RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 LRRC74AQ0VAA2 488 aa18.01■□□□□ 0.47
MCF2L-203ENST00000375604 NFIAQ12857 509 aa18.01■□□□□ 0.47
MCF2L-203ENST00000375604 LRRC37BQ96QE4 947 aa18.01■□□□□ 0.47
MCF2L-203ENST00000375604 KCNJ1P48048 391 aa18.01■□□□□ 0.47
MCF2L-203ENST00000375604 RCAN1P53805 252 aa18.01■□□□□ 0.47
MCF2L-203ENST00000375604 CAV1Q03135 178 aa18.01■□□□□ 0.47
MCF2L-203ENST00000375604 ENOSF1Q7L5Y1 443 aa18.01■□□□□ 0.47
MCF2L-203ENST00000375604 NUDT12Q9BQG2 462 aa18.01■□□□□ 0.47
MCF2L-203ENST00000375604 CETPP11597 493 aa18.01■□□□□ 0.47
MCF2L-203ENST00000375604 FBXO33Q7Z6M2 555 aa18.01■□□□□ 0.47
MCF2L-203ENST00000375604 ADSSL1Q8N142 457 aa18.01■□□□□ 0.47
MCF2L-203ENST00000375604 FAM71DQ8N9W8 422 aa18.01■□□□□ 0.47
MCF2L-203ENST00000375604 SPATA4Q8NEY3 305 aa18.01■□□□□ 0.47
MCF2L-203ENST00000375604 HPDLQ96IR7 371 aa18.01■□□□□ 0.47
MCF2L-203ENST00000375604 ZFYVE19Q96K21 471 aa18.01■□□□□ 0.47
MCF2L-203ENST00000375604 RRAGCQ9HB90 399 aa18.01■□□□□ 0.47
MCF2L-203ENST00000375604 SPATA31A5Q5VU36 1347 aa18.01■□□□□ 0.47
MCF2L-203ENST00000375604 SPATA31A7Q8IWB4 1347 aa18.01■□□□□ 0.47
MCF2L-203ENST00000375604 GMNCA6NCL1 334 aa18.01■□□□□ 0.47
MCF2L-203ENST00000375604 C9orf131Q5VYM1 1079 aa18.01■□□□□ 0.47
MCF2L-203ENST00000375604 PTPRN2Q92932 1015 aa18.01■□□□□ 0.47
MCF2L-203ENST00000375604 ADAM21Q9UKJ8 722 aa18.01■□□□□ 0.47
MCF2L-203ENST00000375604 PLEKP08567 350 aaPredicted RBP18.01■□□□□ 0.47
MCF2L-203ENST00000375604 AARSP49588 968 aaKnown RBP eCLIP18.01■□□□□ 0.47
MCF2L-203ENST00000375604 CLCN3P51790 818 aa18.01■□□□□ 0.47
MCF2L-203ENST00000375604 VSNL1P62760 191 aa18.01■□□□□ 0.47
MCF2L-203ENST00000375604 RAD51Q06609 339 aa18.01■□□□□ 0.47
MCF2L-203ENST00000375604 CCDC85BQ15834 202 aaPredicted RBP18.01■□□□□ 0.47
MCF2L-203ENST00000375604 SBK1Q52WX2 424 aa18.01■□□□□ 0.47
MCF2L-203ENST00000375604 ZRANB3Q5FWF4 1079 aa18.01■□□□□ 0.47
MCF2L-203ENST00000375604 DEFB128Q7Z7B8 93 aa18.01■□□□□ 0.47
MCF2L-203ENST00000375604 SMAD5Q99717 465 aaKnown RBP18.01■□□□□ 0.47
MCF2L-203ENST00000375604 CD274Q9NZQ7 290 aa18.01■□□□□ 0.47
MCF2L-203ENST00000375604 RNF103-CHMP3A0A140T963 221 aa18■□□□□ 0.47
MCF2L-203ENST00000375604 AGRPO00253 132 aa18■□□□□ 0.47
MCF2L-203ENST00000375604 ACTR2P61160 394 aa18■□□□□ 0.47
MCF2L-203ENST00000375604 USP10Q14694 798 aaKnown RBP18■□□□□ 0.47
MCF2L-203ENST00000375604 LSM7Q9UK45 103 aaKnown RBP18■□□□□ 0.47
MCF2L-203ENST00000375604 MSH4O15457 936 aa18■□□□□ 0.47
MCF2L-203ENST00000375604 ZFXP17010 805 aaPredicted RBP18■□□□□ 0.47
MCF2L-203ENST00000375604 AP3M2P53677 418 aa18■□□□□ 0.47
MCF2L-203ENST00000375604 CEP70Q8NHQ1 597 aa18■□□□□ 0.47
MCF2L-203ENST00000375604 TASP1Q9H6P5 420 aa18■□□□□ 0.47
MCF2L-203ENST00000375604 DPP3Q9NY33 737 aa18■□□□□ 0.47
MCF2L-203ENST00000375604 RFX7Q2KHR2 1363 aa18■□□□□ 0.47
MCF2L-203ENST00000375604 FDPSP14324 419 aaKnown RBP18■□□□□ 0.47
MCF2L-203ENST00000375604 COMTP21964 271 aa18■□□□□ 0.47
MCF2L-203ENST00000375604 GTF2H3Q13889 308 aa18■□□□□ 0.47
MCF2L-203ENST00000375604 DDX42Q86XP3 938 aaKnown RBP eCLIP18■□□□□ 0.47
MCF2L-203ENST00000375604 C1orf131Q8NDD1 294 aaKnown RBP18■□□□□ 0.47
MCF2L-203ENST00000375604 KAT2BQ92831 832 aa18■□□□□ 0.47
MCF2L-203ENST00000375604 ARHGAP10A1A4S6 786 aa18■□□□□ 0.47
MCF2L-203ENST00000375604 C3orf70A6NLC5 250 aaPredicted RBP18■□□□□ 0.47
MCF2L-203ENST00000375604 ENTPD3O75355 529 aa18■□□□□ 0.47
MCF2L-203ENST00000375604 WEE1P30291 646 aa18■□□□□ 0.47
MCF2L-203ENST00000375604 HMOX2P30519 316 aa18■□□□□ 0.47
MCF2L-203ENST00000375604 BTKQ06187 659 aa18■□□□□ 0.47
MCF2L-203ENST00000375604 KCNB1Q14721 858 aa18■□□□□ 0.47
MCF2L-203ENST00000375604 PDIA6Q15084 440 aa18■□□□□ 0.47
MCF2L-203ENST00000375604 NEUROG2Q9H2A3 272 aa18■□□□□ 0.47
MCF2L-203ENST00000375604 ARHGEF38Q9NXL2 777 aa18■□□□□ 0.47
MCF2L-203ENST00000375604 OCM2P0CE71 109 aa18■□□□□ 0.47
MCF2L-203ENST00000375604 OCMP0CE72 109 aaPredicted RBP18■□□□□ 0.47
MCF2L-203ENST00000375604 DNAJB2P25686 324 aa18■□□□□ 0.47
MCF2L-203ENST00000375604 ZC3H12BQ5HYM0 836 aaKnown RBP18■□□□□ 0.47
MCF2L-203ENST00000375604 EXOC4Q96A65 974 aa18■□□□□ 0.47
MCF2L-203ENST00000375604 TRABDQ9H4I3 376 aa18■□□□□ 0.47
MCF2L-203ENST00000375604 ERAP1Q9NZ08 941 aa18■□□□□ 0.47
MCF2L-203ENST00000375604 WDR3Q9UNX4 943 aaKnown RBP eCLIP18■□□□□ 0.47
MCF2L-203ENST00000375604 RGL2O15211 777 aa17.99■□□□□ 0.47
MCF2L-203ENST00000375604 ARP10275 920 aa17.99■□□□□ 0.47
MCF2L-203ENST00000375604 ORC2Q13416 577 aaPredicted RBP17.99■□□□□ 0.47
MCF2L-203ENST00000375604 SV2CQ496J9 727 aa17.99■□□□□ 0.47
MCF2L-203ENST00000375604 RNF19AQ9NV58 838 aa17.99■□□□□ 0.47
MCF2L-203ENST00000375604 MYO1DO94832 1006 aa17.99■□□□□ 0.47
MCF2L-203ENST00000375604 PBLDP30039 288 aaPredicted RBP17.99■□□□□ 0.47
MCF2L-203ENST00000375604 PLIN5Q00G26 463 aa17.99■□□□□ 0.47
MCF2L-203ENST00000375604 ASAP3Q8TDY4 903 aa17.99■□□□□ 0.47
MCF2L-203ENST00000375604 NT5C1AQ9BXI3 368 aa17.99■□□□□ 0.47
MCF2L-203ENST00000375604 TRIM54Q9BYV2 358 aa17.99■□□□□ 0.47
MCF2L-203ENST00000375604 SGPL1O95470 568 aa17.99■□□□□ 0.47
MCF2L-203ENST00000375604 CPT1AP50416 773 aa17.99■□□□□ 0.47
MCF2L-203ENST00000375604 ACTR5Q9H9F9 607 aaPredicted RBP17.99■□□□□ 0.47
MCF2L-203ENST00000375604 NCF1BA6NI72 391 aaPredicted RBP17.99■□□□□ 0.47
MCF2L-203ENST00000375604 NCF1CA8MVU1 366 aaPredicted RBP17.99■□□□□ 0.47
MCF2L-203ENST00000375604 EXTL3O43909 919 aa17.99■□□□□ 0.47
MCF2L-203ENST00000375604 NCF1P14598 390 aaPredicted RBP17.99■□□□□ 0.47
MCF2L-203ENST00000375604 HOXA7P31268 230 aaPredicted RBP17.99■□□□□ 0.47
MCF2L-203ENST00000375604 TAP1Q03518 808 aa17.99■□□□□ 0.47
MCF2L-203ENST00000375604 SLC15A2Q16348 729 aa17.99■□□□□ 0.47
MCF2L-203ENST00000375604 B4GALNT2Q8NHY0 566 aa17.99■□□□□ 0.47
MCF2L-203ENST00000375604 MED15Q96RN5 788 aa17.99■□□□□ 0.47
MCF2L-203ENST00000375604 MTMR12Q9C0I1 747 aa17.99■□□□□ 0.47
MCF2L-203ENST00000375604 PKP3Q9Y446 797 aa17.99■□□□□ 0.47
MCF2L-203ENST00000375604 PFASO15067 1338 aa17.99■□□□□ 0.47
MCF2L-203ENST00000375604 FAM47DPA6NHR8 397 aa17.99■□□□□ 0.47
MCF2L-203ENST00000375604 TMED8Q6PL24 325 aaPredicted RBP17.99■□□□□ 0.47
MCF2L-203ENST00000375604 ATP6V1G3Q96LB4 118 aa17.99■□□□□ 0.47
MCF2L-203ENST00000375604 RBM12Q9NTZ6 932 aaKnown RBP17.99■□□□□ 0.47
MCF2L-203ENST00000375604 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms