RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 SAMD3Q8N6K7 520 aa2.41□□□□□ -2.02
NUCKS1-202ENST00000464938 Q8NA96 180 aa2.41□□□□□ -2.02
NUCKS1-202ENST00000464938 OR10H5Q8NGA6 315 aa2.41□□□□□ -2.02
NUCKS1-202ENST00000464938 BRIX1Q8TDN6 353 aaKnown RBP2.41□□□□□ -2.02
NUCKS1-202ENST00000464938 NUP133Q8WUM0 1156 aa2.41□□□□□ -2.02
NUCKS1-202ENST00000464938 MAML1Q92585 1016 aa2.41□□□□□ -2.02
NUCKS1-202ENST00000464938 SCAMP4Q969E2 229 aa2.41□□□□□ -2.02
NUCKS1-202ENST00000464938 FUBP1Q96AE4 644 aaKnown RBP2.41□□□□□ -2.02
NUCKS1-202ENST00000464938 NMD3Q96D46 503 aaKnown RBP2.41□□□□□ -2.02
NUCKS1-202ENST00000464938 FAM89AQ96GI7 184 aa2.41□□□□□ -2.02
NUCKS1-202ENST00000464938 SUCLG2Q96I99 432 aa2.41□□□□□ -2.02
NUCKS1-202ENST00000464938 KLHL32Q96NJ5 620 aa2.41□□□□□ -2.02
NUCKS1-202ENST00000464938 VKORC1Q9BQB6 163 aa2.41□□□□□ -2.02
NUCKS1-202ENST00000464938 KLHL11Q9NVR0 708 aa2.41□□□□□ -2.02
NUCKS1-202ENST00000464938 PIH1D1Q9NWS0 290 aaKnown RBP2.41□□□□□ -2.02
NUCKS1-202ENST00000464938 STK32BQ9NY57 414 aa2.41□□□□□ -2.02
NUCKS1-202ENST00000464938 CAMSAP3Q9P1Y5 1249 aaPredicted RBP2.41□□□□□ -2.02
NUCKS1-202ENST00000464938 CFAP97Q9P2B7 532 aa2.41□□□□□ -2.02
NUCKS1-202ENST00000464938 DKK2Q9UBU2 259 aa2.41□□□□□ -2.02
NUCKS1-202ENST00000464938 FEZ2Q9UHY8 353 aaPredicted RBP2.41□□□□□ -2.02
NUCKS1-202ENST00000464938 TPCN1Q9ULQ1 816 aa2.41□□□□□ -2.02
NUCKS1-202ENST00000464938 PHTF1Q9UMS5 762 aa2.41□□□□□ -2.02
NUCKS1-202ENST00000464938 SLC45A2Q9UMX9 530 aa2.41□□□□□ -2.02
NUCKS1-202ENST00000464938 A0A087WWL8 130 aa2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 A0A1W2PPL8 197 aa2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 CCDC78A2IDD5 438 aa2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 CFAP69A5D8W1 941 aa2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 TRIM43BA6NCK2 446 aa2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 MARCH11A6NNE9 402 aa2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 GOLGA6L6A8MZA4 724 aa2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 AHRRA9YTQ3 701 aa2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 DIRC3C9JPN6 131 aa2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 LEFTY2O00292 366 aa2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 FOXN3O00409 490 aaPredicted RBP2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 KIAA0391O15091 583 aaKnown RBP2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 TRIM24O15164 1050 aa2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 CYP27B1O15528 508 aa2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 PLIN1O60240 522 aa2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 PQBP1O60828 265 aaKnown RBP2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 AGFG2O95081 481 aa2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 CHEK2O96017 543 aa2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 KITP10721 976 aa2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 RARBP10826 455 aa2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 ACRV1P26436 265 aa2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 MAN2A2P49641 1150 aa2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 NEK3P51956 506 aa2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 CHN2P52757 468 aa2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 HMGA2P52926 109 aa2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 AK2P54819 239 aa2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 SOX8P57073 446 aa2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 RAP2BP61225 183 aa2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 NOMO3P69849 1222 aa2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 EXOSC9Q06265 439 aaKnown RBP2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 ZNF543Q08ER8 600 aa2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 PICALMQ13492 652 aa2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 HDAC1Q13547 482 aaPredicted RBP2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 TOB2Q14106 344 aaPredicted RBP2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 MORC3Q14149 939 aa2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 HABP2Q14520 560 aaPredicted RBP2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 RRP1BQ14684 758 aaKnown RBP2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 NOMO2Q5JPE7 1267 aa2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 KHDC1LQ5JSQ8 128 aa2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 SYCP2LQ5T4T6 812 aa2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 UTP14CQ5TAP6 766 aaKnown RBP2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 MED25Q71SY5 747 aa2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 SESTD1Q86VW0 696 aa2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 MICU3Q86XE3 530 aa2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 TMPRSS6Q8IU80 811 aa2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 GSPT2Q8IYD1 628 aaKnown RBP2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 SH2D3CQ8N5H7 860 aa2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 FITM2Q8N6M3 262 aa2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 RNF152Q8N8N0 203 aa2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 RNF169Q8NCN4 708 aa2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 TMIEQ8NEW7 156 aa2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 ATXN2LQ8WWM7 1075 aaKnown RBP2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 DDX17Q92841 729 aaKnown RBP2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 GJA10Q969M2 543 aa2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 TRIM43Q96BQ3 446 aaPredicted RBP2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 LRIG1Q96JA1 1093 aa2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 DCLRE1CQ96SD1 692 aaKnown RBP2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 COLEC11Q9BWP8 271 aa2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 PACSIN1Q9BY11 444 aa2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 UNKQ9C0B0 810 aaKnown RBP2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 LRRC27Q9C0I9 530 aa2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 BRD9Q9H8M2 597 aa2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 SARS2Q9NP81 518 aaKnown RBP2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 ST6GALNAC1Q9NSC7 600 aaPredicted RBP2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 ETAA1Q9NY74 926 aa2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 COL20A1Q9P218 1284 aa2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 STAP2Q9UGK3 403 aa2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 AGAP1Q9UPQ3 857 aa2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 HDAC5Q9UQL6 1122 aa2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 PCDHGB6Q9Y5F9 930 aa2.4□□□□□ -2.03
NUCKS1-202ENST00000464938 CDHR4A6H8M9 788 aa2.39□□□□□ -2.03
NUCKS1-202ENST00000464938 CAPN14A8MX76 684 aa2.39□□□□□ -2.03
NUCKS1-202ENST00000464938 BTN3A1O00481 513 aa2.39□□□□□ -2.03
NUCKS1-202ENST00000464938 ZNF185O15231 689 aa2.39□□□□□ -2.03
NUCKS1-202ENST00000464938 MGEA5O60502 916 aa2.39□□□□□ -2.03
NUCKS1-202ENST00000464938 FSHBP01225 129 aa2.39□□□□□ -2.03
NUCKS1-202ENST00000464938 ELANEP08246 267 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms