RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 NOLC1Q14978 699 aaKnown RBP eCLIP13.46□□□□□ -0.25
SAMM50-205ENST00000493621 SLC10A6Q3KNW5 377 aa13.46□□□□□ -0.25
SAMM50-205ENST00000493621 KRT79Q5XKE5 535 aa13.46□□□□□ -0.25
SAMM50-205ENST00000493621 PRR23BQ6ZRT6 265 aa13.46□□□□□ -0.25
SAMM50-205ENST00000493621 C1orf186Q6ZWK4 172 aa13.46□□□□□ -0.25
SAMM50-205ENST00000493621 KCNK18Q7Z418 384 aa13.46□□□□□ -0.25
SAMM50-205ENST00000493621 MFSD6LQ8IWD5 586 aa13.46□□□□□ -0.25
SAMM50-205ENST00000493621 LEMD2Q8NC56 503 aa13.46□□□□□ -0.25
SAMM50-205ENST00000493621 SHKBP1Q8TBC3 707 aa13.46□□□□□ -0.25
SAMM50-205ENST00000493621 LLPHQ9BRT6 129 aaKnown RBP13.46□□□□□ -0.25
SAMM50-205ENST00000493621 IER2Q9BTL4 223 aa13.46□□□□□ -0.25
SAMM50-205ENST00000493621 SLITRK6Q9H5Y7 841 aa13.46□□□□□ -0.25
SAMM50-205ENST00000493621 MAFFQ9ULX9 164 aa13.46□□□□□ -0.25
SAMM50-205ENST00000493621 LIMCH1Q9UPQ0 1083 aa13.46□□□□□ -0.25
SAMM50-205ENST00000493621 YIPF1Q9Y548 306 aa13.46□□□□□ -0.25
SAMM50-205ENST00000493621 NUP210Q8TEM1 1887 aaPredicted RBP13.45□□□□□ -0.26
SAMM50-205ENST00000493621 TOM1L1O75674 476 aa13.45□□□□□ -0.26
SAMM50-205ENST00000493621 OR4Q2P0C623 313 aa13.45□□□□□ -0.26
SAMM50-205ENST00000493621 CHRNB1P11230 501 aa13.45□□□□□ -0.26
SAMM50-205ENST00000493621 CXCL12P48061 93 aa13.45□□□□□ -0.26
SAMM50-205ENST00000493621 TOB1P50616 345 aaPredicted RBP13.45□□□□□ -0.26
SAMM50-205ENST00000493621 SATB1Q01826 763 aa13.45□□□□□ -0.26
SAMM50-205ENST00000493621 SPAG1Q07617 926 aa13.45□□□□□ -0.26
SAMM50-205ENST00000493621 RAD51AP2Q09MP3 1159 aa13.45□□□□□ -0.26
SAMM50-205ENST00000493621 LAIR1Q6GTX8 287 aa13.45□□□□□ -0.26
SAMM50-205ENST00000493621 MAMSTRQ6ZN01 415 aa13.45□□□□□ -0.26
SAMM50-205ENST00000493621 YAF2Q8IY57 180 aa13.45□□□□□ -0.26
SAMM50-205ENST00000493621 CELF5Q8N6W0 485 aaKnown RBP13.45□□□□□ -0.26
SAMM50-205ENST00000493621 FAM184AQ8NB25 1140 aa13.45□□□□□ -0.26
SAMM50-205ENST00000493621 CSGALNACT1Q8TDX6 532 aa13.45□□□□□ -0.26
SAMM50-205ENST00000493621 PGLYRP2Q96PD5 576 aa13.45□□□□□ -0.26
SAMM50-205ENST00000493621 RTKNQ9BST9 563 aa13.45□□□□□ -0.26
SAMM50-205ENST00000493621 C17orf75Q9HAS0 396 aa13.45□□□□□ -0.26
SAMM50-205ENST00000493621 TRPV4Q9HBA0 871 aa13.45□□□□□ -0.26
SAMM50-205ENST00000493621 PCDHB6Q9Y5E3 794 aa13.45□□□□□ -0.26
SAMM50-205ENST00000493621 TIMM13Q9Y5L4 95 aaPredicted RBP13.45□□□□□ -0.26
SAMM50-205ENST00000493621 EPG5Q9HCE0 2579 aa13.45□□□□□ -0.26
SAMM50-205ENST00000493621 TPRP12270 2363 aaKnown RBP13.45□□□□□ -0.26
SAMM50-205ENST00000493621 KMT2BQ9UMN6 2715 aaPredicted RBP13.44□□□□□ -0.26
SAMM50-205ENST00000493621 A0A1W2PRU2 124 aa13.44□□□□□ -0.26
SAMM50-205ENST00000493621 ARNTLO00327 626 aa13.44□□□□□ -0.26
SAMM50-205ENST00000493621 VNN2O95498 520 aa13.44□□□□□ -0.26
SAMM50-205ENST00000493621 CXCL8P10145 99 aa13.44□□□□□ -0.26
SAMM50-205ENST00000493621 MATR3P43243 847 aaKnown RBP eCLIP13.44□□□□□ -0.26
SAMM50-205ENST00000493621 HMGN5P82970 282 aaKnown RBP13.44□□□□□ -0.26
SAMM50-205ENST00000493621 YWHAHQ04917 246 aaPredicted RBP13.44□□□□□ -0.26
SAMM50-205ENST00000493621 GAS6Q14393 721 aa13.44□□□□□ -0.26
SAMM50-205ENST00000493621 ZRSR1Q15695 479 aaKnown RBP13.44□□□□□ -0.26
SAMM50-205ENST00000493621 IL17AQ16552 155 aa13.44□□□□□ -0.26
SAMM50-205ENST00000493621 GPIHBP1Q8IV16 184 aa13.44□□□□□ -0.26
SAMM50-205ENST00000493621 BEST2Q8NFU1 509 aa13.44□□□□□ -0.26
SAMM50-205ENST00000493621 RSPRY1Q96DX4 576 aa13.44□□□□□ -0.26
SAMM50-205ENST00000493621 KIF12Q96FN5 646 aa13.44□□□□□ -0.26
SAMM50-205ENST00000493621 NTPCRQ9BSD7 190 aaKnown RBP13.44□□□□□ -0.26
SAMM50-205ENST00000493621 MMTAG2Q9BU76 263 aaKnown RBP13.44□□□□□ -0.26
SAMM50-205ENST00000493621 TIPINQ9BVW5 301 aa13.44□□□□□ -0.26
SAMM50-205ENST00000493621 GPR88Q9GZN0 384 aa13.44□□□□□ -0.26
SAMM50-205ENST00000493621 CRISPLD1Q9H336 500 aa13.44□□□□□ -0.26
SAMM50-205ENST00000493621 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.44□□□□□ -0.26
SAMM50-205ENST00000493621 SLC38A8A6NNN8 435 aa13.43□□□□□ -0.26
SAMM50-205ENST00000493621 CHURC1-FNTBB4DL54 471 aa13.43□□□□□ -0.26
SAMM50-205ENST00000493621 M0QZQ0 153 aa13.43□□□□□ -0.26
SAMM50-205ENST00000493621 ACACBO00763 2458 aa13.43□□□□□ -0.26
SAMM50-205ENST00000493621 CLDN3O15551 220 aa13.43□□□□□ -0.26
SAMM50-205ENST00000493621 OAZ2O95190 189 aa13.43□□□□□ -0.26
SAMM50-205ENST00000493621 MAPTP10636 758 aaKnown RBP13.43□□□□□ -0.26
SAMM50-205ENST00000493621 PLS3P13797 630 aa13.43□□□□□ -0.26
SAMM50-205ENST00000493621 GUCY2CP25092 1073 aa13.43□□□□□ -0.26
SAMM50-205ENST00000493621 SOX9P48436 509 aa13.43□□□□□ -0.26
SAMM50-205ENST00000493621 FNTBP49356 437 aa13.43□□□□□ -0.26
SAMM50-205ENST00000493621 KPNA1P52294 538 aaPredicted RBP13.43□□□□□ -0.26
SAMM50-205ENST00000493621 SMTNP53814 917 aa13.43□□□□□ -0.26
SAMM50-205ENST00000493621 EPHB3P54753 998 aa13.43□□□□□ -0.26
SAMM50-205ENST00000493621 MCL1Q07820 350 aa13.43□□□□□ -0.26
SAMM50-205ENST00000493621 DMWDQ09019 674 aa13.43□□□□□ -0.26
SAMM50-205ENST00000493621 DUSP4Q13115 394 aa13.43□□□□□ -0.26
SAMM50-205ENST00000493621 PLD1Q13393 1074 aa13.43□□□□□ -0.26
SAMM50-205ENST00000493621 SIM2Q14190 667 aaPredicted RBP13.43□□□□□ -0.26
SAMM50-205ENST00000493621 LRRC32Q14392 662 aa13.43□□□□□ -0.26
SAMM50-205ENST00000493621 STXBP5Q5T5C0 1151 aa13.43□□□□□ -0.26
SAMM50-205ENST00000493621 ZPBP2Q6X784 338 aa13.43□□□□□ -0.26
SAMM50-205ENST00000493621 DTHD1Q6ZMT9 781 aa13.43□□□□□ -0.26
SAMM50-205ENST00000493621 USP37Q86T82 979 aa13.43□□□□□ -0.26
SAMM50-205ENST00000493621 TMC8Q8IU68 726 aa13.43□□□□□ -0.26
SAMM50-205ENST00000493621 TMEM161BQ8NDZ6 487 aa13.43□□□□□ -0.26
SAMM50-205ENST00000493621 SPIRE2Q8WWL2 714 aa13.43□□□□□ -0.26
SAMM50-205ENST00000493621 E2F7Q96AV8 911 aa13.43□□□□□ -0.26
SAMM50-205ENST00000493621 LRRC3Q9BY71 257 aa13.43□□□□□ -0.26
SAMM50-205ENST00000493621 HAPLN2Q9GZV7 340 aa13.43□□□□□ -0.26
SAMM50-205ENST00000493621 DNAJC25Q9H1X3 360 aa13.43□□□□□ -0.26
SAMM50-205ENST00000493621 RBM12Q9NTZ6 932 aaKnown RBP13.43□□□□□ -0.26
SAMM50-205ENST00000493621 TSC2P49815 1807 aa13.43□□□□□ -0.26
SAMM50-205ENST00000493621 TTC26A0AVF1 554 aa13.42□□□□□ -0.26
SAMM50-205ENST00000493621 LAD1O00515 517 aa13.42□□□□□ -0.26
SAMM50-205ENST00000493621 CHADO15335 359 aa13.42□□□□□ -0.26
SAMM50-205ENST00000493621 HRO43593 1189 aa13.42□□□□□ -0.26
SAMM50-205ENST00000493621 KRT37O76014 449 aa13.42□□□□□ -0.26
SAMM50-205ENST00000493621 SEC24BO95487 1268 aa13.42□□□□□ -0.26
SAMM50-205ENST00000493621 RETP07949 1114 aa13.42□□□□□ -0.26
SAMM50-205ENST00000493621 CLTAP09496 248 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms