RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 ENOX1Q8TC92 643 aaKnown RBP16.11■□□□□ 0.17
CDC42SE1-203ENST00000470278 HASPINQ8TF76 798 aa16.11■□□□□ 0.17
CDC42SE1-203ENST00000470278 ZNF516Q92618 1163 aa16.11■□□□□ 0.17
CDC42SE1-203ENST00000470278 RABGGTAQ92696 567 aa16.11■□□□□ 0.17
CDC42SE1-203ENST00000470278 POP1Q99575 1024 aaKnown RBP16.11■□□□□ 0.17
CDC42SE1-203ENST00000470278 SRRTQ9BXP5 876 aaKnown RBP16.11■□□□□ 0.17
CDC42SE1-203ENST00000470278 GPR62Q9BZJ7 368 aa16.11■□□□□ 0.17
CDC42SE1-203ENST00000470278 NAT10Q9H0A0 1025 aaKnown RBP16.11■□□□□ 0.17
CDC42SE1-203ENST00000470278 NGRNQ9NPE2 291 aaKnown RBP16.11■□□□□ 0.17
CDC42SE1-203ENST00000470278 CHST7Q9NS84 486 aa16.11■□□□□ 0.17
CDC42SE1-203ENST00000470278 SIX4Q9UIU6 781 aa16.11■□□□□ 0.17
CDC42SE1-203ENST00000470278 NUB1Q9Y5A7 615 aa16.11■□□□□ 0.17
CDC42SE1-203ENST00000470278 IRAK3Q9Y616 596 aa16.11■□□□□ 0.17
CDC42SE1-203ENST00000470278 PI4K2BG5E9Z4 385 aa16.1■□□□□ 0.17
CDC42SE1-203ENST00000470278 M0QZQ0 153 aa16.1■□□□□ 0.17
CDC42SE1-203ENST00000470278 PPEF2O14830 753 aa16.1■□□□□ 0.17
CDC42SE1-203ENST00000470278 STX10O60499 249 aa16.1■□□□□ 0.17
CDC42SE1-203ENST00000470278 STAU1O95793 577 aaKnown RBP16.1■□□□□ 0.17
CDC42SE1-203ENST00000470278 C4BPAP04003 597 aaKnown RBP16.1■□□□□ 0.17
CDC42SE1-203ENST00000470278 CTSAP10619 480 aa16.1■□□□□ 0.17
CDC42SE1-203ENST00000470278 FGFR3P22607 806 aa16.1■□□□□ 0.17
CDC42SE1-203ENST00000470278 POLR2BP30876 1174 aaKnown RBP16.1■□□□□ 0.17
CDC42SE1-203ENST00000470278 HOXD11P31277 338 aaPredicted RBP16.1■□□□□ 0.17
CDC42SE1-203ENST00000470278 LTBRP36941 435 aa16.1■□□□□ 0.17
CDC42SE1-203ENST00000470278 TAF6P49848 677 aa16.1■□□□□ 0.17
CDC42SE1-203ENST00000470278 LILRA4P59901 499 aa16.1■□□□□ 0.17
CDC42SE1-203ENST00000470278 RBP5P82980 135 aa16.1■□□□□ 0.17
CDC42SE1-203ENST00000470278 TIGD5Q53EQ6 642 aa16.1■□□□□ 0.17
CDC42SE1-203ENST00000470278 TDRD10Q5VZ19 366 aaKnown RBP16.1■□□□□ 0.17
CDC42SE1-203ENST00000470278 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.1■□□□□ 0.17
CDC42SE1-203ENST00000470278 VPS52Q8N1B4 723 aa16.1■□□□□ 0.17
CDC42SE1-203ENST00000470278 TMEM130Q8N3G9 435 aa16.1■□□□□ 0.17
CDC42SE1-203ENST00000470278 SLC35C1Q96A29 364 aa16.1■□□□□ 0.17
CDC42SE1-203ENST00000470278 FAM84AQ96KN4 292 aa16.1■□□□□ 0.17
CDC42SE1-203ENST00000470278 SUSD3Q96L08 255 aa16.1■□□□□ 0.17
CDC42SE1-203ENST00000470278 TCF25Q9BQ70 676 aa16.1■□□□□ 0.17
CDC42SE1-203ENST00000470278 BPIFA3Q9BQP9 254 aa16.1■□□□□ 0.17
CDC42SE1-203ENST00000470278 DNAJC25Q9H1X3 360 aa16.1■□□□□ 0.17
CDC42SE1-203ENST00000470278 THAP9Q9H5L6 903 aa16.1■□□□□ 0.17
CDC42SE1-203ENST00000470278 GRXCR2A6NFK2 248 aa16.09■□□□□ 0.17
CDC42SE1-203ENST00000470278 SYN3O14994 580 aa16.09■□□□□ 0.17
CDC42SE1-203ENST00000470278 GPR37L1O60883 481 aa16.09■□□□□ 0.17
CDC42SE1-203ENST00000470278 TRIM49P0CI25 452 aa16.09■□□□□ 0.17
CDC42SE1-203ENST00000470278 TRIM49CP0CI26 452 aa16.09■□□□□ 0.17
CDC42SE1-203ENST00000470278 IGFBP6P24592 240 aaPredicted RBP16.09■□□□□ 0.17
CDC42SE1-203ENST00000470278 ERVFC1P60507 584 aa16.09■□□□□ 0.17
CDC42SE1-203ENST00000470278 MYL5Q02045 173 aa16.09■□□□□ 0.17
CDC42SE1-203ENST00000470278 DSG1Q02413 1049 aa16.09■□□□□ 0.17
CDC42SE1-203ENST00000470278 PPP3CAQ08209 521 aa16.09■□□□□ 0.17
CDC42SE1-203ENST00000470278 SMC1AQ14683 1233 aaKnown RBP16.09■□□□□ 0.17
CDC42SE1-203ENST00000470278 BMS1Q14692 1282 aaKnown RBP16.09■□□□□ 0.17
CDC42SE1-203ENST00000470278 USP41Q3LFD5 358 aa16.09■□□□□ 0.17
CDC42SE1-203ENST00000470278 SV2CQ496J9 727 aa16.09■□□□□ 0.17
CDC42SE1-203ENST00000470278 CCDC40Q4G0X9 1142 aa16.09■□□□□ 0.17
CDC42SE1-203ENST00000470278 ANO6Q4KMQ2 910 aa16.09■□□□□ 0.17
CDC42SE1-203ENST00000470278 TCEAL5Q5H9L2 206 aa16.09■□□□□ 0.17
CDC42SE1-203ENST00000470278 SV2AQ7L0J3 742 aa16.09■□□□□ 0.17
CDC42SE1-203ENST00000470278 FAM114A1Q8IWE2 563 aa16.09■□□□□ 0.17
CDC42SE1-203ENST00000470278 TRIM59Q8IWR1 403 aa16.09■□□□□ 0.17
CDC42SE1-203ENST00000470278 CNOT6LQ96LI5 555 aaKnown RBP16.09■□□□□ 0.17
CDC42SE1-203ENST00000470278 VRTNQ9H8Y1 702 aa16.09■□□□□ 0.17
CDC42SE1-203ENST00000470278 TMEM8AQ9HCN3 771 aa16.09■□□□□ 0.17
CDC42SE1-203ENST00000470278 ENTPD7Q9NQZ7 604 aa16.09■□□□□ 0.17
CDC42SE1-203ENST00000470278 SSX2IPQ9Y2D8 614 aa16.09■□□□□ 0.17
CDC42SE1-203ENST00000470278 ARHGEF37A1IGU5 675 aa16.08■□□□□ 0.16
CDC42SE1-203ENST00000470278 H3BQ06 376 aaPredicted RBP16.08■□□□□ 0.16
CDC42SE1-203ENST00000470278 SPTLC1O15269 473 aa16.08■□□□□ 0.16
CDC42SE1-203ENST00000470278 PMM2O15305 246 aa16.08■□□□□ 0.16
CDC42SE1-203ENST00000470278 CAVIN2O95810 425 aa16.08■□□□□ 0.16
CDC42SE1-203ENST00000470278 URODP06132 367 aa16.08■□□□□ 0.16
CDC42SE1-203ENST00000470278 ATICP31939 592 aa16.08■□□□□ 0.16
CDC42SE1-203ENST00000470278 IRS1P35568 1242 aa16.08■□□□□ 0.16
CDC42SE1-203ENST00000470278 BRCC3P46736 316 aa16.08■□□□□ 0.16
CDC42SE1-203ENST00000470278 GLUD2P49448 558 aa16.08■□□□□ 0.16
CDC42SE1-203ENST00000470278 CREMQ03060 361 aa16.08■□□□□ 0.16
CDC42SE1-203ENST00000470278 MYO1EQ12965 1108 aa16.08■□□□□ 0.16
CDC42SE1-203ENST00000470278 PTPN14Q15678 1187 aa16.08■□□□□ 0.16
CDC42SE1-203ENST00000470278 TPD52L1Q16890 204 aaPredicted RBP16.08■□□□□ 0.16
CDC42SE1-203ENST00000470278 DCAF17Q5H9S7 520 aaPredicted RBP16.08■□□□□ 0.16
CDC42SE1-203ENST00000470278 TMEM31Q5JXX7 168 aa16.08■□□□□ 0.16
CDC42SE1-203ENST00000470278 FAM171A1Q5VUB5 890 aa16.08■□□□□ 0.16
CDC42SE1-203ENST00000470278 KIAA0319Q5VV43 1072 aa16.08■□□□□ 0.16
CDC42SE1-203ENST00000470278 KRT39Q6A163 491 aa16.08■□□□□ 0.16
CDC42SE1-203ENST00000470278 PDXDC1Q6P996 788 aa16.08■□□□□ 0.16
CDC42SE1-203ENST00000470278 IRF2BP1Q8IU81 584 aa16.08■□□□□ 0.16
CDC42SE1-203ENST00000470278 PIK3R5Q8WYR1 880 aa16.08■□□□□ 0.16
CDC42SE1-203ENST00000470278 TTPALQ9BTX7 342 aa16.08■□□□□ 0.16
CDC42SE1-203ENST00000470278 GDAP2Q9NXN4 497 aa16.08■□□□□ 0.16
CDC42SE1-203ENST00000470278 PCDHB8Q9UN66 801 aa16.08■□□□□ 0.16
CDC42SE1-203ENST00000470278 AGAP1Q9UPQ3 857 aa16.08■□□□□ 0.16
CDC42SE1-203ENST00000470278 NFE2L3Q9Y4A8 694 aa16.08■□□□□ 0.16
CDC42SE1-203ENST00000470278 KPNA7A9QM74 516 aa16.07■□□□□ 0.16
CDC42SE1-203ENST00000470278 LILRB3O75022 631 aa16.07■□□□□ 0.16
CDC42SE1-203ENST00000470278 VNN1O95497 513 aa16.07■□□□□ 0.16
CDC42SE1-203ENST00000470278 KRT19P08727 400 aa16.07■□□□□ 0.16
CDC42SE1-203ENST00000470278 GCLMP48507 274 aa16.07■□□□□ 0.16
CDC42SE1-203ENST00000470278 MXI1P50539 228 aa16.07■□□□□ 0.16
CDC42SE1-203ENST00000470278 BIRC3Q13489 604 aa16.07■□□□□ 0.16
CDC42SE1-203ENST00000470278 RTP2Q5QGT7 225 aa16.07■□□□□ 0.16
CDC42SE1-203ENST00000470278 CDKAL1Q5VV42 579 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms