RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 CLIC2O15247 247 aa13.81□□□□□ -0.2
GPC1-204ENST00000426280 PRR29P0C7W0 189 aa13.81□□□□□ -0.2
GPC1-204ENST00000426280 KYAT1Q16773 422 aa13.81□□□□□ -0.2
GPC1-204ENST00000426280 LMBRD2Q68DH5 695 aaPredicted RBP13.81□□□□□ -0.2
GPC1-204ENST00000426280 PDXDC1Q6P996 788 aa13.81□□□□□ -0.2
GPC1-204ENST00000426280 CD302Q8IX05 232 aa13.81□□□□□ -0.2
GPC1-204ENST00000426280 NELFCDQ8IXH7 590 aa13.81□□□□□ -0.2
GPC1-204ENST00000426280 SYCP3Q8IZU3 236 aa13.81□□□□□ -0.2
GPC1-204ENST00000426280 RTP3Q9BQQ7 232 aa13.81□□□□□ -0.2
GPC1-204ENST00000426280 KCNK12Q9HB15 430 aa13.81□□□□□ -0.2
GPC1-204ENST00000426280 PDE11AQ9HCR9 933 aa13.81□□□□□ -0.2
GPC1-204ENST00000426280 SLC39A2Q9NP94 309 aa13.81□□□□□ -0.2
GPC1-204ENST00000426280 DPP3Q9NY33 737 aa13.81□□□□□ -0.2
GPC1-204ENST00000426280 FAM13BQ9NYF5 915 aa13.81□□□□□ -0.2
GPC1-204ENST00000426280 POLIQ9UNA4 740 aa13.81□□□□□ -0.2
GPC1-204ENST00000426280 NOTCH4Q99466 2003 aa13.81□□□□□ -0.2
GPC1-204ENST00000426280 MYO10Q9HD67 2058 aa13.81□□□□□ -0.2
GPC1-204ENST00000426280 OAZ2O95190 189 aa13.8□□□□□ -0.2
GPC1-204ENST00000426280 ATF2P15336 505 aa13.8□□□□□ -0.2
GPC1-204ENST00000426280 GARTP22102 1010 aa13.8□□□□□ -0.2
GPC1-204ENST00000426280 CMA1P23946 247 aa13.8□□□□□ -0.2
GPC1-204ENST00000426280 GBP2P32456 591 aaPredicted RBP13.8□□□□□ -0.2
GPC1-204ENST00000426280 NDUFA8P51970 172 aa13.8□□□□□ -0.2
GPC1-204ENST00000426280 STK4Q13043 487 aa13.8□□□□□ -0.2
GPC1-204ENST00000426280 POSTNQ15063 836 aa13.8□□□□□ -0.2
GPC1-204ENST00000426280 SLC5A9Q2M3M2 681 aa13.8□□□□□ -0.2
GPC1-204ENST00000426280 FAM26FQ5R3K3 315 aa13.8□□□□□ -0.2
GPC1-204ENST00000426280 IER5LQ5T953 404 aa13.8□□□□□ -0.2
GPC1-204ENST00000426280 DSTYKQ6XUX3 929 aa13.8□□□□□ -0.2
GPC1-204ENST00000426280 UNC13DQ70J99 1090 aa13.8□□□□□ -0.2
GPC1-204ENST00000426280 GET4Q7L5D6 327 aaPredicted RBP13.8□□□□□ -0.2
GPC1-204ENST00000426280 OTOP3Q7RTS5 596 aa13.8□□□□□ -0.2
GPC1-204ENST00000426280 CBWD2Q8IUF1 395 aa13.8□□□□□ -0.2
GPC1-204ENST00000426280 BRSK2Q8IWQ3 736 aa13.8□□□□□ -0.2
GPC1-204ENST00000426280 HS6ST3Q8IZP7 471 aa13.8□□□□□ -0.2
GPC1-204ENST00000426280 TTC9BQ8N6N2 239 aa13.8□□□□□ -0.2
GPC1-204ENST00000426280 BEST2Q8NFU1 509 aa13.8□□□□□ -0.2
GPC1-204ENST00000426280 NOC3LQ8WTT2 800 aaKnown RBP13.8□□□□□ -0.2
GPC1-204ENST00000426280 PGLYRP2Q96PD5 576 aa13.8□□□□□ -0.2
GPC1-204ENST00000426280 GZF1Q9H116 711 aaPredicted RBP13.8□□□□□ -0.2
GPC1-204ENST00000426280 EXOC7Q9UPT5 735 aa13.8□□□□□ -0.2
GPC1-204ENST00000426280 SORCS3Q9UPU3 1222 aa13.8□□□□□ -0.2
GPC1-204ENST00000426280 DERAQ9Y315 318 aa13.8□□□□□ -0.2
GPC1-204ENST00000426280 C2CD2Q9Y426 696 aa13.8□□□□□ -0.2
GPC1-204ENST00000426280 TRIOO75962 3097 aa13.8□□□□□ -0.2
GPC1-204ENST00000426280 FAM237AA0A1B0GTK4 181 aa13.79□□□□□ -0.2
GPC1-204ENST00000426280 H7C4K7 107 aa13.79□□□□□ -0.2
GPC1-204ENST00000426280 EXTL3O43909 919 aa13.79□□□□□ -0.2
GPC1-204ENST00000426280 HNRNPA1P09651 372 aaKnown RBP eCLIP13.79□□□□□ -0.2
GPC1-204ENST00000426280 SLFN14P0C7P3 912 aa13.79□□□□□ -0.2
GPC1-204ENST00000426280 LAMP2P13473 410 aa13.79□□□□□ -0.2
GPC1-204ENST00000426280 FSHRP23945 695 aa13.79□□□□□ -0.2
GPC1-204ENST00000426280 ABCD1P33897 745 aa13.79□□□□□ -0.2
GPC1-204ENST00000426280 CCR2P41597 374 aa13.79□□□□□ -0.2
GPC1-204ENST00000426280 VCPP55072 806 aaKnown RBP13.79□□□□□ -0.2
GPC1-204ENST00000426280 ADCY1Q08828 1119 aa13.79□□□□□ -0.2
GPC1-204ENST00000426280 SIGLEC14Q08ET2 396 aa13.79□□□□□ -0.2
GPC1-204ENST00000426280 UVSSAQ2YD98 709 aa13.79□□□□□ -0.2
GPC1-204ENST00000426280 LIN9Q5TKA1 542 aa13.79□□□□□ -0.2
GPC1-204ENST00000426280 CYP26C1Q6V0L0 522 aa13.79□□□□□ -0.2
GPC1-204ENST00000426280 LRRTM3Q86VH5 581 aa13.79□□□□□ -0.2
GPC1-204ENST00000426280 TCEAL8Q8IYN2 117 aa13.79□□□□□ -0.2
GPC1-204ENST00000426280 PLCD3Q8N3E9 789 aa13.79□□□□□ -0.2
GPC1-204ENST00000426280 C1orf127Q8N9H9 656 aa13.79□□□□□ -0.2
GPC1-204ENST00000426280 RDH13Q8NBN7 331 aa13.79□□□□□ -0.2
GPC1-204ENST00000426280 OR5B17Q8NGF7 314 aa13.79□□□□□ -0.2
GPC1-204ENST00000426280 OR10T2Q8NGX3 314 aa13.79□□□□□ -0.2
GPC1-204ENST00000426280 PBXIP1Q96AQ6 731 aa13.79□□□□□ -0.2
GPC1-204ENST00000426280 TCEAL4Q96EI5 215 aa13.79□□□□□ -0.2
GPC1-204ENST00000426280 CYP4F11Q9HBI6 524 aa13.79□□□□□ -0.2
GPC1-204ENST00000426280 CEP72Q9P209 647 aa13.79□□□□□ -0.2
GPC1-204ENST00000426280 EPS15L1Q9UBC2 864 aa13.79□□□□□ -0.2
GPC1-204ENST00000426280 DPP7Q9UHL4 492 aa13.79□□□□□ -0.2
GPC1-204ENST00000426280 SIX4Q9UIU6 781 aa13.79□□□□□ -0.2
GPC1-204ENST00000426280 SLC27A5Q9Y2P5 690 aa13.79□□□□□ -0.2
GPC1-204ENST00000426280 SCN1AP35498 2009 aa13.78□□□□□ -0.2
GPC1-204ENST00000426280 ARHGEF37A1IGU5 675 aa13.78□□□□□ -0.2
GPC1-204ENST00000426280 HCRTO43612 131 aa13.78□□□□□ -0.2
GPC1-204ENST00000426280 MOSPD3O75425 235 aa13.78□□□□□ -0.2
GPC1-204ENST00000426280 SOAT2O75908 522 aa13.78□□□□□ -0.2
GPC1-204ENST00000426280 HOXA9P31269 272 aa13.78□□□□□ -0.2
GPC1-204ENST00000426280 TFAMQ00059 246 aaKnown RBP13.78□□□□□ -0.2
GPC1-204ENST00000426280 AMPD3Q01432 767 aa13.78□□□□□ -0.2
GPC1-204ENST00000426280 POU5F1Q01860 360 aaKnown RBP13.78□□□□□ -0.2
GPC1-204ENST00000426280 YWHAHQ04917 246 aaPredicted RBP13.78□□□□□ -0.2
GPC1-204ENST00000426280 ALCAMQ13740 583 aa13.78□□□□□ -0.2
GPC1-204ENST00000426280 CCDC142Q17RM4 750 aa13.78□□□□□ -0.2
GPC1-204ENST00000426280 KMT5BQ4FZB7 885 aa13.78□□□□□ -0.2
GPC1-204ENST00000426280 WSCD1Q658N2 575 aa13.78□□□□□ -0.2
GPC1-204ENST00000426280 ZNF280DQ6N043 979 aa13.78□□□□□ -0.2
GPC1-204ENST00000426280 ARMCX5Q6P1M9 558 aa13.78□□□□□ -0.2
GPC1-204ENST00000426280 PARM1Q6UWI2 310 aa13.78□□□□□ -0.2
GPC1-204ENST00000426280 BMP8AQ7Z5Y6 402 aa13.78□□□□□ -0.2
GPC1-204ENST00000426280 GPD1LQ8N335 351 aa13.78□□□□□ -0.2
GPC1-204ENST00000426280 SLC44A3Q8N4M1 653 aa13.78□□□□□ -0.2
GPC1-204ENST00000426280 ATAD1Q8NBU5 361 aa13.78□□□□□ -0.2
GPC1-204ENST00000426280 KIAA0895Q8NCT3 520 aa13.78□□□□□ -0.2
GPC1-204ENST00000426280 APPL2Q8NEU8 664 aa13.78□□□□□ -0.2
GPC1-204ENST00000426280 PLEKHO2Q8TD55 490 aa13.78□□□□□ -0.2
GPC1-204ENST00000426280 ING5Q8WYH8 240 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms