RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 CT47A1Q5JQC4 288 aaPredicted RBP11.95□□□□□ -0.5
CPSF7-212ENST00000489728 CEP135Q66GS9 1140 aa11.95□□□□□ -0.5
CPSF7-212ENST00000489728 SLC8B1Q6J4K2 584 aa11.95□□□□□ -0.5
CPSF7-212ENST00000489728 RBM23Q86U06 439 aaKnown RBP11.95□□□□□ -0.5
CPSF7-212ENST00000489728 CEP57Q86XR8 500 aa11.95□□□□□ -0.5
CPSF7-212ENST00000489728 FAM186BQ8IYM0 893 aa11.95□□□□□ -0.5
CPSF7-212ENST00000489728 RDH13Q8NBN7 331 aa11.95□□□□□ -0.5
CPSF7-212ENST00000489728 AUTS2Q8WXX7 1259 aa11.95□□□□□ -0.5
CPSF7-212ENST00000489728 MSLNLQ96KJ4 702 aa11.95□□□□□ -0.5
CPSF7-212ENST00000489728 CEP63Q96MT8 703 aa11.95□□□□□ -0.5
CPSF7-212ENST00000489728 PLEKHA4Q9H4M7 779 aa11.95□□□□□ -0.5
CPSF7-212ENST00000489728 GDAP2Q9NXN4 497 aa11.95□□□□□ -0.5
CPSF7-212ENST00000489728 MAFFQ9ULX9 164 aa11.95□□□□□ -0.5
CPSF7-212ENST00000489728 FAM50BQ9Y247 325 aa11.95□□□□□ -0.5
CPSF7-212ENST00000489728 HCFC2Q9Y5Z7 792 aa11.95□□□□□ -0.5
CPSF7-212ENST00000489728 TSC2P49815 1807 aa11.95□□□□□ -0.5
CPSF7-212ENST00000489728 PTPRJQ12913 1337 aa11.94□□□□□ -0.5
CPSF7-212ENST00000489728 KPNA7A9QM74 516 aa11.94□□□□□ -0.5
CPSF7-212ENST00000489728 PPP1R3GB7ZBB8 358 aa11.94□□□□□ -0.5
CPSF7-212ENST00000489728 C2CD2LO14523 706 aa11.94□□□□□ -0.5
CPSF7-212ENST00000489728 PER2O15055 1255 aa11.94□□□□□ -0.5
CPSF7-212ENST00000489728 TBC1D4O60343 1298 aa11.94□□□□□ -0.5
CPSF7-212ENST00000489728 STX10O60499 249 aa11.94□□□□□ -0.5
CPSF7-212ENST00000489728 TBX10O75333 385 aa11.94□□□□□ -0.5
CPSF7-212ENST00000489728 AKAP3O75969 853 aa11.94□□□□□ -0.5
CPSF7-212ENST00000489728 PAPLNO95428 1278 aa11.94□□□□□ -0.5
CPSF7-212ENST00000489728 GLUD1P00367 558 aa11.94□□□□□ -0.5
CPSF7-212ENST00000489728 EPB41P11171 864 aaKnown RBP11.94□□□□□ -0.5
CPSF7-212ENST00000489728 POLR2BP30876 1174 aaKnown RBP11.94□□□□□ -0.5
CPSF7-212ENST00000489728 ATICP31939 592 aa11.94□□□□□ -0.5
CPSF7-212ENST00000489728 GTF2H1P32780 548 aa11.94□□□□□ -0.5
CPSF7-212ENST00000489728 LTBRP36941 435 aa11.94□□□□□ -0.5
CPSF7-212ENST00000489728 CASP4P49662 377 aa11.94□□□□□ -0.5
CPSF7-212ENST00000489728 VAMP7P51809 220 aa11.94□□□□□ -0.5
CPSF7-212ENST00000489728 YWHAHQ04917 246 aaPredicted RBP11.94□□□□□ -0.5
CPSF7-212ENST00000489728 BFSP1Q12934 665 aa11.94□□□□□ -0.5
CPSF7-212ENST00000489728 PAK1Q13153 545 aa11.94□□□□□ -0.5
CPSF7-212ENST00000489728 RAB33AQ14088 237 aa11.94□□□□□ -0.5
CPSF7-212ENST00000489728 VARS2Q5ST30 1063 aaKnown RBP11.94□□□□□ -0.5
CPSF7-212ENST00000489728 ANKRD40Q6AI12 368 aa11.94□□□□□ -0.5
CPSF7-212ENST00000489728 ZNF280DQ6N043 979 aa11.94□□□□□ -0.5
CPSF7-212ENST00000489728 TTI2Q6NXR4 508 aa11.94□□□□□ -0.5
CPSF7-212ENST00000489728 CYP26C1Q6V0L0 522 aa11.94□□□□□ -0.5
CPSF7-212ENST00000489728 DSTYKQ6XUX3 929 aa11.94□□□□□ -0.5
CPSF7-212ENST00000489728 RBM43Q6ZSC3 357 aaKnown RBP11.94□□□□□ -0.5
CPSF7-212ENST00000489728 TRAPPC11Q7Z392 1133 aa11.94□□□□□ -0.5
CPSF7-212ENST00000489728 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.94□□□□□ -0.5
CPSF7-212ENST00000489728 CSGALNACT2Q8N6G5 542 aa11.94□□□□□ -0.5
CPSF7-212ENST00000489728 SMRP1Q8NCR6 262 aa11.94□□□□□ -0.5
CPSF7-212ENST00000489728 OR5B17Q8NGF7 314 aa11.94□□□□□ -0.5
CPSF7-212ENST00000489728 GPT2Q8TD30 523 aa11.94□□□□□ -0.5
CPSF7-212ENST00000489728 CCDC127Q96BQ5 260 aa11.94□□□□□ -0.5
CPSF7-212ENST00000489728 B3GALT6Q96L58 329 aa11.94□□□□□ -0.5
CPSF7-212ENST00000489728 SENP8Q96LD8 212 aa11.94□□□□□ -0.5
CPSF7-212ENST00000489728 RHOBTB2Q9BYZ6 727 aa11.94□□□□□ -0.5
CPSF7-212ENST00000489728 GZF1Q9H116 711 aaPredicted RBP11.94□□□□□ -0.5
CPSF7-212ENST00000489728 IGFLR1Q9H665 355 aa11.94□□□□□ -0.5
CPSF7-212ENST00000489728 DACH1Q9UI36 760 aa11.94□□□□□ -0.5
CPSF7-212ENST00000489728 SIX4Q9UIU6 781 aa11.94□□□□□ -0.5
CPSF7-212ENST00000489728 AGAP1Q9UPQ3 857 aa11.94□□□□□ -0.5
CPSF7-212ENST00000489728 SCN1AP35498 2009 aa11.93□□□□□ -0.5
CPSF7-212ENST00000489728 XIRP2A4UGR9 3374 aa11.93□□□□□ -0.5
CPSF7-212ENST00000489728 OR6C75A6NL08 312 aa11.93□□□□□ -0.5
CPSF7-212ENST00000489728 LRRIQ3A6PVS8 624 aaPredicted RBP11.93□□□□□ -0.5
CPSF7-212ENST00000489728 I3L4J1 428 aa11.93□□□□□ -0.5
CPSF7-212ENST00000489728 BIN1O00499 593 aa11.93□□□□□ -0.5
CPSF7-212ENST00000489728 PPEF2O14830 753 aa11.93□□□□□ -0.5
CPSF7-212ENST00000489728 SPTLC1O15269 473 aa11.93□□□□□ -0.5
CPSF7-212ENST00000489728 LINC01565O15544 149 aa11.93□□□□□ -0.5
CPSF7-212ENST00000489728 FGFR1OPO95684 399 aaKnown RBP11.93□□□□□ -0.5
CPSF7-212ENST00000489728 FAM163BP0C2L3 166 aa11.93□□□□□ -0.5
CPSF7-212ENST00000489728 CD44P16070 742 aaKnown RBP11.93□□□□□ -0.5
CPSF7-212ENST00000489728 KCNA5P22460 613 aa11.93□□□□□ -0.5
CPSF7-212ENST00000489728 GTF2F1P35269 517 aaKnown RBP eCLIP11.93□□□□□ -0.51e-13■■■■■ 40.6
CPSF7-212ENST00000489728 ITIH3Q06033 890 aa11.93□□□□□ -0.5
CPSF7-212ENST00000489728 SMAD4Q13485 552 aaKnown RBP11.93□□□□□ -0.5
CPSF7-212ENST00000489728 ZACNQ401N2 412 aa11.93□□□□□ -0.5
CPSF7-212ENST00000489728 TPGS2Q68CL5 300 aa11.93□□□□□ -0.5
CPSF7-212ENST00000489728 ANKRD54Q6NXT1 300 aa11.93□□□□□ -0.5
CPSF7-212ENST00000489728 LILRA6Q6PI73 481 aa11.93□□□□□ -0.5
CPSF7-212ENST00000489728 PRSS55Q6UWB4 352 aaPredicted RBP11.93□□□□□ -0.5
CPSF7-212ENST00000489728 DPH6Q7L8W6 267 aa11.93□□□□□ -0.5
CPSF7-212ENST00000489728 METTL23Q86XA0 190 aa11.93□□□□□ -0.5
CPSF7-212ENST00000489728 TMEM86AQ8N2M4 240 aa11.93□□□□□ -0.5
CPSF7-212ENST00000489728 TOP6BLQ8N6T0 577 aa11.93□□□□□ -0.5
CPSF7-212ENST00000489728 CMASQ8NFW8 434 aaPredicted RBP11.93□□□□□ -0.5
CPSF7-212ENST00000489728 VN1R2Q8NFZ6 395 aa11.93□□□□□ -0.5
CPSF7-212ENST00000489728 NELFBQ8WX92 580 aa11.93□□□□□ -0.5
CPSF7-212ENST00000489728 TAF4BQ92750 862 aa11.93□□□□□ -0.5
CPSF7-212ENST00000489728 SYAP1Q96A49 352 aaPredicted RBP11.93□□□□□ -0.5
CPSF7-212ENST00000489728 BORCS6Q96GS4 357 aa11.93□□□□□ -0.5
CPSF7-212ENST00000489728 ASB2Q96Q27 587 aa11.93□□□□□ -0.5
CPSF7-212ENST00000489728 CLSTN3Q9BQT9 956 aa11.93□□□□□ -0.5
CPSF7-212ENST00000489728 VRTNQ9H8Y1 702 aa11.93□□□□□ -0.5
CPSF7-212ENST00000489728 SFXN1Q9H9B4 322 aa11.93□□□□□ -0.5
CPSF7-212ENST00000489728 METTL14Q9HCE5 456 aaKnown RBP11.93□□□□□ -0.5
CPSF7-212ENST00000489728 CLEC1BQ9P126 229 aa11.93□□□□□ -0.5
CPSF7-212ENST00000489728 RWDD2AQ9UIY3 292 aa11.93□□□□□ -0.5
CPSF7-212ENST00000489728 CD207Q9UJ71 328 aa11.93□□□□□ -0.5
CPSF7-212ENST00000489728 BRWD1Q9NSI6 2320 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms