RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 CARD11Q9BXL7 1154 aa5.14□□□□□ -1.59
HMGB3P9-201ENST00000441799 RTFDC1Q9BY42 306 aaPredicted RBP5.14□□□□□ -1.59
HMGB3P9-201ENST00000441799 TRPV6Q9H1D0 765 aa5.14□□□□□ -1.59
HMGB3P9-201ENST00000441799 BHMT2Q9H2M3 363 aa5.14□□□□□ -1.59
HMGB3P9-201ENST00000441799 GRPEL1Q9HAV7 217 aa5.14□□□□□ -1.59
HMGB3P9-201ENST00000441799 CLK4Q9HAZ1 481 aaKnown RBP5.14□□□□□ -1.59
HMGB3P9-201ENST00000441799 GP6Q9HCN6 339 aa5.14□□□□□ -1.59
HMGB3P9-201ENST00000441799 TBC1D22BQ9NU19 505 aa5.14□□□□□ -1.59
HMGB3P9-201ENST00000441799 AATFQ9NY61 560 aaKnown RBP eCLIP5.14□□□□□ -1.59
HMGB3P9-201ENST00000441799 ZIM2Q9NZV7 527 aa5.14□□□□□ -1.59
HMGB3P9-201ENST00000441799 PDP2Q9P2J9 529 aa5.14□□□□□ -1.59
HMGB3P9-201ENST00000441799 FBLN5Q9UBX5 448 aa5.14□□□□□ -1.59
HMGB3P9-201ENST00000441799 RGS17Q9UGC6 210 aaPredicted RBP5.14□□□□□ -1.59
HMGB3P9-201ENST00000441799 PALD1Q9ULE6 856 aa5.14□□□□□ -1.59
HMGB3P9-201ENST00000441799 COG5Q9UP83 839 aa5.14□□□□□ -1.59
HMGB3P9-201ENST00000441799 CD2APQ9Y5K6 639 aa5.14□□□□□ -1.59
HMGB3P9-201ENST00000441799 GMEB1Q9Y692 573 aa5.14□□□□□ -1.59
HMGB3P9-201ENST00000441799 SLC4A4Q9Y6R1 1079 aa5.14□□□□□ -1.59
HMGB3P9-201ENST00000441799 RIMS1Q86UR5 1692 aaKnown RBP5.14□□□□□ -1.59
HMGB3P9-201ENST00000441799 STRCQ7RTU9 1775 aa5.14□□□□□ -1.59
HMGB3P9-201ENST00000441799 NCOA3Q9Y6Q9 1424 aa5.14□□□□□ -1.59
HMGB3P9-201ENST00000441799 CCDC18Q5T9S5 1454 aa5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 ZCCHC11Q5TAX3 1644 aaKnown RBP5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 A0A1B0GUA9 196 aa5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 A0A1W2PQJ5 194 aa5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 EME2A4GXA9 379 aaPredicted RBP5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 H0Y626 953 aa5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 CETN3O15182 167 aa5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 MATN3O15232 486 aa5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 NVLO15381 856 aaKnown RBP5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 YKT6O15498 198 aa5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 AKAP10O43572 662 aa5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 AHCYL1O43865 530 aa5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 ZEB2O60315 1214 aa5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 PPP1R11O60927 126 aaPredicted RBP5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 DDHD2O94830 711 aa5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 SLITRK3O94933 977 aa5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 FESP07332 822 aa5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 IFNGR1P15260 489 aa5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 ALOX15P16050 662 aaPredicted RBP5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 STMN1P16949 149 aa5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 PBLDP30039 288 aaPredicted RBP5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 KRT20P35900 424 aa5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 RANBP1P43487 201 aa5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 CCT5P48643 541 aa5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 GTF2A2P52657 109 aa5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 PMS1P54277 932 aaKnown RBP5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 CORO7P57737 925 aa5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 GRSF1Q12849 480 aaKnown RBP eCLIP5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 ELF2Q15723 593 aa5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 KRBOX4Q5JUW0 171 aa5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 VPS53Q5VIR6 699 aa5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 OTUD7BQ6GQQ9 843 aa5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 FAM180BQ6P0A1 224 aa5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 CNSTQ6PJW8 725 aa5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 CYP2R1Q6VVX0 501 aa5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 SYT10Q6XYQ8 523 aa5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 IKBIPQ70UQ0 350 aa5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 CENPQQ7L2Z9 268 aaPredicted RBP5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 NANOGNBQ7Z5D8 188 aa5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 SPARTQ8N0X7 666 aa5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 NKAPQ8N5F7 415 aaKnown RBP5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 RNF10Q8N5U6 811 aaKnown RBP5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 NAT8LQ8N9F0 302 aa5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 PCSK9Q8NBP7 692 aaKnown RBP5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 NAXEQ8NCW5 288 aa5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 PPP1R14CQ8TAE6 165 aa5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 NKD1Q969G9 470 aa5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 CDCA5Q96FF9 252 aa5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 PDLIM2Q96JY6 352 aa5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 MTMR9Q96QG7 549 aa5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 ELAC2Q9BQ52 826 aaKnown RBP5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 PI4K2AQ9BTU6 479 aa5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 NT5C1AQ9BXI3 368 aa5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 AGXT2Q9BYV1 514 aa5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 PANK2Q9BZ23 570 aa5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 TRIM5Q9C035 493 aa5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 TRIM4Q9C037 500 aa5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 SERHL2Q9H4I8 314 aa5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 ELAC1Q9H777 363 aaKnown RBP5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 C8orf33Q9H7E9 229 aaPredicted RBP5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 PCDH18Q9HCL0 1135 aa5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 PLCB1Q9NQ66 1216 aa5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 SMPD4Q9NXE4 827 aa5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 MOCS1Q9NZB8 636 aa5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 ATPIF1Q9UII2 106 aa5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 GGT7Q9UJ14 662 aa5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 ROCK1Q13464 1354 aa5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 FGD6Q6ZV73 1430 aa5.13□□□□□ -1.59
HMGB3P9-201ENST00000441799 CTTNBP2Q8WZ74 1663 aa5.12□□□□□ -1.59
HMGB3P9-201ENST00000441799 GPR75-ASB3A0A0A6YYF3 556 aa5.12□□□□□ -1.59
HMGB3P9-201ENST00000441799 ESYT3A0FGR9 886 aa5.12□□□□□ -1.59
HMGB3P9-201ENST00000441799 MASP2O00187 686 aa5.12□□□□□ -1.59
HMGB3P9-201ENST00000441799 SLC7A4O43246 635 aa5.12□□□□□ -1.59
HMGB3P9-201ENST00000441799 XPOTO43592 962 aaKnown RBP5.12□□□□□ -1.59
HMGB3P9-201ENST00000441799 GFPT2O94808 682 aa5.12□□□□□ -1.59
HMGB3P9-201ENST00000441799 CSPG5O95196 566 aa5.12□□□□□ -1.59
HMGB3P9-201ENST00000441799 EPN2O95208 641 aa5.12□□□□□ -1.59
HMGB3P9-201ENST00000441799 MBD4O95243 580 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms