RNA–Protein interactions for RNA: ENST00000394083.6

GAPVD1-204, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 4,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-204ENST00000394083 MSS51Q4VC12 460 aa9.06□□□□□ -0.96
GAPVD1-204ENST00000394083 DPF3Q92784 378 aa9.06□□□□□ -0.96
GAPVD1-204ENST00000394083 FDXACB1Q9BRP7 624 aaPredicted RBP9.06□□□□□ -0.96
GAPVD1-204ENST00000394083 LRRC27Q9C0I9 530 aa9.06□□□□□ -0.96
GAPVD1-204ENST00000394083 DPEP3Q9H4B8 488 aa9.06□□□□□ -0.96
GAPVD1-204ENST00000394083 SPON1Q9HCB6 807 aa9.06□□□□□ -0.96
GAPVD1-204ENST00000394083 MICAL3Q7RTP6 2002 aa9.06□□□□□ -0.96
GAPVD1-204ENST00000394083 PASKQ96RG2 1323 aa9.06□□□□□ -0.96
GAPVD1-204ENST00000394083 BANF1O75531 89 aa9.06□□□□□ -0.96
GAPVD1-204ENST00000394083 PSAPP07602 524 aa9.06□□□□□ -0.96
GAPVD1-204ENST00000394083 CGB2Q6NT52 195 aa9.06□□□□□ -0.96
GAPVD1-204ENST00000394083 C11orf63Q6NUN7 778 aa9.06□□□□□ -0.96
GAPVD1-204ENST00000394083 NLRX1Q86UT6 975 aa9.06□□□□□ -0.96
GAPVD1-204ENST00000394083 ZNF606Q8WXB4 792 aa9.06□□□□□ -0.96
GAPVD1-204ENST00000394083 NOX5Q96PH1 765 aa9.06□□□□□ -0.96
GAPVD1-204ENST00000394083 TMEM134Q9H6X4 195 aa9.06□□□□□ -0.96
GAPVD1-204ENST00000394083 GOLGA2P5Q9HBQ8 144 aa9.06□□□□□ -0.96
GAPVD1-204ENST00000394083 HAS3O00219 553 aa9.05□□□□□ -0.96
GAPVD1-204ENST00000394083 ERBB2P04626 1255 aa9.05□□□□□ -0.96
GAPVD1-204ENST00000394083 CLTAP09496 248 aa9.05□□□□□ -0.96
GAPVD1-204ENST00000394083 HSPA9P38646 679 aaKnown RBP9.05□□□□□ -0.96
GAPVD1-204ENST00000394083 TRAF7Q6Q0C0 670 aa9.05□□□□□ -0.96
GAPVD1-204ENST00000394083 PLPPR4Q7Z2D5 763 aa9.05□□□□□ -0.96
GAPVD1-204ENST00000394083 GPR142Q7Z601 462 aa9.05□□□□□ -0.96
GAPVD1-204ENST00000394083 ZBTB33Q86T24 672 aa9.05□□□□□ -0.96
GAPVD1-204ENST00000394083 BRSK2Q8IWQ3 736 aa9.05□□□□□ -0.96
GAPVD1-204ENST00000394083 KLHL7Q8IXQ5 586 aa9.05□□□□□ -0.96
GAPVD1-204ENST00000394083 DDX23Q9BUQ8 820 aaKnown RBP9.05□□□□□ -0.96
GAPVD1-204ENST00000394083 MIA3Q5JRA6 1907 aa9.05□□□□□ -0.96
GAPVD1-204ENST00000394083 MBLAC1A4D2B0 266 aaPredicted RBP9.05□□□□□ -0.96
GAPVD1-204ENST00000394083 MARCH6O60337 910 aa9.05□□□□□ -0.96
GAPVD1-204ENST00000394083 RNF40O75150 1001 aa9.05□□□□□ -0.96
GAPVD1-204ENST00000394083 SRGAP2CP0DJJ0 459 aa9.05□□□□□ -0.96
GAPVD1-204ENST00000394083 BRD2P25440 801 aaKnown RBP9.05□□□□□ -0.96
GAPVD1-204ENST00000394083 STAT1P42224 750 aa9.05□□□□□ -0.96
GAPVD1-204ENST00000394083 OSTNP61366 133 aa9.05□□□□□ -0.96
GAPVD1-204ENST00000394083 TMEM62Q0P6H9 643 aa9.05□□□□□ -0.96
GAPVD1-204ENST00000394083 USP50Q70EL3 339 aaPredicted RBP9.05□□□□□ -0.96
GAPVD1-204ENST00000394083 RNF149Q8NC42 400 aa9.05□□□□□ -0.96
GAPVD1-204ENST00000394083 LMBR1Q8WVP7 490 aa9.05□□□□□ -0.96
GAPVD1-204ENST00000394083 KIFAP3Q92845 792 aa9.05□□□□□ -0.96
GAPVD1-204ENST00000394083 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.05□□□□□ -0.963e-8■■■■□ 25.1
GAPVD1-204ENST00000394083 TMEM206Q9H813 350 aa9.05□□□□□ -0.96
GAPVD1-204ENST00000394083 CTNNAL1Q9UBT7 734 aa9.05□□□□□ -0.96
GAPVD1-204ENST00000394083 CXCL11O14625 94 aa9.05□□□□□ -0.96
GAPVD1-204ENST00000394083 CUL2Q13617 745 aa9.05□□□□□ -0.96
GAPVD1-204ENST00000394083 BNIPLQ7Z465 357 aa9.05□□□□□ -0.96
GAPVD1-204ENST00000394083 DAAM2Q86T65 1068 aa9.05□□□□□ -0.96
GAPVD1-204ENST00000394083 SEMA4AQ9H3S1 761 aa9.05□□□□□ -0.96
GAPVD1-204ENST00000394083 TUBGCP4Q9UGJ1 667 aa9.05□□□□□ -0.96
GAPVD1-204ENST00000394083 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.05□□□□□ -0.96
GAPVD1-204ENST00000394083 BMP1P13497 986 aa9.05□□□□□ -0.96
GAPVD1-204ENST00000394083 TKTP29401 623 aaKnown RBP9.05□□□□□ -0.96
GAPVD1-204ENST00000394083 ZNF394Q53GI3 561 aa9.05□□□□□ -0.96
GAPVD1-204ENST00000394083 CYP4A22Q5TCH4 519 aa9.05□□□□□ -0.96
GAPVD1-204ENST00000394083 FAM219BQ5XKK7 198 aa9.05□□□□□ -0.96
GAPVD1-204ENST00000394083 JADE1Q6IE81 842 aa9.05□□□□□ -0.96
GAPVD1-204ENST00000394083 ACAD10Q6JQN1 1059 aa9.05□□□□□ -0.96
GAPVD1-204ENST00000394083 P2RY11Q96G91 374 aa9.05□□□□□ -0.96
GAPVD1-204ENST00000394083 NUP85Q9BW27 656 aa9.05□□□□□ -0.96
GAPVD1-204ENST00000394083 C17orf75Q9HAS0 396 aa9.05□□□□□ -0.96
GAPVD1-204ENST00000394083 RBAKQ9NYW8 714 aaPredicted RBP9.05□□□□□ -0.96
GAPVD1-204ENST00000394083 NEU3Q9UQ49 428 aa9.05□□□□□ -0.96
GAPVD1-204ENST00000394083 LACTBL1A8MY62 500 aa9.04□□□□□ -0.96
GAPVD1-204ENST00000394083 P4HA2O15460 535 aa9.04□□□□□ -0.96
GAPVD1-204ENST00000394083 CCP110O43303 1012 aa9.04□□□□□ -0.96
GAPVD1-204ENST00000394083 HNRNPH2P55795 449 aaKnown RBP9.04□□□□□ -0.96
GAPVD1-204ENST00000394083 DMP1Q13316 513 aaPredicted RBP9.04□□□□□ -0.96
GAPVD1-204ENST00000394083 CCSAPQ6IQ19 270 aaPredicted RBP9.04□□□□□ -0.96
GAPVD1-204ENST00000394083 TTC30AQ86WT1 665 aa9.04□□□□□ -0.96
GAPVD1-204ENST00000394083 ARFGAP3Q9NP61 516 aa9.04□□□□□ -0.96
GAPVD1-204ENST00000394083 ZNHIT6Q9NWK9 470 aaKnown RBP9.04□□□□□ -0.96
GAPVD1-204ENST00000394083 RNF14Q9UBS8 474 aa9.04□□□□□ -0.96
GAPVD1-204ENST00000394083 TMEM191CA6NGB0 347 aa9.04□□□□□ -0.96
GAPVD1-204ENST00000394083 CLDN3O15551 220 aa9.04□□□□□ -0.96
GAPVD1-204ENST00000394083 MMP3P08254 477 aa9.04□□□□□ -0.96
GAPVD1-204ENST00000394083 TMEM191BP0C7N4 346 aa9.04□□□□□ -0.96
GAPVD1-204ENST00000394083 KRT10P13645 584 aa9.04□□□□□ -0.96
GAPVD1-204ENST00000394083 NOP14P78316 857 aaKnown RBP9.04□□□□□ -0.96
GAPVD1-204ENST00000394083 NETO2Q8NC67 525 aa9.04□□□□□ -0.96
GAPVD1-204ENST00000394083 CGRRF1Q99675 332 aa9.04□□□□□ -0.96
GAPVD1-204ENST00000394083 PTGESO14684 152 aa9.04□□□□□ -0.96
GAPVD1-204ENST00000394083 FSCN2O14926 492 aa9.04□□□□□ -0.96
GAPVD1-204ENST00000394083 ASAP2O43150 1006 aa9.04□□□□□ -0.96
GAPVD1-204ENST00000394083 FYNP06241 537 aa9.04□□□□□ -0.96
GAPVD1-204ENST00000394083 GZMAP12544 262 aa9.04□□□□□ -0.96
GAPVD1-204ENST00000394083 GPD2P43304 727 aa9.04□□□□□ -0.96
GAPVD1-204ENST00000394083 MNS1Q8NEH6 495 aa9.04□□□□□ -0.96
GAPVD1-204ENST00000394083 NDRG1Q92597 394 aaKnown RBP9.04□□□□□ -0.96
GAPVD1-204ENST00000394083 FAM212AQ96EL1 285 aa9.04□□□□□ -0.96
GAPVD1-204ENST00000394083 FAM204AQ9H8W3 233 aa9.04□□□□□ -0.96
GAPVD1-204ENST00000394083 VIPAS39Q9H9C1 493 aa9.04□□□□□ -0.96
GAPVD1-204ENST00000394083 MTMR10Q9NXD2 777 aa9.04□□□□□ -0.96
GAPVD1-204ENST00000394083 MGEA5O60502 916 aa9.03□□□□□ -0.96
GAPVD1-204ENST00000394083 STAM2O75886 525 aa9.03□□□□□ -0.96
GAPVD1-204ENST00000394083 FERP16591 822 aa9.03□□□□□ -0.96
GAPVD1-204ENST00000394083 LMO2P25791 158 aa9.03□□□□□ -0.96
GAPVD1-204ENST00000394083 RFC1P35251 1148 aaPredicted RBP9.03□□□□□ -0.96
GAPVD1-204ENST00000394083 SPRYD7Q5W111 196 aa9.03□□□□□ -0.96
GAPVD1-204ENST00000394083 RHPN2Q8IUC4 686 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms