RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 CRELD2Q6UXH1 353 aaPredicted RBP9.79□□□□□ -0.84
USF1-204ENST00000472217 RNF19BQ6ZMZ0 732 aa9.79□□□□□ -0.84
USF1-204ENST00000472217 HSCBQ8IWL3 235 aa9.79□□□□□ -0.84
USF1-204ENST00000472217 NPAS3Q8IXF0 933 aa9.79□□□□□ -0.84
USF1-204ENST00000472217 GPR152Q8TDT2 470 aa9.79□□□□□ -0.84
USF1-204ENST00000472217 POMGNT1Q8WZA1 660 aa9.79□□□□□ -0.84
USF1-204ENST00000472217 ZNF396Q96N95 335 aaPredicted RBP9.79□□□□□ -0.84
USF1-204ENST00000472217 PHOX2BQ99453 314 aa9.79□□□□□ -0.84
USF1-204ENST00000472217 RPP25Q9BUL9 199 aaKnown RBP9.79□□□□□ -0.84
USF1-204ENST00000472217 FGFBP2Q9BYJ0 223 aa9.79□□□□□ -0.84
USF1-204ENST00000472217 WNT16Q9UBV4 365 aa9.79□□□□□ -0.84
USF1-204ENST00000472217 CA14Q9ULX7 337 aa9.79□□□□□ -0.84
USF1-204ENST00000472217 DERAQ9Y315 318 aa9.79□□□□□ -0.84
USF1-204ENST00000472217 INSL5Q9Y5Q6 135 aa9.79□□□□□ -0.84
USF1-204ENST00000472217 DOCK6Q96HP0 2047 aa9.78□□□□□ -0.84
USF1-204ENST00000472217 ANO9A1A5B4 782 aa9.78□□□□□ -0.84
USF1-204ENST00000472217 SPTLC1O15269 473 aa9.78□□□□□ -0.84
USF1-204ENST00000472217 PI15O43692 258 aa9.78□□□□□ -0.84
USF1-204ENST00000472217 OAZ2O95190 189 aa9.78□□□□□ -0.84
USF1-204ENST00000472217 VNN2O95498 520 aa9.78□□□□□ -0.84
USF1-204ENST00000472217 YEATS4O95619 227 aa9.78□□□□□ -0.84
USF1-204ENST00000472217 HSP90AA1P07900 732 aaKnown RBP9.78□□□□□ -0.84
USF1-204ENST00000472217 OR4Q2P0C623 313 aa9.78□□□□□ -0.84
USF1-204ENST00000472217 ZSCAN22P10073 491 aaPredicted RBP9.78□□□□□ -0.84
USF1-204ENST00000472217 ODC1P11926 461 aa9.78□□□□□ -0.84
USF1-204ENST00000472217 PTPN2P17706 415 aa9.78□□□□□ -0.84
USF1-204ENST00000472217 AOC1P19801 751 aa9.78□□□□□ -0.84
USF1-204ENST00000472217 NUBP1P53384 320 aa9.78□□□□□ -0.84
USF1-204ENST00000472217 LILRA4P59901 499 aa9.78□□□□□ -0.84
USF1-204ENST00000472217 ADCY1Q08828 1119 aa9.78□□□□□ -0.84
USF1-204ENST00000472217 E2F4Q16254 413 aa9.78□□□□□ -0.84
USF1-204ENST00000472217 C9orf57Q5W0N0 161 aa9.78□□□□□ -0.84
USF1-204ENST00000472217 POTEHQ6S545 545 aa9.78□□□□□ -0.84
USF1-204ENST00000472217 DSTYKQ6XUX3 929 aa9.78□□□□□ -0.84
USF1-204ENST00000472217 MTSS1LQ765P7 747 aa9.78□□□□□ -0.84
USF1-204ENST00000472217 USP37Q86T82 979 aa9.78□□□□□ -0.84
USF1-204ENST00000472217 EFCAB13Q8IY85 973 aa9.78□□□□□ -0.84
USF1-204ENST00000472217 SENP8Q96LD8 212 aa9.78□□□□□ -0.84
USF1-204ENST00000472217 ACCSQ96QU6 501 aa9.78□□□□□ -0.84
USF1-204ENST00000472217 KXD1Q9BQD3 176 aa9.78□□□□□ -0.84
USF1-204ENST00000472217 CORO1BQ9BR76 489 aa9.78□□□□□ -0.84
USF1-204ENST00000472217 ASB7Q9H672 318 aa9.78□□□□□ -0.84
USF1-204ENST00000472217 AVENQ9NQS1 362 aaPredicted RBP9.78□□□□□ -0.84
USF1-204ENST00000472217 PANK4Q9NVE7 773 aa9.78□□□□□ -0.84
USF1-204ENST00000472217 FAM86C1Q9NVL1 165 aa9.78□□□□□ -0.84
USF1-204ENST00000472217 AFF4Q9UHB7 1163 aaKnown RBP9.78□□□□□ -0.84
USF1-204ENST00000472217 KCNH3Q9ULD8 1083 aa9.78□□□□□ -0.84
USF1-204ENST00000472217 EXOC7Q9UPT5 735 aa9.78□□□□□ -0.84
USF1-204ENST00000472217 MRPS23Q9Y3D9 190 aaKnown RBP9.78□□□□□ -0.84
USF1-204ENST00000472217 C2CD2Q9Y426 696 aa9.78□□□□□ -0.84
USF1-204ENST00000472217 COL4A3Q01955 1670 aa9.77□□□□□ -0.84
USF1-204ENST00000472217 ZDBF2Q9HCK1 2354 aa9.77□□□□□ -0.85
USF1-204ENST00000472217 H0Y858 1186 aa9.77□□□□□ -0.85
USF1-204ENST00000472217 PIRO00625 290 aa9.77□□□□□ -0.85
USF1-204ENST00000472217 CUTAO60888 179 aa9.77□□□□□ -0.85
USF1-204ENST00000472217 F13A1P00488 732 aa9.77□□□□□ -0.85
USF1-204ENST00000472217 CEBPBP17676 345 aa9.77□□□□□ -0.85
USF1-204ENST00000472217 TYMPP19971 482 aa9.77□□□□□ -0.85
USF1-204ENST00000472217 CCR2P41597 374 aa9.77□□□□□ -0.85
USF1-204ENST00000472217 WNT7BP56706 349 aa9.77□□□□□ -0.85
USF1-204ENST00000472217 POU5F1Q01860 360 aaKnown RBP9.77□□□□□ -0.85
USF1-204ENST00000472217 TWF1Q12792 350 aa9.77□□□□□ -0.85
USF1-204ENST00000472217 ALCAMQ13740 583 aa9.77□□□□□ -0.85
USF1-204ENST00000472217 PKP1Q13835 747 aa9.77□□□□□ -0.85
USF1-204ENST00000472217 POSTNQ15063 836 aa9.77□□□□□ -0.85
USF1-204ENST00000472217 FOXD4L6Q3SYB3 417 aaPredicted RBP9.77□□□□□ -0.85
USF1-204ENST00000472217 PRSS36Q5K4E3 855 aa9.77□□□□□ -0.85
USF1-204ENST00000472217 OVOS1Q6IE37 1185 aa9.77□□□□□ -0.85
USF1-204ENST00000472217 SHC4Q6S5L8 630 aa9.77□□□□□ -0.85
USF1-204ENST00000472217 FOXD4L3Q6VB84 417 aaPredicted RBP9.77□□□□□ -0.85
USF1-204ENST00000472217 ZSWIM2Q8NEG5 633 aa9.77□□□□□ -0.85
USF1-204ENST00000472217 TCEAL4Q96EI5 215 aa9.77□□□□□ -0.85
USF1-204ENST00000472217 SAAL1Q96ER3 474 aa9.77□□□□□ -0.85
USF1-204ENST00000472217 MCRS1Q96EZ8 462 aa9.77□□□□□ -0.85
USF1-204ENST00000472217 PGLYRP2Q96PD5 576 aa9.77□□□□□ -0.85
USF1-204ENST00000472217 TMEM209Q96SK2 561 aa9.77□□□□□ -0.85
USF1-204ENST00000472217 FAM213AQ9BRX8 229 aa9.77□□□□□ -0.85
USF1-204ENST00000472217 OXCT2Q9BYC2 517 aaPredicted RBP9.77□□□□□ -0.85
USF1-204ENST00000472217 TNMDQ9H2S6 317 aa9.77□□□□□ -0.85
USF1-204ENST00000472217 CUEDC2Q9H467 287 aa9.77□□□□□ -0.85
USF1-204ENST00000472217 TBC1D17Q9HA65 648 aa9.77□□□□□ -0.85
USF1-204ENST00000472217 ARHGEF3Q9NR81 526 aa9.77□□□□□ -0.85
USF1-204ENST00000472217 SLC2A4RGQ9NR83 387 aa9.77□□□□□ -0.85
USF1-204ENST00000472217 KBTBD4Q9NVX7 518 aa9.77□□□□□ -0.85
USF1-204ENST00000472217 CEP72Q9P209 647 aa9.77□□□□□ -0.85
USF1-204ENST00000472217 MAFFQ9ULX9 164 aa9.77□□□□□ -0.85
USF1-204ENST00000472217 YIPF1Q9Y548 306 aa9.77□□□□□ -0.85
USF1-204ENST00000472217 PCDHB13Q9Y5F0 798 aa9.77□□□□□ -0.85
USF1-204ENST00000472217 OR6C75A6NL08 312 aa9.76□□□□□ -0.85
USF1-204ENST00000472217 NRG2O14511 850 aaPredicted RBP9.76□□□□□ -0.85
USF1-204ENST00000472217 PRPF6O94906 941 aaKnown RBP9.76□□□□□ -0.85
USF1-204ENST00000472217 IL18RAPO95256 599 aa9.76□□□□□ -0.85
USF1-204ENST00000472217 PDIA4P13667 645 aaKnown RBP9.76□□□□□ -0.85
USF1-204ENST00000472217 GARTP22102 1010 aa9.76□□□□□ -0.85
USF1-204ENST00000472217 PAX3P23760 479 aa9.76□□□□□ -0.85
USF1-204ENST00000472217 TAF6P49848 677 aa9.76□□□□□ -0.85
USF1-204ENST00000472217 GPC5P78333 572 aa9.76□□□□□ -0.85
USF1-204ENST00000472217 GPR17Q13304 367 aa9.76□□□□□ -0.85
USF1-204ENST00000472217 PDZD4Q76G19 769 aaPredicted RBP9.76□□□□□ -0.85
USF1-204ENST00000472217 NT5DC4Q86YG4 428 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 221.4 ms