RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 LRRC27Q9C0I9 530 aa20.51■□□□□ 0.87
COL5A1-203ENST00000460264 DNMT3BQ9UBC3 853 aaKnown RBP20.51■□□□□ 0.87
COL5A1-203ENST00000460264 CDH7Q9ULB5 785 aa20.51■□□□□ 0.87
COL5A1-203ENST00000460264 TIMM13Q9Y5L4 95 aaPredicted RBP20.51■□□□□ 0.87
COL5A1-203ENST00000460264 SPTLC1O15269 473 aa20.5■□□□□ 0.87
COL5A1-203ENST00000460264 NARSO43776 548 aaKnown RBP20.5■□□□□ 0.87
COL5A1-203ENST00000460264 IL18RAPO95256 599 aa20.5■□□□□ 0.87
COL5A1-203ENST00000460264 SEC24AO95486 1093 aa20.5■□□□□ 0.87
COL5A1-203ENST00000460264 ME1P48163 572 aa20.5■□□□□ 0.87
COL5A1-203ENST00000460264 DSTYKQ6XUX3 929 aa20.5■□□□□ 0.87
COL5A1-203ENST00000460264 EFCAB13Q8IY85 973 aa20.5■□□□□ 0.87
COL5A1-203ENST00000460264 SYCP3Q8IZU3 236 aa20.5■□□□□ 0.87
COL5A1-203ENST00000460264 ITFG1Q8TB96 612 aa20.5■□□□□ 0.87
COL5A1-203ENST00000460264 FGF13Q92913 245 aa20.5■□□□□ 0.87
COL5A1-203ENST00000460264 FAM213AQ9BRX8 229 aa20.5■□□□□ 0.87
COL5A1-203ENST00000460264 CYP4F11Q9HBI6 524 aa20.5■□□□□ 0.87
COL5A1-203ENST00000460264 AFF4Q9UHB7 1163 aaKnown RBP20.5■□□□□ 0.87
COL5A1-203ENST00000460264 PCDHA7Q9UN72 937 aa20.5■□□□□ 0.87
COL5A1-203ENST00000460264 INSL5Q9Y5Q6 135 aa20.5■□□□□ 0.87
COL5A1-203ENST00000460264 PIRO00625 290 aa20.49■□□□□ 0.87
COL5A1-203ENST00000460264 PRPF6O94906 941 aaKnown RBP20.49■□□□□ 0.87
COL5A1-203ENST00000460264 LRG1P02750 347 aa20.49■□□□□ 0.87
COL5A1-203ENST00000460264 CPB1P15086 417 aa20.49■□□□□ 0.87
COL5A1-203ENST00000460264 TYMPP19971 482 aa20.49■□□□□ 0.87
COL5A1-203ENST00000460264 GARTP22102 1010 aa20.49■□□□□ 0.87
COL5A1-203ENST00000460264 AVPR2P30518 371 aa20.49■□□□□ 0.87
COL5A1-203ENST00000460264 ASIC1P78348 528 aa20.49■□□□□ 0.87
COL5A1-203ENST00000460264 DNM1Q05193 864 aaKnown RBP20.49■□□□□ 0.87
COL5A1-203ENST00000460264 CNNM4Q6P4Q7 775 aa20.49■□□□□ 0.87
COL5A1-203ENST00000460264 USP37Q86T82 979 aa20.49■□□□□ 0.87
COL5A1-203ENST00000460264 SLC44A3Q8N4M1 653 aa20.49■□□□□ 0.87
COL5A1-203ENST00000460264 GLIS3Q8NEA6 775 aa20.49■□□□□ 0.87
COL5A1-203ENST00000460264 ZSWIM2Q8NEG5 633 aa20.49■□□□□ 0.87
COL5A1-203ENST00000460264 HPS3Q969F9 1004 aa20.49■□□□□ 0.87
COL5A1-203ENST00000460264 SAAL1Q96ER3 474 aa20.49■□□□□ 0.87
COL5A1-203ENST00000460264 CBWD1Q9BRT8 395 aa20.49■□□□□ 0.87
COL5A1-203ENST00000460264 OXCT2Q9BYC2 517 aaPredicted RBP20.49■□□□□ 0.87
COL5A1-203ENST00000460264 DPP3Q9NY33 737 aa20.49■□□□□ 0.87
COL5A1-203ENST00000460264 CFAP45Q9UL16 551 aa20.49■□□□□ 0.87
COL5A1-203ENST00000460264 KCNH3Q9ULD8 1083 aa20.49■□□□□ 0.87
COL5A1-203ENST00000460264 MAFFQ9ULX9 164 aa20.49■□□□□ 0.87
COL5A1-203ENST00000460264 NUMBLQ9Y6R0 609 aa20.49■□□□□ 0.87
COL5A1-203ENST00000460264 POLR2DO15514 142 aaKnown RBP20.48■□□□□ 0.87
COL5A1-203ENST00000460264 RHOP08100 348 aa20.48■□□□□ 0.87
COL5A1-203ENST00000460264 ODC1P11926 461 aa20.48■□□□□ 0.87
COL5A1-203ENST00000460264 PAX3P23760 479 aa20.48■□□□□ 0.87
COL5A1-203ENST00000460264 WNT7BP56706 349 aa20.48■□□□□ 0.87
COL5A1-203ENST00000460264 AMPD3Q01432 767 aa20.48■□□□□ 0.87
COL5A1-203ENST00000460264 ADCY1Q08828 1119 aa20.48■□□□□ 0.87
COL5A1-203ENST00000460264 SLC5A9Q2M3M2 681 aa20.48■□□□□ 0.87
COL5A1-203ENST00000460264 RESP18Q5W5W9 173 aa20.48■□□□□ 0.87
COL5A1-203ENST00000460264 OVOS1Q6IE37 1185 aa20.48■□□□□ 0.87
COL5A1-203ENST00000460264 RNF19BQ6ZMZ0 732 aa20.48■□□□□ 0.87
COL5A1-203ENST00000460264 BRSK2Q8IWQ3 736 aa20.48■□□□□ 0.87
COL5A1-203ENST00000460264 NPAS3Q8IXF0 933 aa20.48■□□□□ 0.87
COL5A1-203ENST00000460264 PRSS33Q8NF86 280 aa20.48■□□□□ 0.87
COL5A1-203ENST00000460264 SENP8Q96LD8 212 aa20.48■□□□□ 0.87
COL5A1-203ENST00000460264 TMEM206Q9H813 350 aa20.48■□□□□ 0.87
COL5A1-203ENST00000460264 MAGEF1Q9HAY2 307 aa20.48■□□□□ 0.87
COL5A1-203ENST00000460264 OR6C75A6NL08 312 aa20.47■□□□□ 0.87
COL5A1-203ENST00000460264 OR4Q2P0C623 313 aa20.47■□□□□ 0.87
COL5A1-203ENST00000460264 SRFP11831 508 aa20.47■□□□□ 0.87
COL5A1-203ENST00000460264 STXBP4Q6ZWJ1 553 aa20.47■□□□□ 0.87
COL5A1-203ENST00000460264 NT5DC4Q86YG4 428 aa20.47■□□□□ 0.87
COL5A1-203ENST00000460264 ST13P5Q8NFI4 369 aaPredicted RBP20.47■□□□□ 0.87
COL5A1-203ENST00000460264 ING5Q8WYH8 240 aa20.47■□□□□ 0.87
COL5A1-203ENST00000460264 PRRX2Q99811 253 aa20.47■□□□□ 0.87
COL5A1-203ENST00000460264 C7orf25Q9BPX7 421 aa20.47■□□□□ 0.87
COL5A1-203ENST00000460264 MFSD1Q9H3U5 465 aa20.47■□□□□ 0.87
COL5A1-203ENST00000460264 AVENQ9NQS1 362 aaPredicted RBP20.47■□□□□ 0.87
COL5A1-203ENST00000460264 RBAKQ9NYW8 714 aaPredicted RBP20.47■□□□□ 0.87
COL5A1-203ENST00000460264 RCOR1Q9UKL0 485 aa20.47■□□□□ 0.87
COL5A1-203ENST00000460264 FBXL21Q9UKT6 434 aa20.47■□□□□ 0.87
COL5A1-203ENST00000460264 VNN2O95498 520 aa20.46■□□□□ 0.87
COL5A1-203ENST00000460264 PTPN2P17706 415 aa20.46■□□□□ 0.87
COL5A1-203ENST00000460264 HOXD13P35453 343 aa20.46■□□□□ 0.87
COL5A1-203ENST00000460264 NHLH1Q02575 133 aa20.46■□□□□ 0.87
COL5A1-203ENST00000460264 ARMCX5Q6P1M9 558 aa20.46■□□□□ 0.87
COL5A1-203ENST00000460264 PARM1Q6UWI2 310 aa20.46■□□□□ 0.87
COL5A1-203ENST00000460264 MTSS1LQ765P7 747 aa20.46■□□□□ 0.87
COL5A1-203ENST00000460264 FGF14Q92915 247 aa20.46■□□□□ 0.87
COL5A1-203ENST00000460264 CORO1BQ9BR76 489 aa20.46■□□□□ 0.87
COL5A1-203ENST00000460264 FAM13BQ9NYF5 915 aa20.46■□□□□ 0.87
COL5A1-203ENST00000460264 MRPS23Q9Y3D9 190 aaKnown RBP20.46■□□□□ 0.87
COL5A1-203ENST00000460264 PIEZO1Q92508 2521 aa20.46■□□□□ 0.87
COL5A1-203ENST00000460264 GOLGA8IPA6NC78 632 aa20.45■□□□□ 0.86
COL5A1-203ENST00000460264 GOLGA8JA6NMD2 632 aa20.45■□□□□ 0.86
COL5A1-203ENST00000460264 EIF3DO15371 548 aaKnown RBP eCLIP20.45■□□□□ 0.86
COL5A1-203ENST00000460264 EXTL3O43909 919 aa20.45■□□□□ 0.86
COL5A1-203ENST00000460264 LDHAP00338 332 aaKnown RBP20.45■□□□□ 0.86
COL5A1-203ENST00000460264 CYP11A1P05108 521 aa20.45■□□□□ 0.86
COL5A1-203ENST00000460264 CFHP08603 1231 aa20.45■□□□□ 0.86
COL5A1-203ENST00000460264 TAF6P49848 677 aa20.45■□□□□ 0.86
COL5A1-203ENST00000460264 TWF1Q12792 350 aa20.45■□□□□ 0.86
COL5A1-203ENST00000460264 GPR17Q13304 367 aa20.45■□□□□ 0.86
COL5A1-203ENST00000460264 MYBPC2Q14324 1141 aa20.45■□□□□ 0.86
COL5A1-203ENST00000460264 FAM26FQ5R3K3 315 aa20.45■□□□□ 0.86
COL5A1-203ENST00000460264 CWF19L1Q69YN2 538 aaKnown RBP20.45■□□□□ 0.86
COL5A1-203ENST00000460264 ASTLQ6HA08 431 aaPredicted RBP20.45■□□□□ 0.86
COL5A1-203ENST00000460264 EPM2AIP1Q7L775 607 aaPredicted RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms