RNA–Protein interactions for RNA: ENST00000406451.8

HDAC9-204, Transcript of histone deacetylase 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HDAC9, Length 9,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-204ENST00000406451 VCX3AQ9NNX9 186 aa5.24□□□□□ -1.57
HDAC9-204ENST00000406451 AGPAT3Q9NRZ7 376 aa5.24□□□□□ -1.57
HDAC9-204ENST00000406451 AFF4Q9UHB7 1163 aaKnown RBP5.24□□□□□ -1.57
HDAC9-204ENST00000406451 STK38LQ9Y2H1 464 aa5.24□□□□□ -1.57
HDAC9-204ENST00000406451 FAM208AQ9UK61 1670 aaKnown RBP5.24□□□□□ -1.57
HDAC9-204ENST00000406451 CARNS1A5YM72 827 aa5.24□□□□□ -1.57
HDAC9-204ENST00000406451 C3orf70A6NLC5 250 aaPredicted RBP5.24□□□□□ -1.57
HDAC9-204ENST00000406451 TXNDC9O14530 226 aa5.24□□□□□ -1.57
HDAC9-204ENST00000406451 TEX33O43247 280 aa5.24□□□□□ -1.57
HDAC9-204ENST00000406451 PCK1P35558 622 aa5.24□□□□□ -1.57
HDAC9-204ENST00000406451 ARL4DP49703 201 aa5.24□□□□□ -1.57
HDAC9-204ENST00000406451 OCRLQ01968 901 aa5.24□□□□□ -1.57
HDAC9-204ENST00000406451 SYTL3Q4VX76 610 aa5.24□□□□□ -1.57
HDAC9-204ENST00000406451 ATG16L1Q676U5 607 aa5.24□□□□□ -1.57
HDAC9-204ENST00000406451 TRIM59Q8IWR1 403 aa5.24□□□□□ -1.57
HDAC9-204ENST00000406451 FOPNLQ96NB1 174 aa5.24□□□□□ -1.57
HDAC9-204ENST00000406451 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.24□□□□□ -1.57
HDAC9-204ENST00000406451 TINF2Q9BSI4 451 aa5.24□□□□□ -1.57
HDAC9-204ENST00000406451 ANO9A1A5B4 782 aa5.24□□□□□ -1.57
HDAC9-204ENST00000406451 MED24O75448 989 aa5.24□□□□□ -1.57
HDAC9-204ENST00000406451 MBL2P11226 248 aaPredicted RBP5.24□□□□□ -1.57
HDAC9-204ENST00000406451 RALBP11234 206 aa5.24□□□□□ -1.57
HDAC9-204ENST00000406451 IMPG1Q17R60 797 aa5.24□□□□□ -1.57
HDAC9-204ENST00000406451 KLHL38Q2WGJ6 581 aa5.24□□□□□ -1.57
HDAC9-204ENST00000406451 GLE1Q53GS7 698 aaKnown RBP5.24□□□□□ -1.57
HDAC9-204ENST00000406451 C6orf118Q5T5N4 469 aa5.24□□□□□ -1.57
HDAC9-204ENST00000406451 TBC1D19Q8N5T2 526 aa5.24□□□□□ -1.57
HDAC9-204ENST00000406451 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.24□□□□□ -1.57
HDAC9-204ENST00000406451 HTATIP2Q9BUP3 242 aa5.24□□□□□ -1.57
HDAC9-204ENST00000406451 KRT82Q9NSB4 513 aa5.24□□□□□ -1.57
HDAC9-204ENST00000406451 DBR1Q9UK59 544 aaKnown RBP5.24□□□□□ -1.57
HDAC9-204ENST00000406451 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.24□□□□□ -1.57
HDAC9-204ENST00000406451 ORC6Q9Y5N6 252 aa5.24□□□□□ -1.57
HDAC9-204ENST00000406451 KCNN4O15554 427 aa5.24□□□□□ -1.57
HDAC9-204ENST00000406451 GHRP10912 638 aa5.24□□□□□ -1.57
HDAC9-204ENST00000406451 MAP4P27816 1152 aaKnown RBP5.24□□□□□ -1.57
HDAC9-204ENST00000406451 CNTN2Q02246 1040 aa5.24□□□□□ -1.57
HDAC9-204ENST00000406451 RIOX2Q8IUF8 465 aa5.24□□□□□ -1.57
HDAC9-204ENST00000406451 C4orf19Q8IY42 314 aa5.24□□□□□ -1.57
HDAC9-204ENST00000406451 ATP6V0D2Q8N8Y2 350 aa5.24□□□□□ -1.57
HDAC9-204ENST00000406451 IL17RAQ96F46 866 aa5.24□□□□□ -1.57
HDAC9-204ENST00000406451 RSRC1Q96IZ7 334 aaKnown RBP5.24□□□□□ -1.57
HDAC9-204ENST00000406451 H0Y626 953 aa5.24□□□□□ -1.57
HDAC9-204ENST00000406451 COPEO14579 308 aa5.24□□□□□ -1.57
HDAC9-204ENST00000406451 PSMD3O43242 534 aa5.24□□□□□ -1.57
HDAC9-204ENST00000406451 HSPA4LO95757 839 aa5.24□□□□□ -1.57
HDAC9-204ENST00000406451 FDPSP14324 419 aaKnown RBP5.24□□□□□ -1.57
HDAC9-204ENST00000406451 GTF2H1P32780 548 aa5.24□□□□□ -1.57
HDAC9-204ENST00000406451 NFE2Q16621 373 aaPredicted RBP5.24□□□□□ -1.57
HDAC9-204ENST00000406451 TTC31Q49AM3 519 aaPredicted RBP5.24□□□□□ -1.57
HDAC9-204ENST00000406451 NIPA1Q7RTP0 329 aa5.24□□□□□ -1.57
HDAC9-204ENST00000406451 CDK5RAP1Q96SZ6 601 aaKnown RBP5.24□□□□□ -1.57
HDAC9-204ENST00000406451 LIMA1Q9UHB6 759 aaKnown RBP5.24□□□□□ -1.57
HDAC9-204ENST00000406451 A0A087WZ62 844 aa5.24□□□□□ -1.57
HDAC9-204ENST00000406451 TTLL13PA6NNM8 815 aa5.24□□□□□ -1.57
HDAC9-204ENST00000406451 ALDH2P05091 517 aa5.24□□□□□ -1.57
HDAC9-204ENST00000406451 GARTP22102 1010 aa5.24□□□□□ -1.57
HDAC9-204ENST00000406451 DNAJB2P25686 324 aa5.24□□□□□ -1.57
HDAC9-204ENST00000406451 AVPR1AP37288 418 aa5.24□□□□□ -1.57
HDAC9-204ENST00000406451 CCT5P48643 541 aa5.24□□□□□ -1.57
HDAC9-204ENST00000406451 AMPD2Q01433 879 aa5.24□□□□□ -1.57
HDAC9-204ENST00000406451 CUL2Q13617 745 aa5.24□□□□□ -1.57
HDAC9-204ENST00000406451 PDK1Q15118 436 aa5.24□□□□□ -1.57
HDAC9-204ENST00000406451 ZNF677Q86XU0 584 aa5.24□□□□□ -1.57
HDAC9-204ENST00000406451 ZFPM1Q8IX07 1006 aa5.24□□□□□ -1.57
HDAC9-204ENST00000406451 APBA2Q99767 749 aa5.24□□□□□ -1.57
HDAC9-204ENST00000406451 FDXACB1Q9BRP7 624 aaPredicted RBP5.24□□□□□ -1.57
HDAC9-204ENST00000406451 NFU1Q9UMS0 254 aa5.24□□□□□ -1.57
HDAC9-204ENST00000406451 SNX24Q9Y343 169 aa5.24□□□□□ -1.57
HDAC9-204ENST00000406451 TAF6LQ9Y6J9 622 aa5.24□□□□□ -1.57
HDAC9-204ENST00000406451 GAKO14976 1311 aa5.23□□□□□ -1.57
HDAC9-204ENST00000406451 NALCNQ8IZF0 1738 aa5.23□□□□□ -1.57
HDAC9-204ENST00000406451 GRID2IPA4D2P6 1211 aa5.23□□□□□ -1.57
HDAC9-204ENST00000406451 CTDNEP1O95476 244 aa5.23□□□□□ -1.57
HDAC9-204ENST00000406451 BRD2P25440 801 aaKnown RBP5.23□□□□□ -1.57
HDAC9-204ENST00000406451 LHX1P48742 406 aa5.23□□□□□ -1.57
HDAC9-204ENST00000406451 SEC23AQ15436 765 aa5.23□□□□□ -1.57
HDAC9-204ENST00000406451 CATSPERGQ6ZRH7 1159 aa5.23□□□□□ -1.57
HDAC9-204ENST00000406451 KDELC2Q7Z4H8 507 aa5.23□□□□□ -1.57
HDAC9-204ENST00000406451 MAML1Q92585 1016 aa5.23□□□□□ -1.57
HDAC9-204ENST00000406451 BHMTQ93088 406 aa5.23□□□□□ -1.57
HDAC9-204ENST00000406451 SNF8Q96H20 258 aa5.23□□□□□ -1.57
HDAC9-204ENST00000406451 BCL2L12Q9HB09 334 aa5.23□□□□□ -1.57
HDAC9-204ENST00000406451 KLHL11Q9NVR0 708 aa5.23□□□□□ -1.57
HDAC9-204ENST00000406451 FAM198AQ9UFP1 575 aa5.23□□□□□ -1.57
HDAC9-204ENST00000406451 SUN2Q9UH99 717 aa5.23□□□□□ -1.57
HDAC9-204ENST00000406451 TSR3Q9UJK0 312 aaKnown RBP5.23□□□□□ -1.57
HDAC9-204ENST00000406451 GLTPD2A6NH11 291 aa5.23□□□□□ -1.57
HDAC9-204ENST00000406451 RSPH10B2B2RC85 870 aa5.23□□□□□ -1.57
HDAC9-204ENST00000406451 KRT14P02533 472 aa5.23□□□□□ -1.57
HDAC9-204ENST00000406451 RSPH10BP0C881 870 aa5.23□□□□□ -1.57
HDAC9-204ENST00000406451 GPD1P21695 349 aa5.23□□□□□ -1.57
HDAC9-204ENST00000406451 MEI1Q5TIA1 1274 aa5.23□□□□□ -1.57
HDAC9-204ENST00000406451 ALS2CLQ60I27 953 aa5.23□□□□□ -1.57
HDAC9-204ENST00000406451 WNK4Q96J92 1243 aa5.23□□□□□ -1.57
HDAC9-204ENST00000406451 IL17RBQ9NRM6 502 aa5.23□□□□□ -1.57
HDAC9-204ENST00000406451 WDR91A4D1P6 747 aa5.23□□□□□ -1.57
HDAC9-204ENST00000406451 CASTOR2A6NHX0 329 aa5.23□□□□□ -1.57
HDAC9-204ENST00000406451 CFAP99D6REC4 459 aa5.23□□□□□ -1.57
HDAC9-204ENST00000406451 RNASEH1O60930 286 aaKnown RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms