 0.3
HMGXB3-202ENST00000503427 DGKDQ16760 1214 aa16.96■□□□□ 0.3
HMGXB3-202ENST00000503427 KDM7AQ6ZMT4 941 aa16.96■□□□□ 0.3
HMGXB3-202ENST00000503427 MCEEQ96PE7 176 aa16.96■□□□□ 0.3
HMGXB3-202ENST00000503427 RAB6BQ9NRW1 208 aa16.96■□□□□ 0.3
HMGXB3-202ENST00000503427 XPO7Q9UIA9 1087 aaKnown RBP16.96■□□□□ 0.3
HMGXB3-202ENST00000503427 HSD17B3P37058 310 aa16.95■□□□□ 0.3
HMGXB3-202ENST00000503427 TOB1P50616 345 aaPredicted RBP16.95■□□□□ 0.3
HMGXB3-202ENST00000503427 NPEPPSP55786 919 aa16.95■□□□□ 0.3
HMGXB3-202ENST00000503427 FKBP1AP62942 108 aaKnown RBP16.95■□□□□ 0.3
HMGXB3-202ENST00000503427 KDSRQ06136 332 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms