RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 KLRC4O43908 158 aa25.99■■□□□ 1.75
CPNE1-223ENST00000475146 LILRA4P59901 499 aa25.99■■□□□ 1.75
CPNE1-223ENST00000475146 KMT5BQ4FZB7 885 aa25.99■■□□□ 1.75
CPNE1-223ENST00000475146 HS2ST1Q7LGA3 356 aa25.99■■□□□ 1.75
CPNE1-223ENST00000475146 OTOP3Q7RTS5 596 aa25.99■■□□□ 1.75
CPNE1-223ENST00000475146 WDR6Q9NNW5 1121 aaKnown RBP25.99■■□□□ 1.75
CPNE1-223ENST00000475146 AGPAT3Q9NRZ7 376 aa25.99■■□□□ 1.75
CPNE1-223ENST00000475146 HSPBP1Q9NZL4 362 aa25.99■■□□□ 1.75
CPNE1-223ENST00000475146 USTQ9Y2C2 406 aa25.99■■□□□ 1.75
CPNE1-223ENST00000475146 TBC1D4O60343 1298 aa25.98■■□□□ 1.75
CPNE1-223ENST00000475146 MYL1P05976 194 aa25.98■■□□□ 1.75
CPNE1-223ENST00000475146 HNRNPA1P09651 372 aaKnown RBP eCLIP25.98■■□□□ 1.75
CPNE1-223ENST00000475146 TMEM31Q5JXX7 168 aa25.98■■□□□ 1.75
CPNE1-223ENST00000475146 ACSF2Q96CM8 615 aaPredicted RBP25.98■■□□□ 1.75
CPNE1-223ENST00000475146 PDE11AQ9HCR9 933 aa25.98■■□□□ 1.75
CPNE1-223ENST00000475146 POLIQ9UNA4 740 aa25.98■■□□□ 1.75
CPNE1-223ENST00000475146 WDR27A2RRH5 827 aa25.97■■□□□ 1.75
CPNE1-223ENST00000475146 GOLGA6L4A6NEF3 574 aa25.97■■□□□ 1.75
CPNE1-223ENST00000475146 ZNF233A6NK53 670 aa25.97■■□□□ 1.75
CPNE1-223ENST00000475146 SPTLC1O15269 473 aa25.97■■□□□ 1.75
CPNE1-223ENST00000475146 CCL16O15467 120 aa25.97■■□□□ 1.75
CPNE1-223ENST00000475146 TGFB1I1O43294 461 aa25.97■■□□□ 1.75
CPNE1-223ENST00000475146 PAPLNO95428 1278 aa25.97■■□□□ 1.75
CPNE1-223ENST00000475146 ODC1P11926 461 aa25.97■■□□□ 1.75
CPNE1-223ENST00000475146 PAX3P23760 479 aa25.97■■□□□ 1.75
CPNE1-223ENST00000475146 ELF1P32519 619 aa25.97■■□□□ 1.75
CPNE1-223ENST00000475146 BMT2Q1RMZ1 405 aa25.97■■□□□ 1.75
CPNE1-223ENST00000475146 CBWD2Q8IUF1 395 aa25.97■■□□□ 1.75
CPNE1-223ENST00000475146 PLCD3Q8N3E9 789 aa25.97■■□□□ 1.75
CPNE1-223ENST00000475146 ZNF461Q8TAF7 563 aa25.97■■□□□ 1.75
CPNE1-223ENST00000475146 CACTINQ8WUQ7 758 aaKnown RBP25.97■■□□□ 1.75
CPNE1-223ENST00000475146 SENP8Q96LD8 212 aa25.97■■□□□ 1.75
CPNE1-223ENST00000475146 ARHGEF37A1IGU5 675 aa25.96■■□□□ 1.75
CPNE1-223ENST00000475146 PRRG1O14668 218 aa25.96■■□□□ 1.75
CPNE1-223ENST00000475146 CLIC2O15247 247 aa25.96■■□□□ 1.75
CPNE1-223ENST00000475146 XYLBO75191 536 aa25.96■■□□□ 1.75
CPNE1-223ENST00000475146 PRR29P0C7W0 189 aa25.96■■□□□ 1.75
CPNE1-223ENST00000475146 CPB1P15086 417 aa25.96■■□□□ 1.75
CPNE1-223ENST00000475146 HOXA9P31269 272 aa25.96■■□□□ 1.75
CPNE1-223ENST00000475146 TAF6P49848 677 aa25.96■■□□□ 1.75
CPNE1-223ENST00000475146 CYP2J2P51589 502 aa25.96■■□□□ 1.75
CPNE1-223ENST00000475146 KRBA2Q6ZNG9 492 aa25.96■■□□□ 1.75
CPNE1-223ENST00000475146 ZDHHC14Q8IZN3 488 aa25.96■■□□□ 1.75
CPNE1-223ENST00000475146 CCDC47Q96A33 483 aaKnown RBP25.96■■□□□ 1.75
CPNE1-223ENST00000475146 ZNF560Q96MR9 790 aa25.96■■□□□ 1.75
CPNE1-223ENST00000475146 KIAA1586Q9HCI6 787 aa25.96■■□□□ 1.75
CPNE1-223ENST00000475146 C11orf16Q9NQ32 467 aa25.96■■□□□ 1.75
CPNE1-223ENST00000475146 ZNF202O95125 648 aa25.95■■□□□ 1.74
CPNE1-223ENST00000475146 OAZ2O95190 189 aa25.95■■□□□ 1.74
CPNE1-223ENST00000475146 RPN1P04843 607 aaKnown RBP25.95■■□□□ 1.74
CPNE1-223ENST00000475146 TMEM191BP0C7N4 346 aa25.95■■□□□ 1.74
CPNE1-223ENST00000475146 TYMPP19971 482 aa25.95■■□□□ 1.74
CPNE1-223ENST00000475146 GBP2P32456 591 aaPredicted RBP25.95■■□□□ 1.74
CPNE1-223ENST00000475146 SNRPFP62306 86 aaKnown RBP25.95■■□□□ 1.74
CPNE1-223ENST00000475146 STK4Q13043 487 aa25.95■■□□□ 1.74
CPNE1-223ENST00000475146 PSMD2Q13200 908 aa25.95■■□□□ 1.74
CPNE1-223ENST00000475146 PTPN21Q16825 1174 aa25.95■■□□□ 1.74
CPNE1-223ENST00000475146 KNOP1Q1ED39 458 aaKnown RBP25.95■■□□□ 1.74
CPNE1-223ENST00000475146 UVSSAQ2YD98 709 aa25.95■■□□□ 1.74
CPNE1-223ENST00000475146 OVOS1Q6IE37 1185 aa25.95■■□□□ 1.74
CPNE1-223ENST00000475146 GRASPQ7Z6J2 395 aaPredicted RBP25.95■■□□□ 1.74
CPNE1-223ENST00000475146 KIAA0895Q8NCT3 520 aa25.95■■□□□ 1.74
CPNE1-223ENST00000475146 FAM84AQ96KN4 292 aa25.95■■□□□ 1.74
CPNE1-223ENST00000475146 CYP4F11Q9HBI6 524 aa25.95■■□□□ 1.74
CPNE1-223ENST00000475146 LIMD1Q9UGP4 676 aa25.95■■□□□ 1.74
CPNE1-223ENST00000475146 GPR37L1O60883 481 aa25.94■■□□□ 1.74
CPNE1-223ENST00000475146 ABLIM3O94929 683 aa25.94■■□□□ 1.74
CPNE1-223ENST00000475146 ITGB3P05106 788 aa25.94■■□□□ 1.74
CPNE1-223ENST00000475146 POLR2BP30876 1174 aaKnown RBP25.94■■□□□ 1.74
CPNE1-223ENST00000475146 SURF1Q15526 300 aa25.94■■□□□ 1.74
CPNE1-223ENST00000475146 SV2CQ496J9 727 aa25.94■■□□□ 1.74
CPNE1-223ENST00000475146 TPGS2Q68CL5 300 aa25.94■■□□□ 1.74
CPNE1-223ENST00000475146 LMBRD2Q68DH5 695 aaPredicted RBP25.94■■□□□ 1.74
CPNE1-223ENST00000475146 RTL10Q7L3V2 364 aa25.94■■□□□ 1.74
CPNE1-223ENST00000475146 GET4Q7L5D6 327 aaPredicted RBP25.94■■□□□ 1.74
CPNE1-223ENST00000475146 RDH13Q8NBN7 331 aa25.94■■□□□ 1.74
CPNE1-223ENST00000475146 OXCT2Q9BYC2 517 aaPredicted RBP25.94■■□□□ 1.74
CPNE1-223ENST00000475146 MTMR12Q9C0I1 747 aa25.94■■□□□ 1.74
CPNE1-223ENST00000475146 SCN1AP35498 2009 aa25.93■■□□□ 1.74
CPNE1-223ENST00000475146 OR6C75A6NL08 312 aa25.93■■□□□ 1.74
CPNE1-223ENST00000475146 CYB561D2O14569 222 aa25.93■■□□□ 1.74
CPNE1-223ENST00000475146 ATF2P15336 505 aa25.93■■□□□ 1.74
CPNE1-223ENST00000475146 PNPLA4P41247 253 aa25.93■■□□□ 1.74
CPNE1-223ENST00000475146 SNRNP35Q16560 246 aaKnown RBP25.93■■□□□ 1.74
CPNE1-223ENST00000475146 C1orf127Q8N9H9 656 aa25.93■■□□□ 1.74
CPNE1-223ENST00000475146 XXYLT1Q8NBI6 393 aa25.93■■□□□ 1.74
CPNE1-223ENST00000475146 EDAQ92838 391 aa25.93■■□□□ 1.74
CPNE1-223ENST00000475146 CCDC34Q96HJ3 373 aa25.93■■□□□ 1.74
CPNE1-223ENST00000475146 ANKRD36BP1Q96IX9 119 aa25.93■■□□□ 1.74
CPNE1-223ENST00000475146 LRFN3Q9BTN0 628 aa25.93■■□□□ 1.74
CPNE1-223ENST00000475146 CGNQ9P2M7 1197 aaKnown RBP25.93■■□□□ 1.74
CPNE1-223ENST00000475146 DSEQ9UL01 958 aa25.93■■□□□ 1.74
CPNE1-223ENST00000475146 AGAP1Q9UPQ3 857 aa25.93■■□□□ 1.74
CPNE1-223ENST00000475146 LRG1P02750 347 aa25.92■■□□□ 1.74
CPNE1-223ENST00000475146 ASGR2P07307 311 aa25.92■■□□□ 1.74
CPNE1-223ENST00000475146 KRT19P08727 400 aa25.92■■□□□ 1.74
CPNE1-223ENST00000475146 OR4Q2P0C623 313 aa25.92■■□□□ 1.74
CPNE1-223ENST00000475146 NTHL1P78549 312 aa25.92■■□□□ 1.74
CPNE1-223ENST00000475146 ZXDAP98168 799 aa25.92■■□□□ 1.74
CPNE1-223ENST00000475146 ADCY1Q08828 1119 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms