RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 FOXD3Q9UJU5 478 aaPredicted RBP8.35□□□□□ -1.07
BRCC3-208ENST00000453705 PARP14Q460N5 1801 aa8.34□□□□□ -1.07
BRCC3-208ENST00000453705 KRT87PA6NCN2 255 aa8.34□□□□□ -1.07
BRCC3-208ENST00000453705 GALR2O43603 387 aaPredicted RBP8.34□□□□□ -1.07
BRCC3-208ENST00000453705 C6orf222P0C671 652 aaPredicted RBP8.34□□□□□ -1.07
BRCC3-208ENST00000453705 DHRS4L1P0CG22 281 aa8.34□□□□□ -1.07
BRCC3-208ENST00000453705 GUCY1A2P33402 732 aa8.34□□□□□ -1.07
BRCC3-208ENST00000453705 TFAP4Q01664 338 aa8.34□□□□□ -1.07
BRCC3-208ENST00000453705 NFE2L1Q14494 772 aa8.34□□□□□ -1.07
BRCC3-208ENST00000453705 KIAA0753Q2KHM9 967 aa8.34□□□□□ -1.07
BRCC3-208ENST00000453705 ASPRV1Q53RT3 343 aa8.34□□□□□ -1.07
BRCC3-208ENST00000453705 CAPRIN2Q6IMN6 1127 aaKnown RBP8.34□□□□□ -1.07
BRCC3-208ENST00000453705 APOBEC3HQ6NTF7 200 aaKnown RBP8.34□□□□□ -1.07
BRCC3-208ENST00000453705 ARMC9Q7Z3E5 817 aa8.34□□□□□ -1.07
BRCC3-208ENST00000453705 SLC51AQ86UW1 340 aa8.34□□□□□ -1.07
BRCC3-208ENST00000453705 TRIML2Q8N7C3 387 aa8.34□□□□□ -1.07
BRCC3-208ENST00000453705 SIMC1Q8NDZ2 872 aa8.34□□□□□ -1.07
BRCC3-208ENST00000453705 SPATA20Q8TB22 786 aa8.34□□□□□ -1.07
BRCC3-208ENST00000453705 DEPTORQ8TB45 409 aa8.34□□□□□ -1.07
BRCC3-208ENST00000453705 DDX1Q92499 740 aaKnown RBP8.34□□□□□ -1.07
BRCC3-208ENST00000453705 RHOVQ96L33 236 aa8.34□□□□□ -1.07
BRCC3-208ENST00000453705 CORO2BQ9UQ03 480 aa8.34□□□□□ -1.07
BRCC3-208ENST00000453705 APOBEC2Q9Y235 224 aaKnown RBP8.34□□□□□ -1.07
BRCC3-208ENST00000453705 TNPO3Q9Y5L0 923 aaKnown RBP8.34□□□□□ -1.07
BRCC3-208ENST00000453705 PAPPA2Q9BXP8 1791 aa8.34□□□□□ -1.07
BRCC3-208ENST00000453705 LTBP3Q9NS15 1303 aa8.34□□□□□ -1.07
BRCC3-208ENST00000453705 RGSL1A5PLK6 1076 aa8.34□□□□□ -1.07
BRCC3-208ENST00000453705 IKBKBO14920 756 aa8.34□□□□□ -1.07
BRCC3-208ENST00000453705 MCF2LO15068 1137 aa8.34□□□□□ -1.07
BRCC3-208ENST00000453705 PF4P02776 101 aa8.34□□□□□ -1.07
BRCC3-208ENST00000453705 PDHBP11177 359 aa8.34□□□□□ -1.07
BRCC3-208ENST00000453705 PYGMP11217 842 aa8.34□□□□□ -1.07
BRCC3-208ENST00000453705 C6P13671 934 aa8.34□□□□□ -1.07
BRCC3-208ENST00000453705 DPP6P42658 865 aa8.34□□□□□ -1.07
BRCC3-208ENST00000453705 MAPK10P53779 464 aa8.34□□□□□ -1.07
BRCC3-208ENST00000453705 ATP2C1P98194 919 aaPredicted RBP8.34□□□□□ -1.07
BRCC3-208ENST00000453705 TNFAIP2Q03169 654 aa8.34□□□□□ -1.07
BRCC3-208ENST00000453705 DMPKQ09013 629 aa8.34□□□□□ -1.07
BRCC3-208ENST00000453705 GTF2H3Q13889 308 aa8.34□□□□□ -1.07
BRCC3-208ENST00000453705 PLA2G4DQ86XP0 818 aa8.34□□□□□ -1.07
BRCC3-208ENST00000453705 ZNF444Q8N0Y2 327 aaPredicted RBP8.34□□□□□ -1.07
BRCC3-208ENST00000453705 KRT222Q8N1A0 295 aa8.34□□□□□ -1.07
BRCC3-208ENST00000453705 BBOF1Q8ND07 529 aa8.34□□□□□ -1.07
BRCC3-208ENST00000453705 TGFBRAP1Q8WUH2 860 aa8.34□□□□□ -1.07
BRCC3-208ENST00000453705 AIFM3Q96NN9 605 aa8.34□□□□□ -1.07
BRCC3-208ENST00000453705 SPATA9Q9BWV2 254 aa8.34□□□□□ -1.07
BRCC3-208ENST00000453705 PLVAPQ9BX97 442 aa8.34□□□□□ -1.07
BRCC3-208ENST00000453705 TMEM121BQ9BXQ6 578 aaPredicted RBP8.34□□□□□ -1.07
BRCC3-208ENST00000453705 CCDC177Q9NQR7 707 aaPredicted RBP8.34□□□□□ -1.07
BRCC3-208ENST00000453705 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.34□□□□□ -1.07
BRCC3-208ENST00000453705 AIPL1Q9NZN9 384 aa8.34□□□□□ -1.07
BRCC3-208ENST00000453705 PIM2Q9P1W9 311 aa8.34□□□□□ -1.07
BRCC3-208ENST00000453705 SRPK3Q9UPE1 567 aa8.34□□□□□ -1.07
BRCC3-208ENST00000453705 UPK3BL1B0FP48 263 aa8.33□□□□□ -1.08
BRCC3-208ENST00000453705 UPK3BL2E5RIL1 263 aa8.33□□□□□ -1.08
BRCC3-208ENST00000453705 CEP104O60308 925 aa8.33□□□□□ -1.08
BRCC3-208ENST00000453705 PLEKHA8P1O95397 391 aa8.33□□□□□ -1.08
BRCC3-208ENST00000453705 PDGFAP04085 211 aa8.33□□□□□ -1.08
BRCC3-208ENST00000453705 IMPDH2P12268 514 aa8.33□□□□□ -1.08
BRCC3-208ENST00000453705 RPS2P15880 293 aaKnown RBP8.33□□□□□ -1.08
BRCC3-208ENST00000453705 PFKFB1P16118 471 aa8.33□□□□□ -1.08
BRCC3-208ENST00000453705 HDCP19113 662 aa8.33□□□□□ -1.08
BRCC3-208ENST00000453705 TLX1P31314 330 aaPredicted RBP8.33□□□□□ -1.08
BRCC3-208ENST00000453705 ME1P48163 572 aa8.33□□□□□ -1.08
BRCC3-208ENST00000453705 AFF3P51826 1226 aaKnown RBP8.33□□□□□ -1.08
BRCC3-208ENST00000453705 IFI35P80217 286 aaPredicted RBP8.33□□□□□ -1.08
BRCC3-208ENST00000453705 TTBK2Q6IQ55 1244 aa8.33□□□□□ -1.08
BRCC3-208ENST00000453705 ELMSAN1Q6PJG2 1045 aa8.33□□□□□ -1.08
BRCC3-208ENST00000453705 SHC4Q6S5L8 630 aa8.33□□□□□ -1.08
BRCC3-208ENST00000453705 OR8H3Q8N146 312 aa8.33□□□□□ -1.08
BRCC3-208ENST00000453705 GALNT6Q8NCL4 622 aa8.33□□□□□ -1.08
BRCC3-208ENST00000453705 OR52K2Q8NGK3 314 aa8.33□□□□□ -1.08
BRCC3-208ENST00000453705 AGR3Q8TD06 166 aa8.33□□□□□ -1.08
BRCC3-208ENST00000453705 NOC3LQ8WTT2 800 aaKnown RBP8.33□□□□□ -1.08
BRCC3-208ENST00000453705 CCDC12Q8WUD4 166 aaPredicted RBP8.33□□□□□ -1.08
BRCC3-208ENST00000453705 NANOS1Q8WY41 292 aaKnown RBP8.33□□□□□ -1.08
BRCC3-208ENST00000453705 TTC1Q99614 292 aa8.33□□□□□ -1.08
BRCC3-208ENST00000453705 TMEM47Q9BQJ4 181 aa8.33□□□□□ -1.08
BRCC3-208ENST00000453705 MYL10Q9BUA6 226 aa8.33□□□□□ -1.08
BRCC3-208ENST00000453705 FAM53CQ9NYF3 392 aa8.33□□□□□ -1.08
BRCC3-208ENST00000453705 SPO11Q9Y5K1 396 aa8.33□□□□□ -1.08
BRCC3-208ENST00000453705 ZNF891A8MT65 544 aaPredicted RBP8.33□□□□□ -1.08
BRCC3-208ENST00000453705 G3V3G9 751 aa8.33□□□□□ -1.08
BRCC3-208ENST00000453705 ENDOD1O94919 500 aa8.33□□□□□ -1.08
BRCC3-208ENST00000453705 KCNA3P22001 575 aa8.33□□□□□ -1.08
BRCC3-208ENST00000453705 PLCD1P51178 756 aa8.33□□□□□ -1.08
BRCC3-208ENST00000453705 ACY1Q03154 408 aa8.33□□□□□ -1.08
BRCC3-208ENST00000453705 NOLC1Q14978 699 aaKnown RBP eCLIP8.33□□□□□ -1.08
BRCC3-208ENST00000453705 HHATQ5VTY9 493 aa8.33□□□□□ -1.08
BRCC3-208ENST00000453705 OTUD7BQ6GQQ9 843 aa8.33□□□□□ -1.08
BRCC3-208ENST00000453705 LSRQ86X29 649 aaPredicted RBP8.33□□□□□ -1.08
BRCC3-208ENST00000453705 CMTR2Q8IYT2 770 aaKnown RBP8.33□□□□□ -1.08
BRCC3-208ENST00000453705 LRRC47Q8N1G4 583 aaKnown RBP8.33□□□□□ -1.08
BRCC3-208ENST00000453705 USP13Q92995 863 aaPredicted RBP8.33□□□□□ -1.08
BRCC3-208ENST00000453705 TATDN2Q93075 761 aa8.33□□□□□ -1.08
BRCC3-208ENST00000453705 KISS1RQ969F8 398 aaPredicted RBP8.33□□□□□ -1.08
BRCC3-208ENST00000453705 COL26A1Q96A83 441 aa8.33□□□□□ -1.08
BRCC3-208ENST00000453705 CCDC74AQ96AQ1 378 aa8.33□□□□□ -1.08
BRCC3-208ENST00000453705 ZKSCAN3Q9BRR0 538 aa8.33□□□□□ -1.08
BRCC3-208ENST00000453705 ZMYND12Q9H0C1 365 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms