RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 DAW1Q8N136 415 aa16.96■□□□□ 0.31
SBDSP1-201ENST00000415772 C4orf32Q8N8J7 132 aa16.96■□□□□ 0.31
SBDSP1-201ENST00000415772 PGLYRP2Q96PD5 576 aa16.96■□□□□ 0.31
SBDSP1-201ENST00000415772 CHRDQ9H2X0 955 aa16.96■□□□□ 0.31
SBDSP1-201ENST00000415772 TRPV5Q9NQA5 729 aa16.96■□□□□ 0.31
SBDSP1-201ENST00000415772 LARSQ9P2J5 1176 aaKnown RBP16.96■□□□□ 0.31
SBDSP1-201ENST00000415772 TUBGCP4Q9UGJ1 667 aa16.96■□□□□ 0.31
SBDSP1-201ENST00000415772 UBQLN1Q9UMX0 589 aaKnown RBP16.96■□□□□ 0.31
SBDSP1-201ENST00000415772 YIPF1Q9Y548 306 aa16.96■□□□□ 0.31
SBDSP1-201ENST00000415772 FANCMQ8IYD8 2048 aa16.96■□□□□ 0.3
SBDSP1-201ENST00000415772 DOCK6Q96HP0 2047 aa16.96■□□□□ 0.3
SBDSP1-201ENST00000415772 LILRB5O75023 590 aa16.95■□□□□ 0.3
SBDSP1-201ENST00000415772 CLTAP09496 248 aa16.95■□□□□ 0.3
SBDSP1-201ENST00000415772 CXCL8P10145 99 aa16.95■□□□□ 0.3
SBDSP1-201ENST00000415772 CCNE1P24864 410 aa16.95■□□□□ 0.3
SBDSP1-201ENST00000415772 GUCY2CP25092 1073 aa16.95■□□□□ 0.3
SBDSP1-201ENST00000415772 CXCL12P48061 93 aa16.95■□□□□ 0.3
SBDSP1-201ENST00000415772 LIG4P49917 911 aa16.95■□□□□ 0.3
SBDSP1-201ENST00000415772 SPAG1Q07617 926 aa16.95■□□□□ 0.3
SBDSP1-201ENST00000415772 TEAD2Q15562 447 aa16.95■□□□□ 0.3
SBDSP1-201ENST00000415772 LPAL2Q16609 132 aa16.95■□□□□ 0.3
SBDSP1-201ENST00000415772 KYAT1Q16773 422 aa16.95■□□□□ 0.3
SBDSP1-201ENST00000415772 SLC10A6Q3KNW5 377 aa16.95■□□□□ 0.3
SBDSP1-201ENST00000415772 ZPBP2Q6X784 338 aa16.95■□□□□ 0.3
SBDSP1-201ENST00000415772 C1orf186Q6ZWK4 172 aa16.95■□□□□ 0.3
SBDSP1-201ENST00000415772 MFSD6LQ8IWD5 586 aa16.95■□□□□ 0.3
SBDSP1-201ENST00000415772 SPIRE2Q8WWL2 714 aa16.95■□□□□ 0.3
SBDSP1-201ENST00000415772 FAM212AQ96EL1 285 aa16.95■□□□□ 0.3
SBDSP1-201ENST00000415772 MSANTD3Q96H12 275 aa16.95■□□□□ 0.3
SBDSP1-201ENST00000415772 ZSWIM3Q96MP5 696 aa16.95■□□□□ 0.3
SBDSP1-201ENST00000415772 PLEKHA5Q9HAU0 1116 aa16.95■□□□□ 0.3
SBDSP1-201ENST00000415772 CEP72Q9P209 647 aa16.95■□□□□ 0.3
SBDSP1-201ENST00000415772 TIMM13Q9Y5L4 95 aaPredicted RBP16.95■□□□□ 0.3
SBDSP1-201ENST00000415772 A0A1W2PRU2 124 aa16.94■□□□□ 0.3
SBDSP1-201ENST00000415772 OR6C75A6NL08 312 aa16.94■□□□□ 0.3
SBDSP1-201ENST00000415772 HEPACAM2A8MVW5 462 aa16.94■□□□□ 0.3
SBDSP1-201ENST00000415772 U2AF2P26368 475 aaKnown RBP eCLIP16.94■□□□□ 0.3
SBDSP1-201ENST00000415772 TAF12Q16514 161 aa16.94■□□□□ 0.3
SBDSP1-201ENST00000415772 ARHGAP15Q53QZ3 475 aa16.94■□□□□ 0.3
SBDSP1-201ENST00000415772 LAIR1Q6GTX8 287 aa16.94■□□□□ 0.3
SBDSP1-201ENST00000415772 CELF5Q8N6W0 485 aaKnown RBP16.94■□□□□ 0.3
SBDSP1-201ENST00000415772 GCNAQ96QF7 691 aa16.94■□□□□ 0.3
SBDSP1-201ENST00000415772 PLIN2Q99541 437 aa16.94■□□□□ 0.3
SBDSP1-201ENST00000415772 NTPCRQ9BSD7 190 aaKnown RBP16.94■□□□□ 0.3
SBDSP1-201ENST00000415772 C8orf33Q9H7E9 229 aaPredicted RBP16.94■□□□□ 0.3
SBDSP1-201ENST00000415772 TRIP11Q15643 1979 aa16.93■□□□□ 0.3
SBDSP1-201ENST00000415772 NOTCH4Q99466 2003 aa16.93■□□□□ 0.3
SBDSP1-201ENST00000415772 FGF19O95750 216 aa16.93■□□□□ 0.3
SBDSP1-201ENST00000415772 KRT18P05783 430 aaKnown RBP16.93■□□□□ 0.3
SBDSP1-201ENST00000415772 ODC1P11926 461 aa16.93■□□□□ 0.3
SBDSP1-201ENST00000415772 MCL1Q07820 350 aa16.93■□□□□ 0.3
SBDSP1-201ENST00000415772 SPEM2Q0P670 501 aa16.93■□□□□ 0.3
SBDSP1-201ENST00000415772 MAPK7Q13164 816 aa16.93■□□□□ 0.3
SBDSP1-201ENST00000415772 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.93■□□□□ 0.3
SBDSP1-201ENST00000415772 MAP4K3Q8IVH8 894 aa16.93■□□□□ 0.3
SBDSP1-201ENST00000415772 KCTD17Q8N5Z5 321 aa16.93■□□□□ 0.3
SBDSP1-201ENST00000415772 TMEM161BQ8NDZ6 487 aa16.93■□□□□ 0.3
SBDSP1-201ENST00000415772 BEST2Q8NFU1 509 aa16.93■□□□□ 0.3
SBDSP1-201ENST00000415772 RASSF8Q8NHQ8 419 aa16.93■□□□□ 0.3
SBDSP1-201ENST00000415772 NELL1Q92832 810 aa16.93■□□□□ 0.3
SBDSP1-201ENST00000415772 RTKNQ9BST9 563 aa16.93■□□□□ 0.3
SBDSP1-201ENST00000415772 ATXN3LQ9H3M9 355 aa16.93■□□□□ 0.3
SBDSP1-201ENST00000415772 RPF1Q9H9Y2 349 aaKnown RBP16.93■□□□□ 0.3
SBDSP1-201ENST00000415772 TRPV4Q9HBA0 871 aa16.93■□□□□ 0.3
SBDSP1-201ENST00000415772 KCND2Q9NZV8 630 aa16.93■□□□□ 0.3
SBDSP1-201ENST00000415772 GVINP1Q7Z2Y8 2422 aa16.92■□□□□ 0.3
SBDSP1-201ENST00000415772 CITO14578 2027 aa16.92■□□□□ 0.3
SBDSP1-201ENST00000415772 SLC38A8A6NNN8 435 aa16.92■□□□□ 0.3
SBDSP1-201ENST00000415772 M0QZQ0 153 aa16.92■□□□□ 0.3
SBDSP1-201ENST00000415772 ABLIM1O14639 778 aa16.92■□□□□ 0.3
SBDSP1-201ENST00000415772 HNRNPDLO14979 420 aaKnown RBP16.92■□□□□ 0.3
SBDSP1-201ENST00000415772 CHADO15335 359 aa16.92■□□□□ 0.3
SBDSP1-201ENST00000415772 OR4Q2P0C623 313 aa16.92■□□□□ 0.3
SBDSP1-201ENST00000415772 MAPTP10636 758 aaKnown RBP16.92■□□□□ 0.3
SBDSP1-201ENST00000415772 CYP3A5P20815 502 aa16.92■□□□□ 0.3
SBDSP1-201ENST00000415772 MCM2P49736 904 aa16.92■□□□□ 0.3
SBDSP1-201ENST00000415772 ATXN1P54253 815 aaKnown RBP16.92■□□□□ 0.3
SBDSP1-201ENST00000415772 EPHA5P54756 1037 aa16.92■□□□□ 0.3
SBDSP1-201ENST00000415772 DUSP4Q13115 394 aa16.92■□□□□ 0.3
SBDSP1-201ENST00000415772 FZD5Q13467 585 aa16.92■□□□□ 0.3
SBDSP1-201ENST00000415772 SIM2Q14190 667 aaPredicted RBP16.92■□□□□ 0.3
SBDSP1-201ENST00000415772 VEPH1Q14D04 833 aa16.92■□□□□ 0.3
SBDSP1-201ENST00000415772 RILPL1Q5EBL4 403 aa16.92■□□□□ 0.3
SBDSP1-201ENST00000415772 OVOS1Q6IE37 1185 aa16.92■□□□□ 0.3
SBDSP1-201ENST00000415772 KCNK18Q7Z418 384 aa16.92■□□□□ 0.3
SBDSP1-201ENST00000415772 ITIH5Q86UX2 942 aa16.92■□□□□ 0.3
SBDSP1-201ENST00000415772 SYT2Q8N9I0 419 aaPredicted RBP16.92■□□□□ 0.3
SBDSP1-201ENST00000415772 SHKBP1Q8TBC3 707 aa16.92■□□□□ 0.3
SBDSP1-201ENST00000415772 ASB3Q9Y575 518 aa16.92■□□□□ 0.3
SBDSP1-201ENST00000415772 TICRRQ7Z2Z1 1910 aa16.92■□□□□ 0.3
SBDSP1-201ENST00000415772 ZNF292O60281 2723 aa16.91■□□□□ 0.3
SBDSP1-201ENST00000415772 VWA3AA6NCI4 1184 aa16.91■□□□□ 0.3
SBDSP1-201ENST00000415772 H3BQV1 296 aa16.91■□□□□ 0.3
SBDSP1-201ENST00000415772 TULP1O00294 542 aaPredicted RBP16.91■□□□□ 0.3
SBDSP1-201ENST00000415772 FAM13AO94988 1023 aa16.91■□□□□ 0.3
SBDSP1-201ENST00000415772 OAZ2O95190 189 aa16.91■□□□□ 0.3
SBDSP1-201ENST00000415772 PLA2G4BP0C869 781 aa16.91■□□□□ 0.3
SBDSP1-201ENST00000415772 LRPAP1P30533 357 aa16.91■□□□□ 0.3
SBDSP1-201ENST00000415772 TOB1P50616 345 aaPredicted RBP16.91■□□□□ 0.3
SBDSP1-201ENST00000415772 CACNB1Q02641 598 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms