RNA–Protein interactions for RNA: ENST00000443896.5

PIKFYVE-206, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best)

Gene PIKFYVE, Length 3,282 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-206ENST00000443896 FAM189A1O60320 539 aa17.29■□□□□ 0.36
PIKFYVE-206ENST00000443896 GBP1P32455 592 aa17.29■□□□□ 0.36
PIKFYVE-206ENST00000443896 COILP38432 576 aaPredicted RBP17.29■□□□□ 0.36
PIKFYVE-206ENST00000443896 IREB2P48200 963 aaKnown RBP17.29■□□□□ 0.36
PIKFYVE-206ENST00000443896 EFNA5P52803 228 aa17.29■□□□□ 0.36
PIKFYVE-206ENST00000443896 NOP14P78316 857 aaKnown RBP17.29■□□□□ 0.36
PIKFYVE-206ENST00000443896 RUFY4Q6ZNE9 571 aa17.29■□□□□ 0.36
PIKFYVE-206ENST00000443896 EEPD1Q7L9B9 569 aa17.29■□□□□ 0.36
PIKFYVE-206ENST00000443896 SPDYE1Q8NFV5 336 aaPredicted RBP17.29■□□□□ 0.36
PIKFYVE-206ENST00000443896 PLVAPQ9BX97 442 aa17.29■□□□□ 0.36
PIKFYVE-206ENST00000443896 CCDC113Q9H0I3 377 aa17.29■□□□□ 0.36
PIKFYVE-206ENST00000443896 SPATS2LQ9NUQ6 558 aaKnown RBP17.29■□□□□ 0.36
PIKFYVE-206ENST00000443896 PCDHB4Q9Y5E5 795 aa17.29■□□□□ 0.36
PIKFYVE-206ENST00000443896 SBF1O95248 1867 aa17.29■□□□□ 0.36
PIKFYVE-206ENST00000443896 DNM1LO00429 736 aa17.29■□□□□ 0.36
PIKFYVE-206ENST00000443896 SOCS7O14512 581 aa17.29■□□□□ 0.36
PIKFYVE-206ENST00000443896 CLDN3O15551 220 aa17.29■□□□□ 0.36
PIKFYVE-206ENST00000443896 MSCO60682 206 aa17.29■□□□□ 0.36
PIKFYVE-206ENST00000443896 RASSF9O75901 435 aa17.29■□□□□ 0.36
PIKFYVE-206ENST00000443896 SLC1A1P43005 524 aa17.29■□□□□ 0.36
PIKFYVE-206ENST00000443896 NBPF20Q3BBV1 942 aa17.29■□□□□ 0.36
PIKFYVE-206ENST00000443896 IER5Q5VY09 327 aa17.29■□□□□ 0.36
PIKFYVE-206ENST00000443896 CDCA2Q69YH5 1023 aaPredicted RBP17.29■□□□□ 0.36
PIKFYVE-206ENST00000443896 BRSK2Q8IWQ3 736 aa17.29■□□□□ 0.36
PIKFYVE-206ENST00000443896 STAMBPL1Q96FJ0 436 aa17.29■□□□□ 0.36
PIKFYVE-206ENST00000443896 OTUD5Q96G74 571 aa17.29■□□□□ 0.36
PIKFYVE-206ENST00000443896 FGD4Q96M96 766 aa17.29■□□□□ 0.36
PIKFYVE-206ENST00000443896 TRIM7Q9C029 511 aa17.29■□□□□ 0.36
PIKFYVE-206ENST00000443896 AZI2Q9H6S1 392 aa17.29■□□□□ 0.36
PIKFYVE-206ENST00000443896 NUB1Q9Y5A7 615 aa17.29■□□□□ 0.36
PIKFYVE-206ENST00000443896 TTLL13PA6NNM8 815 aa17.29■□□□□ 0.36
PIKFYVE-206ENST00000443896 FSCN2O14926 492 aa17.29■□□□□ 0.36
PIKFYVE-206ENST00000443896 ARIH2O95376 493 aa17.29■□□□□ 0.36
PIKFYVE-206ENST00000443896 SLC25A27O95847 323 aa17.29■□□□□ 0.36
PIKFYVE-206ENST00000443896 IRX1P78414 480 aaPredicted RBP17.29■□□□□ 0.36
PIKFYVE-206ENST00000443896 TMEM270Q6UE05 265 aa17.29■□□□□ 0.36
PIKFYVE-206ENST00000443896 ABRAQ8N0Z2 381 aa17.29■□□□□ 0.36
PIKFYVE-206ENST00000443896 LRRC19Q9H756 370 aa17.29■□□□□ 0.36
PIKFYVE-206ENST00000443896 ATP8A1Q9Y2Q0 1164 aa17.29■□□□□ 0.36
PIKFYVE-206ENST00000443896 RPL21P46778 160 aaKnown RBP17.28■□□□□ 0.36
PIKFYVE-206ENST00000443896 GRM1Q13255 1194 aa17.28■□□□□ 0.36
PIKFYVE-206ENST00000443896 NCOA4Q13772 614 aa17.28■□□□□ 0.36
PIKFYVE-206ENST00000443896 SEZ6Q53EL9 994 aa17.28■□□□□ 0.36
PIKFYVE-206ENST00000443896 ERO1BQ86YB8 467 aa17.28■□□□□ 0.36
PIKFYVE-206ENST00000443896 FBXO25Q8TCJ0 367 aa17.28■□□□□ 0.36
PIKFYVE-206ENST00000443896 GPR20Q99678 358 aa17.28■□□□□ 0.36
PIKFYVE-206ENST00000443896 TACO1Q9BSH4 297 aaKnown RBP17.28■□□□□ 0.36
PIKFYVE-206ENST00000443896 MRPL4Q9BYD3 311 aaKnown RBP17.28■□□□□ 0.36
PIKFYVE-206ENST00000443896 UMODL1Q5DID0 1318 aa17.28■□□□□ 0.36
PIKFYVE-206ENST00000443896 CXCL11O14625 94 aa17.28■□□□□ 0.36
PIKFYVE-206ENST00000443896 LGR5O75473 907 aa17.28■□□□□ 0.36
PIKFYVE-206ENST00000443896 TOM1L1O75674 476 aa17.28■□□□□ 0.36
PIKFYVE-206ENST00000443896 GNA15P30679 374 aa17.28■□□□□ 0.36
PIKFYVE-206ENST00000443896 AP3M2P53677 418 aa17.28■□□□□ 0.36
PIKFYVE-206ENST00000443896 PLTPP55058 493 aa17.28■□□□□ 0.36
PIKFYVE-206ENST00000443896 NOMO3P69849 1222 aa17.28■□□□□ 0.36
PIKFYVE-206ENST00000443896 FUKQ8N0W3 1084 aa17.28■□□□□ 0.36
PIKFYVE-206ENST00000443896 PLCD4Q9BRC7 762 aa17.28■□□□□ 0.36
PIKFYVE-206ENST00000443896 PARP2Q9UGN5 583 aa17.28■□□□□ 0.36
PIKFYVE-206ENST00000443896 GAS2O43903 313 aaKnown RBP17.27■□□□□ 0.36
PIKFYVE-206ENST00000443896 CFHP08603 1231 aa17.27■□□□□ 0.36
PIKFYVE-206ENST00000443896 MKRN4PQ13434 485 aaPredicted RBP17.27■□□□□ 0.36
PIKFYVE-206ENST00000443896 C11orf91Q3C1V1 193 aa17.27■□□□□ 0.36
PIKFYVE-206ENST00000443896 WLSQ5T9L3 541 aa17.27■□□□□ 0.36
PIKFYVE-206ENST00000443896 AGBL2Q5U5Z8 902 aa17.27■□□□□ 0.36
PIKFYVE-206ENST00000443896 RBBP8NLQ8NC74 664 aaPredicted RBP17.27■□□□□ 0.36
PIKFYVE-206ENST00000443896 VCPIP1Q96JH7 1222 aa17.27■□□□□ 0.36
PIKFYVE-206ENST00000443896 MPHOSPH6Q99547 160 aaKnown RBP17.27■□□□□ 0.36
PIKFYVE-206ENST00000443896 IGKV6-21A0A0C4DH24 114 aa17.27■□□□□ 0.36
PIKFYVE-206ENST00000443896 ZBTB42B2RXF5 422 aa17.27■□□□□ 0.36
PIKFYVE-206ENST00000443896 HARSP12081 509 aaKnown RBP17.27■□□□□ 0.36
PIKFYVE-206ENST00000443896 NLRP14Q86W24 1093 aa17.27■□□□□ 0.36
PIKFYVE-206ENST00000443896 WDR49Q8IV35 697 aa17.27■□□□□ 0.36
PIKFYVE-206ENST00000443896 CCDC105Q8IYK2 499 aa17.27■□□□□ 0.36
PIKFYVE-206ENST00000443896 TCP11Q8WWU5 503 aa17.27■□□□□ 0.36
PIKFYVE-206ENST00000443896 CLMNQ96JQ2 1002 aa17.27■□□□□ 0.36
PIKFYVE-206ENST00000443896 EPB41L4BQ9H329 900 aa17.27■□□□□ 0.36
PIKFYVE-206ENST00000443896 AGTPBP1Q9UPW5 1226 aa17.27■□□□□ 0.36
PIKFYVE-206ENST00000443896 TNFSF9P41273 254 aa17.27■□□□□ 0.35
PIKFYVE-206ENST00000443896 EIF3BP55884 814 aaKnown RBP17.27■□□□□ 0.35
PIKFYVE-206ENST00000443896 LAMTOR4Q0VGL1 99 aa17.27■□□□□ 0.35
PIKFYVE-206ENST00000443896 MXD4Q14582 209 aaPredicted RBP17.27■□□□□ 0.35
PIKFYVE-206ENST00000443896 HSDL1Q3SXM5 330 aa17.27■□□□□ 0.35
PIKFYVE-206ENST00000443896 CELF3Q5SZQ8 465 aaKnown RBP17.27■□□□□ 0.35
PIKFYVE-206ENST00000443896 LLGL2Q6P1M3 1020 aa17.27■□□□□ 0.35
PIKFYVE-206ENST00000443896 MICALCLQ6ZW33 695 aa17.27■□□□□ 0.35
PIKFYVE-206ENST00000443896 PHF13Q86YI8 300 aaPredicted RBP17.27■□□□□ 0.35
PIKFYVE-206ENST00000443896 UBR7Q8N806 425 aa17.27■□□□□ 0.35
PIKFYVE-206ENST00000443896 NSMCE1Q8WV22 266 aa17.27■□□□□ 0.35
PIKFYVE-206ENST00000443896 SLCO2A1Q92959 643 aa17.27■□□□□ 0.35
PIKFYVE-206ENST00000443896 ACO2Q99798 780 aaKnown RBP17.27■□□□□ 0.35
PIKFYVE-206ENST00000443896 TXNRD2Q9NNW7 524 aa17.27■□□□□ 0.35
PIKFYVE-206ENST00000443896 SPDYE5A6NIY4 337 aa17.26■□□□□ 0.35
PIKFYVE-206ENST00000443896 PGK2P07205 417 aa17.26■□□□□ 0.35
PIKFYVE-206ENST00000443896 ZNF132P52740 706 aa17.26■□□□□ 0.35
PIKFYVE-206ENST00000443896 C2CD6Q53TS8 623 aa17.26■□□□□ 0.35
PIKFYVE-206ENST00000443896 LIN9Q5TKA1 542 aa17.26■□□□□ 0.35
PIKFYVE-206ENST00000443896 PLPPR4Q7Z2D5 763 aa17.26■□□□□ 0.35
PIKFYVE-206ENST00000443896 PNMA8AQ86V59 439 aaPredicted RBP17.26■□□□□ 0.35
PIKFYVE-206ENST00000443896 FAM167BQ9BTA0 163 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms