RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 MXD4Q14582 209 aaPredicted RBP12.31□□□□□ -0.44
COPA-202ENST00000368069 PRAMEF18Q5VWM3 479 aa12.31□□□□□ -0.44
COPA-202ENST00000368069 ARHGEF26Q96DR7 871 aa12.31□□□□□ -0.44
COPA-202ENST00000368069 FAM193BQ96PV7 902 aaPredicted RBP12.31□□□□□ -0.44
COPA-202ENST00000368069 TSSK1BQ9BXA7 367 aa12.31□□□□□ -0.44
COPA-202ENST00000368069 SEMA4AQ9H3S1 761 aa12.31□□□□□ -0.44
COPA-202ENST00000368069 UBN1Q9NPG3 1134 aa12.31□□□□□ -0.44
COPA-202ENST00000368069 CASZ1Q86V15 1759 aa12.3□□□□□ -0.44
COPA-202ENST00000368069 IGF2BP3O00425 579 aaKnown RBP eCLIP12.3□□□□□ -0.443e-9■■■■■ 27.8
COPA-202ENST00000368069 DIAPH2O60879 1101 aa12.3□□□□□ -0.44
COPA-202ENST00000368069 OATP04181 439 aa12.3□□□□□ -0.44
COPA-202ENST00000368069 APRTP07741 180 aa12.3□□□□□ -0.44
COPA-202ENST00000368069 MYBPC2Q14324 1141 aa12.3□□□□□ -0.44
COPA-202ENST00000368069 TTMPQ5BVD1 217 aa12.3□□□□□ -0.44
COPA-202ENST00000368069 JADE1Q6IE81 842 aa12.3□□□□□ -0.44
COPA-202ENST00000368069 CYB5D1Q6P9G0 228 aa12.3□□□□□ -0.44
COPA-202ENST00000368069 C3orf62Q6ZUJ4 267 aa12.3□□□□□ -0.44
COPA-202ENST00000368069 RFX8Q6ZV50 586 aa12.3□□□□□ -0.44
COPA-202ENST00000368069 RIBC1Q8N443 379 aaPredicted RBP12.3□□□□□ -0.44
COPA-202ENST00000368069 PSTPIP1O43586 416 aa12.3□□□□□ -0.44
COPA-202ENST00000368069 EN1Q05925 392 aaPredicted RBP12.3□□□□□ -0.44
COPA-202ENST00000368069 PLCB4Q15147 1175 aa12.3□□□□□ -0.44
COPA-202ENST00000368069 SERPINI1Q99574 410 aa12.3□□□□□ -0.44
COPA-202ENST00000368069 CD248Q9HCU0 757 aa12.3□□□□□ -0.44
COPA-202ENST00000368069 KCNMB3Q9NPA1 279 aa12.3□□□□□ -0.44
COPA-202ENST00000368069 MYOZ2Q9NPC6 264 aa12.3□□□□□ -0.44
COPA-202ENST00000368069 CNOT7Q9UIV1 285 aaKnown RBP12.3□□□□□ -0.44
COPA-202ENST00000368069 RGPD8O14715 1765 aaPredicted RBP12.3□□□□□ -0.44
COPA-202ENST00000368069 SPDYE2BA6NHP3 402 aa12.3□□□□□ -0.44
COPA-202ENST00000368069 GRAP2O75791 330 aa12.3□□□□□ -0.44
COPA-202ENST00000368069 SPDYE6P0CI01 402 aa12.3□□□□□ -0.44
COPA-202ENST00000368069 SH3BGRP55822 239 aaPredicted RBP12.3□□□□□ -0.44
COPA-202ENST00000368069 COPS2P61201 443 aa12.3□□□□□ -0.44
COPA-202ENST00000368069 DNAJC3Q13217 504 aa12.3□□□□□ -0.44
COPA-202ENST00000368069 CBWD6Q4V339 395 aa12.3□□□□□ -0.44
COPA-202ENST00000368069 CBWD3Q5JTY5 395 aa12.3□□□□□ -0.44
COPA-202ENST00000368069 CBWD5Q5RIA9 395 aa12.3□□□□□ -0.44
COPA-202ENST00000368069 LONP2Q86WA8 852 aa12.3□□□□□ -0.44
COPA-202ENST00000368069 LRRC71Q8N4P6 559 aa12.3□□□□□ -0.44
COPA-202ENST00000368069 WHRNQ9P202 907 aa12.3□□□□□ -0.44
COPA-202ENST00000368069 PNMA3Q9UL41 463 aa12.3□□□□□ -0.44
COPA-202ENST00000368069 FRMPD4Q14CM0 1322 aa12.3□□□□□ -0.44
COPA-202ENST00000368069 ASAP2O43150 1006 aa12.29□□□□□ -0.44
COPA-202ENST00000368069 TXNP10599 105 aaKnown RBP12.29□□□□□ -0.44
COPA-202ENST00000368069 HNRNPH3P31942 346 aaKnown RBP12.29□□□□□ -0.44
COPA-202ENST00000368069 LVRNQ6Q4G3 990 aa12.29□□□□□ -0.44
COPA-202ENST00000368069 RAB44Q7Z6P3 723 aaPredicted RBP12.29□□□□□ -0.44
COPA-202ENST00000368069 SPATA18Q8TC71 538 aa12.29□□□□□ -0.44
COPA-202ENST00000368069 GCOM2Q9BZD3 368 aaPredicted RBP12.29□□□□□ -0.44
COPA-202ENST00000368069 GANQ9H2C0 597 aa12.29□□□□□ -0.44
COPA-202ENST00000368069 ZC3H7BQ9UGR2 993 aaKnown RBP12.29□□□□□ -0.44
COPA-202ENST00000368069 C19orf81C9J6K1 198 aa12.29□□□□□ -0.44
COPA-202ENST00000368069 RBP3P10745 1247 aa12.29□□□□□ -0.44
COPA-202ENST00000368069 SCTRP47872 440 aa12.29□□□□□ -0.44
COPA-202ENST00000368069 ZNF200P98182 395 aaPredicted RBP12.29□□□□□ -0.44
COPA-202ENST00000368069 AP1ARQ63HQ0 302 aa12.29□□□□□ -0.44
COPA-202ENST00000368069 BTNL9Q6UXG8 535 aa12.29□□□□□ -0.44
COPA-202ENST00000368069 SV2AQ7L0J3 742 aa12.29□□□□□ -0.44
COPA-202ENST00000368069 AGGF1Q8N302 714 aaeCLIP12.29□□□□□ -0.444e-6■□□□□ 11.2
COPA-202ENST00000368069 SLC10A4Q96EP9 437 aa12.29□□□□□ -0.44
COPA-202ENST00000368069 TTC1Q99614 292 aa12.29□□□□□ -0.44
COPA-202ENST00000368069 PPCSQ9HAB8 311 aa12.29□□□□□ -0.44
COPA-202ENST00000368069 AGO4Q9HCK5 861 aaKnown RBP12.29□□□□□ -0.44
COPA-202ENST00000368069 STAP1Q9ULZ2 295 aa12.29□□□□□ -0.44
COPA-202ENST00000368069 KPNA7A9QM74 516 aa12.29□□□□□ -0.44
COPA-202ENST00000368069 KRT10P13645 584 aa12.29□□□□□ -0.44
COPA-202ENST00000368069 LCP1P13796 627 aa12.29□□□□□ -0.44
COPA-202ENST00000368069 CYP24A1Q07973 514 aa12.29□□□□□ -0.44
COPA-202ENST00000368069 PTK7Q13308 1070 aa12.29□□□□□ -0.44
COPA-202ENST00000368069 FSCBQ5H9T9 825 aa12.29□□□□□ -0.44
COPA-202ENST00000368069 RASSF3Q86WH2 238 aa12.29□□□□□ -0.44
COPA-202ENST00000368069 TMC2Q8TDI7 906 aa12.29□□□□□ -0.44
COPA-202ENST00000368069 SLC5A5Q92911 643 aa12.29□□□□□ -0.44
COPA-202ENST00000368069 ALKBH8Q96BT7 664 aaKnown RBP12.29□□□□□ -0.44
COPA-202ENST00000368069 ACAP3Q96P50 834 aa12.29□□□□□ -0.44
COPA-202ENST00000368069 WWP1Q9H0M0 922 aa12.29□□□□□ -0.44
COPA-202ENST00000368069 FAM96AQ9H5X1 160 aa12.29□□□□□ -0.44
COPA-202ENST00000368069 TRPA1O75762 1119 aa12.29□□□□□ -0.44
COPA-202ENST00000368069 TYK2P29597 1187 aa12.29□□□□□ -0.44
COPA-202ENST00000368069 RARRES1P49788 294 aa12.29□□□□□ -0.44
COPA-202ENST00000368069 SESN2P58004 480 aaPredicted RBP12.29□□□□□ -0.44
COPA-202ENST00000368069 COG7P83436 770 aa12.29□□□□□ -0.44
COPA-202ENST00000368069 ELMO3Q96BJ8 720 aa12.29□□□□□ -0.44
COPA-202ENST00000368069 OSBPL1AQ9BXW6 950 aa12.29□□□□□ -0.44
COPA-202ENST00000368069 YIPF3Q9GZM5 350 aa12.29□□□□□ -0.44
COPA-202ENST00000368069 SLC4A1P02730 911 aa12.28□□□□□ -0.44
COPA-202ENST00000368069 ZFXP17010 805 aaPredicted RBP12.28□□□□□ -0.44
COPA-202ENST00000368069 PRKCIP41743 596 aa12.28□□□□□ -0.44
COPA-202ENST00000368069 ERFP50548 548 aa12.28□□□□□ -0.44
COPA-202ENST00000368069 SOX10P56693 466 aa12.28□□□□□ -0.44
COPA-202ENST00000368069 SKOR1P84550 965 aa12.28□□□□□ -0.44
COPA-202ENST00000368069 NME3Q13232 169 aa12.28□□□□□ -0.44
COPA-202ENST00000368069 LBHD1Q9BQE6 289 aaPredicted RBP12.28□□□□□ -0.44
COPA-202ENST00000368069 CCDC22O60826 627 aa12.28□□□□□ -0.44
COPA-202ENST00000368069 GARTP22102 1010 aa12.28□□□□□ -0.44
COPA-202ENST00000368069 PGM1P36871 562 aa12.28□□□□□ -0.44
COPA-202ENST00000368069 ANKRD20A4Q4UJ75 823 aa12.28□□□□□ -0.44
COPA-202ENST00000368069 ANKRD20A8PQ5CZ79 823 aa12.28□□□□□ -0.44
COPA-202ENST00000368069 ANKRD20A2Q5SQ80 823 aa12.28□□□□□ -0.44
COPA-202ENST00000368069 ANKRD20A1Q5TYW2 823 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms