RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 ME1P48163 572 aa6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 ACOT2P49753 483 aa6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 CASP5P51878 434 aa6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 WNT7BP56706 349 aa6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 ELAVL2Q12926 359 aaKnown RBP6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 ENOX2Q16206 610 aaKnown RBP6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 HERC4Q5GLZ8 1057 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 ATAT1Q5SQI0 421 aa6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 AXDND1Q5T1B0 1012 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 LILRA6Q6PI73 481 aa6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 ZNF720Q7Z2F6 126 aa6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 GPR149Q86SP6 731 aa6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 KREMEN2Q8NCW0 462 aa6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 GLIS3Q8NEA6 775 aa6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 ZSWIM2Q8NEG5 633 aa6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 ST13P5Q8NFI4 369 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 HPS3Q969F9 1004 aa6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 ZNF707Q96C28 371 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 FAM84AQ96KN4 292 aa6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 RIPOR3Q96MK2 946 aa6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 UROC1Q96N76 676 aa6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 NECTIN4Q96NY8 510 aa6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 CLSTN3Q9BQT9 956 aa6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 MSTO1Q9BUK6 570 aa6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 SMOC2Q9H3U7 446 aa6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 MRPL44Q9H9J2 332 aaKnown RBP6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 SLC38A7Q9NVC3 462 aa6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 FNIP2Q9P278 1114 aa6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 KCNG1Q9UIX4 513 aa6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 PCDHGC3Q9UN70 934 aa6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 PCDHA7Q9UN72 937 aa6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 ZDHHC9Q9Y397 364 aa6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 DOCK8Q8NF50 2099 aa6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 PIEZO1Q92508 2521 aa6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 ANK1P16157 1881 aa6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 CCL16O15467 120 aa6.27□□□□□ -1.41
HMGB1P20-201ENST00000402555 GPR37L1O60883 481 aa6.27□□□□□ -1.41
HMGB1P20-201ENST00000402555 CUTAO60888 179 aa6.27□□□□□ -1.41
HMGB1P20-201ENST00000402555 N4BP1O75113 896 aaKnown RBP6.27□□□□□ -1.41
HMGB1P20-201ENST00000402555 PRPF6O94906 941 aaKnown RBP6.27□□□□□ -1.41
HMGB1P20-201ENST00000402555 GCNT3O95395 438 aa6.27□□□□□ -1.41
HMGB1P20-201ENST00000402555 NFICP08651 508 aa6.27□□□□□ -1.41
HMGB1P20-201ENST00000402555 GAP43P17677 238 aa6.27□□□□□ -1.41
HMGB1P20-201ENST00000402555 ADSSP30520 456 aa6.27□□□□□ -1.41
HMGB1P20-201ENST00000402555 MCM4P33991 863 aa6.27□□□□□ -1.41
HMGB1P20-201ENST00000402555 OR1D2P34982 312 aa6.27□□□□□ -1.41
HMGB1P20-201ENST00000402555 ARPP19P56211 112 aa6.27□□□□□ -1.41
HMGB1P20-201ENST00000402555 NTHL1P78549 312 aa6.27□□□□□ -1.41
HMGB1P20-201ENST00000402555 SKOR1P84550 965 aa6.27□□□□□ -1.41
HMGB1P20-201ENST00000402555 PPP2R3AQ06190 1150 aa6.27□□□□□ -1.41
HMGB1P20-201ENST00000402555 ZBTB6Q15916 424 aa6.27□□□□□ -1.41
HMGB1P20-201ENST00000402555 ADALQ6DHV7 355 aa6.27□□□□□ -1.41
HMGB1P20-201ENST00000402555 JADE1Q6IE81 842 aa6.27□□□□□ -1.41
HMGB1P20-201ENST00000402555 CCDC149Q6ZUS6 474 aa6.27□□□□□ -1.41
HMGB1P20-201ENST00000402555 HFE2Q6ZVN8 426 aa6.27□□□□□ -1.41
HMGB1P20-201ENST00000402555 GPR65Q8IYL9 337 aa6.27□□□□□ -1.41
HMGB1P20-201ENST00000402555 GRAMD1CQ8IYS0 662 aa6.27□□□□□ -1.41
HMGB1P20-201ENST00000402555 TDRD5Q8NAT2 981 aaKnown RBP6.27□□□□□ -1.41
HMGB1P20-201ENST00000402555 CMASQ8NFW8 434 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P20-201ENST00000402555 NOC3LQ8WTT2 800 aaKnown RBP6.27□□□□□ -1.41
HMGB1P20-201ENST00000402555 SMG7Q92540 1137 aaKnown RBP6.27□□□□□ -1.41
HMGB1P20-201ENST00000402555 KCNN1Q92952 543 aa6.27□□□□□ -1.41
HMGB1P20-201ENST00000402555 STRA6Q9BX79 667 aa6.27□□□□□ -1.41
HMGB1P20-201ENST00000402555 BLZF1Q9H2G9 400 aa6.27□□□□□ -1.41
HMGB1P20-201ENST00000402555 ST6GALNAC4Q9H4F1 302 aa6.27□□□□□ -1.41
HMGB1P20-201ENST00000402555 RPF1Q9H9Y2 349 aaKnown RBP6.27□□□□□ -1.41
HMGB1P20-201ENST00000402555 PIDD1Q9HB75 910 aa6.27□□□□□ -1.41
HMGB1P20-201ENST00000402555 PANK4Q9NVE7 773 aa6.27□□□□□ -1.41
HMGB1P20-201ENST00000402555 MTRRQ9UBK8 725 aa6.27□□□□□ -1.41
HMGB1P20-201ENST00000402555 LIMD1Q9UGP4 676 aa6.27□□□□□ -1.41
HMGB1P20-201ENST00000402555 FBXW11Q9UKB1 542 aa6.27□□□□□ -1.41
HMGB1P20-201ENST00000402555 CPSF3Q9UKF6 684 aaKnown RBP6.27□□□□□ -1.41
HMGB1P20-201ENST00000402555 AGO2Q9UKV8 859 aaKnown RBP6.27□□□□□ -1.41
HMGB1P20-201ENST00000402555 NUB1Q9Y5A7 615 aa6.27□□□□□ -1.41
HMGB1P20-201ENST00000402555 TIMM13Q9Y5L4 95 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P20-201ENST00000402555 CDY1Q9Y6F8 540 aa6.27□□□□□ -1.41
HMGB1P20-201ENST00000402555 TCHHQ07283 1943 aa6.27□□□□□ -1.41
HMGB1P20-201ENST00000402555 SCN1AP35498 2009 aa6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 CLUHO75153 1309 aa6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 FRMD3A2A2Y4 597 aa6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 GOLGA8IPA6NC78 632 aa6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 GOLGA8JA6NMD2 632 aa6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 J3QL48 77 aa6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 SPTLC1O15269 473 aa6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 POLR2DO15514 142 aaKnown RBP6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 TRAPPC3O43617 180 aa6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 C8AP07357 584 aa6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 ADRB2P07550 413 aa6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 LRPAP1P30533 357 aa6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 GBP2P32456 591 aaPredicted RBP6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 RPL9P32969 192 aaKnown RBP6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 AFMP43652 599 aa6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 CDR1P51861 262 aa6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 ASIC1P78348 528 aa6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 ZXDAP98168 799 aa6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 ROR1Q01973 937 aa6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 CREMQ03060 361 aa6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 RAB33AQ14088 237 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms