RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 HEATR9A2RTY3 570 aa19.35■□□□□ 0.69
SHANK3-202ENST00000414786 IL6STP40189 918 aaPredicted RBP19.35■□□□□ 0.69
SHANK3-202ENST00000414786 RHOT2Q8IXI1 618 aa19.35■□□□□ 0.69
SHANK3-202ENST00000414786 MED8Q96G25 268 aa19.35■□□□□ 0.69
SHANK3-202ENST00000414786 CINPQ9BW66 212 aaPredicted RBP19.35■□□□□ 0.69
SHANK3-202ENST00000414786 PRIM2P49643 509 aa19.35■□□□□ 0.69
SHANK3-202ENST00000414786 KIF23Q02241 960 aaPredicted RBP19.35■□□□□ 0.69
SHANK3-202ENST00000414786 STARD3Q14849 445 aa19.35■□□□□ 0.69
SHANK3-202ENST00000414786 TMEM132DQ14C87 1099 aa19.35■□□□□ 0.69
SHANK3-202ENST00000414786 CYP4A22Q5TCH4 519 aa19.35■□□□□ 0.69
SHANK3-202ENST00000414786 WWOXQ9NZC7 414 aa19.35■□□□□ 0.69
SHANK3-202ENST00000414786 DNAJC5BQ9UF47 199 aa19.35■□□□□ 0.69
SHANK3-202ENST00000414786 NMT1P30419 496 aaKnown RBP19.35■□□□□ 0.69
SHANK3-202ENST00000414786 SEZ6Q53EL9 994 aa19.35■□□□□ 0.69
SHANK3-202ENST00000414786 MIB1Q86YT6 1006 aa19.35■□□□□ 0.69
SHANK3-202ENST00000414786 PRMT1Q99873 361 aaKnown RBP19.35■□□□□ 0.69
SHANK3-202ENST00000414786 GALNT8Q9NY28 637 aa19.35■□□□□ 0.69
SHANK3-202ENST00000414786 STMN3Q9NZ72 180 aa19.35■□□□□ 0.69
SHANK3-202ENST00000414786 PADI4Q9UM07 663 aa19.35■□□□□ 0.69
SHANK3-202ENST00000414786 COL17A1Q9UMD9 1497 aaPredicted RBP19.35■□□□□ 0.69
SHANK3-202ENST00000414786 SMNDC1O75940 238 aaKnown RBP eCLIP19.35■□□□□ 0.69
SHANK3-202ENST00000414786 KRT20P35900 424 aa19.35■□□□□ 0.69
SHANK3-202ENST00000414786 FNTAP49354 379 aa19.35■□□□□ 0.69
SHANK3-202ENST00000414786 RAD23BP54727 409 aa19.35■□□□□ 0.69
SHANK3-202ENST00000414786 NANOGNBQ7Z5D8 188 aa19.35■□□□□ 0.69
SHANK3-202ENST00000414786 NEDD4P46934 1319 aa19.34■□□□□ 0.69
SHANK3-202ENST00000414786 ARID5BQ14865 1188 aa19.34■□□□□ 0.69
SHANK3-202ENST00000414786 DOK6Q6PKX4 331 aa19.34■□□□□ 0.69
SHANK3-202ENST00000414786 TTC13Q8NBP0 860 aa19.34■□□□□ 0.69
SHANK3-202ENST00000414786 PMM1Q92871 262 aa19.34■□□□□ 0.69
SHANK3-202ENST00000414786 CHURC1-FNTBB4DL54 471 aa19.34■□□□□ 0.69
SHANK3-202ENST00000414786 PMPCBO75439 489 aa19.34■□□□□ 0.69
SHANK3-202ENST00000414786 WEE2P0C1S8 567 aa19.34■□□□□ 0.69
SHANK3-202ENST00000414786 ITGAXP20702 1163 aa19.34■□□□□ 0.69
SHANK3-202ENST00000414786 NFIL3Q16649 462 aa19.34■□□□□ 0.69
SHANK3-202ENST00000414786 OXER1Q8TDS5 423 aa19.34■□□□□ 0.69
SHANK3-202ENST00000414786 KLF6Q99612 283 aaPredicted RBP19.34■□□□□ 0.69
SHANK3-202ENST00000414786 EPN3Q9H201 632 aa19.34■□□□□ 0.69
SHANK3-202ENST00000414786 ATP6V1HQ9UI12 483 aa19.34■□□□□ 0.69
SHANK3-202ENST00000414786 CNGA3Q16281 694 aa19.34■□□□□ 0.69
SHANK3-202ENST00000414786 CAND2O75155 1236 aa19.34■□□□□ 0.69
SHANK3-202ENST00000414786 GGPS1O95749 300 aa19.34■□□□□ 0.69
SHANK3-202ENST00000414786 PRR29P0C7W0 189 aa19.34■□□□□ 0.69
SHANK3-202ENST00000414786 PLA2G4FQ68DD2 849 aa19.34■□□□□ 0.69
SHANK3-202ENST00000414786 PIGBQ92521 554 aa19.34■□□□□ 0.69
SHANK3-202ENST00000414786 H2AFYO75367 372 aaKnown RBP19.34■□□□□ 0.69
SHANK3-202ENST00000414786 B3GALNT2Q8NCR0 500 aa19.34■□□□□ 0.69
SHANK3-202ENST00000414786 TUBGCP3Q96CW5 907 aa19.34■□□□□ 0.69
SHANK3-202ENST00000414786 RHBGQ9H310 441 aa19.34■□□□□ 0.69
SHANK3-202ENST00000414786 TPST1O60507 370 aa19.34■□□□□ 0.69
SHANK3-202ENST00000414786 HOXB7P09629 217 aa19.34■□□□□ 0.69
SHANK3-202ENST00000414786 CCDC137Q6PK04 289 aaKnown RBP19.34■□□□□ 0.69
SHANK3-202ENST00000414786 RAD54LQ92698 747 aa19.34■□□□□ 0.69
SHANK3-202ENST00000414786 LSG1Q9H089 658 aaKnown RBP19.34■□□□□ 0.69
SHANK3-202ENST00000414786 RAB6BQ9NRW1 208 aa19.34■□□□□ 0.69
SHANK3-202ENST00000414786 LIMA1Q9UHB6 759 aaKnown RBP19.34■□□□□ 0.69
SHANK3-202ENST00000414786 XPO7Q9UIA9 1087 aaKnown RBP19.34■□□□□ 0.69
SHANK3-202ENST00000414786 POLR1DQ9Y2S0 133 aa19.34■□□□□ 0.69
SHANK3-202ENST00000414786 ICE2Q659A1 982 aa19.33■□□□□ 0.69
SHANK3-202ENST00000414786 STRNO43815 780 aa19.33■□□□□ 0.69
SHANK3-202ENST00000414786 GMFGO60234 142 aa19.33■□□□□ 0.69
SHANK3-202ENST00000414786 ZBED6P86452 979 aa19.33■□□□□ 0.69
SHANK3-202ENST00000414786 ANGEL2Q5VTE6 544 aaKnown RBP19.33■□□□□ 0.69
SHANK3-202ENST00000414786 IER5Q5VY09 327 aa19.33■□□□□ 0.69
SHANK3-202ENST00000414786 TMEM47Q9BQJ4 181 aa19.33■□□□□ 0.69
SHANK3-202ENST00000414786 JPH1Q9HDC5 661 aaPredicted RBP19.33■□□□□ 0.69
SHANK3-202ENST00000414786 E9PBE3 544 aa19.33■□□□□ 0.68
SHANK3-202ENST00000414786 GSSP48637 474 aa19.33■□□□□ 0.68
SHANK3-202ENST00000414786 CNGA2Q16280 664 aa19.33■□□□□ 0.68
SHANK3-202ENST00000414786 GLB1LQ6UWU2 654 aa19.33■□□□□ 0.68
SHANK3-202ENST00000414786 POLG2Q9UHN1 485 aa19.33■□□□□ 0.68
SHANK3-202ENST00000414786 KIAA0586Q9BVV6 1533 aa19.33■□□□□ 0.68
SHANK3-202ENST00000414786 AK9Q5TCS8 1911 aa19.33■□□□□ 0.68
SHANK3-202ENST00000414786 CAMK2GQ13555 558 aaPredicted RBP19.33■□□□□ 0.68
SHANK3-202ENST00000414786 CCDC60Q8IWA6 550 aaPredicted RBP19.33■□□□□ 0.68
SHANK3-202ENST00000414786 PARVAQ9NVD7 372 aa19.33■□□□□ 0.68
SHANK3-202ENST00000414786 ARAP3Q8WWN8 1544 aa19.33■□□□□ 0.68
SHANK3-202ENST00000414786 ANO5Q75V66 913 aa19.33■□□□□ 0.68
SHANK3-202ENST00000414786 CCL15-CCL14A0A0B4J2E2 113 aa19.32■□□□□ 0.68
SHANK3-202ENST00000414786 TEX33O43247 280 aa19.32■□□□□ 0.68
SHANK3-202ENST00000414786 PRPF3O43395 683 aaKnown RBP19.32■□□□□ 0.68
SHANK3-202ENST00000414786 TBXAS1P24557 533 aaPredicted RBP19.32■□□□□ 0.68
SHANK3-202ENST00000414786 ALCAMQ13740 583 aa19.32■□□□□ 0.68
SHANK3-202ENST00000414786 CCL15Q16663 113 aa19.32■□□□□ 0.68
SHANK3-202ENST00000414786 CLEC10AQ8IUN9 316 aa19.32■□□□□ 0.68
SHANK3-202ENST00000414786 MS4A14Q96JA4 679 aa19.32■□□□□ 0.68
SHANK3-202ENST00000414786 TDP2O95551 362 aa19.32■□□□□ 0.68
SHANK3-202ENST00000414786 PRCPP42785 496 aa19.32■□□□□ 0.68
SHANK3-202ENST00000414786 GOLGA7BQ2TAP0 167 aa19.32■□□□□ 0.68
SHANK3-202ENST00000414786 OPTNQ96CV9 577 aa19.32■□□□□ 0.68
SHANK3-202ENST00000414786 HACL1Q9UJ83 578 aa19.32■□□□□ 0.68
SHANK3-202ENST00000414786 PEX1O43933 1283 aa19.32■□□□□ 0.68
SHANK3-202ENST00000414786 CLUP10909 449 aa19.32■□□□□ 0.68
SHANK3-202ENST00000414786 DSG3P32926 999 aa19.32■□□□□ 0.68
SHANK3-202ENST00000414786 CASP8Q14790 479 aa19.32■□□□□ 0.68
SHANK3-202ENST00000414786 TEDDM1Q5T9Z0 273 aa19.32■□□□□ 0.68
SHANK3-202ENST00000414786 RABGGTAQ92696 567 aa19.32■□□□□ 0.68
SHANK3-202ENST00000414786 CHST12Q9NRB3 414 aa19.32■□□□□ 0.68
SHANK3-202ENST00000414786 FGFR2P21802 821 aa19.32■□□□□ 0.68
SHANK3-202ENST00000414786 RBBP4Q09028 425 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms