RNA–Protein interactions for RNA: ENST00000347968.7

MBD1-204, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-204ENST00000347968 AMIGO3Q86WK7 504 aa17.14■□□□□ 0.33
MBD1-204ENST00000347968 SLC7A8Q9UHI5 535 aa17.14■□□□□ 0.33
MBD1-204ENST00000347968 SMCO2A6NFE2 343 aa17.13■□□□□ 0.33
MBD1-204ENST00000347968 BANF1O75531 89 aa17.13■□□□□ 0.33
MBD1-204ENST00000347968 STAMBPO95630 424 aa17.13■□□□□ 0.33
MBD1-204ENST00000347968 TMEM253P0C7T8 217 aa17.13■□□□□ 0.33
MBD1-204ENST00000347968 TNFAIP3P21580 790 aa17.13■□□□□ 0.33
MBD1-204ENST00000347968 AP2B1P63010 937 aa17.13■□□□□ 0.33
MBD1-204ENST00000347968 PHEXP78562 749 aa17.13■□□□□ 0.33
MBD1-204ENST00000347968 PUM3Q15397 648 aaKnown RBP17.13■□□□□ 0.33
MBD1-204ENST00000347968 MYLK3Q32MK0 819 aa17.13■□□□□ 0.33
MBD1-204ENST00000347968 GRAMD1BQ3KR37 738 aa17.13■□□□□ 0.33
MBD1-204ENST00000347968 NLRX1Q86UT6 975 aa17.13■□□□□ 0.33
MBD1-204ENST00000347968 POU5F2Q8N7G0 328 aa17.13■□□□□ 0.33
MBD1-204ENST00000347968 MAK16Q9BXY0 300 aaKnown RBP17.13■□□□□ 0.33
MBD1-204ENST00000347968 IL1RAPL1Q9NZN1 696 aa17.13■□□□□ 0.33
MBD1-204ENST00000347968 SRP68Q9UHB9 627 aaKnown RBP17.13■□□□□ 0.33
MBD1-204ENST00000347968 ZNF148Q9UQR1 794 aa17.13■□□□□ 0.33
MBD1-204ENST00000347968 FCHO1O14526 889 aa17.13■□□□□ 0.33
MBD1-204ENST00000347968 BUD23O43709 281 aaKnown RBP17.13■□□□□ 0.33
MBD1-204ENST00000347968 TFAP2AP05549 437 aa17.13■□□□□ 0.33
MBD1-204ENST00000347968 HALP42357 657 aa17.13■□□□□ 0.33
MBD1-204ENST00000347968 PLCB3Q01970 1234 aa17.13■□□□□ 0.33
MBD1-204ENST00000347968 PNMA1Q8ND90 353 aa17.13■□□□□ 0.33
MBD1-204ENST00000347968 SLC26A7Q8TE54 656 aa17.13■□□□□ 0.33
MBD1-204ENST00000347968 HEMGNQ9BXL5 484 aa17.13■□□□□ 0.33
MBD1-204ENST00000347968 ANKFY1Q9P2R3 1169 aa17.13■□□□□ 0.33
MBD1-204ENST00000347968 ZMYM2Q9UBW7 1377 aa17.13■□□□□ 0.33
MBD1-204ENST00000347968 BAZ2AQ9UIF9 1905 aaKnown RBP17.13■□□□□ 0.33
MBD1-204ENST00000347968 RBMX2Q9Y388 322 aaKnown RBP17.13■□□□□ 0.33
MBD1-204ENST00000347968 A0A1B0GTW7 788 aa17.12■□□□□ 0.33
MBD1-204ENST00000347968 USP17L3A6NCW0 530 aa17.12■□□□□ 0.33
MBD1-204ENST00000347968 USP17L4A6NCW7 530 aa17.12■□□□□ 0.33
MBD1-204ENST00000347968 MAGEB2O15479 319 aa17.12■□□□□ 0.33
MBD1-204ENST00000347968 SMIM18P0DKX4 95 aa17.12■□□□□ 0.33
MBD1-204ENST00000347968 PLS3P13797 630 aa17.12■□□□□ 0.33
MBD1-204ENST00000347968 NPEPPSP55786 919 aa17.12■□□□□ 0.33
MBD1-204ENST00000347968 PPIDQ08752 370 aaKnown RBP17.12■□□□□ 0.33
MBD1-204ENST00000347968 KCNA1Q09470 495 aa17.12■□□□□ 0.33
MBD1-204ENST00000347968 ASPHQ12797 758 aa17.12■□□□□ 0.33
MBD1-204ENST00000347968 PDE1CQ14123 709 aaPredicted RBP17.12■□□□□ 0.33
MBD1-204ENST00000347968 SEPT7Q16181 437 aaKnown RBP17.12■□□□□ 0.33
MBD1-204ENST00000347968 LMBRD2Q68DH5 695 aaPredicted RBP17.12■□□□□ 0.33
MBD1-204ENST00000347968 USP17L1Q7RTZ2 530 aa17.12■□□□□ 0.33
MBD1-204ENST00000347968 ZBTB46Q86UZ6 589 aa17.12■□□□□ 0.33
MBD1-204ENST00000347968 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.12■□□□□ 0.33
MBD1-204ENST00000347968 LZICQ8WZA0 190 aa17.12■□□□□ 0.33
MBD1-204ENST00000347968 MTBPQ96DY7 904 aa17.12■□□□□ 0.33
MBD1-204ENST00000347968 SHCBP1LQ9BZQ2 653 aa17.12■□□□□ 0.33
MBD1-204ENST00000347968 RANBP17Q9H2T7 1088 aaKnown RBP17.12■□□□□ 0.33
MBD1-204ENST00000347968 CYLDQ9NQC7 956 aa17.12■□□□□ 0.33
MBD1-204ENST00000347968 ARHGEF4Q9NR80 690 aa17.12■□□□□ 0.33
MBD1-204ENST00000347968 MTUS1Q9ULD2 1270 aa17.12■□□□□ 0.33
MBD1-204ENST00000347968 FAM237BA0A1B0GVD1 139 aa17.12■□□□□ 0.33
MBD1-204ENST00000347968 HTR3EA5X5Y0 456 aa17.12■□□□□ 0.33
MBD1-204ENST00000347968 ARHGAP42A6NI28 874 aa17.12■□□□□ 0.33
MBD1-204ENST00000347968 TTLL13PA6NNM8 815 aa17.12■□□□□ 0.33
MBD1-204ENST00000347968 H3BSA7 217 aa17.12■□□□□ 0.33
MBD1-204ENST00000347968 ATP9BO43861 1147 aa17.12■□□□□ 0.33
MBD1-204ENST00000347968 CLPTM1O96005 669 aa17.12■□□□□ 0.33
MBD1-204ENST00000347968 RARBP10826 455 aa17.12■□□□□ 0.33
MBD1-204ENST00000347968 ZFXP17010 805 aaPredicted RBP17.12■□□□□ 0.33
MBD1-204ENST00000347968 KRT4P19013 534 aa17.12■□□□□ 0.33
MBD1-204ENST00000347968 SLC5A2P31639 672 aa17.12■□□□□ 0.33
MBD1-204ENST00000347968 SERPINB8P50452 374 aa17.12■□□□□ 0.33
MBD1-204ENST00000347968 TBL3Q12788 808 aaKnown RBP17.12■□□□□ 0.33
MBD1-204ENST00000347968 EPHA7Q15375 998 aa17.12■□□□□ 0.33
MBD1-204ENST00000347968 SIX1Q15475 284 aaPredicted RBP17.12■□□□□ 0.33
MBD1-204ENST00000347968 KRT79Q5XKE5 535 aa17.12■□□□□ 0.33
MBD1-204ENST00000347968 CYFIP1Q7L576 1253 aa17.12■□□□□ 0.33
MBD1-204ENST00000347968 ARHGEF1Q92888 912 aaKnown RBP17.12■□□□□ 0.33
MBD1-204ENST00000347968 CEP63Q96MT8 703 aa17.12■□□□□ 0.33
MBD1-204ENST00000347968 HERPUD2Q9BSE4 406 aa17.12■□□□□ 0.33
MBD1-204ENST00000347968 KCTD10Q9H3F6 313 aa17.12■□□□□ 0.33
MBD1-204ENST00000347968 SLC17A7Q9P2U7 560 aa17.12■□□□□ 0.33
MBD1-204ENST00000347968 ADAMTS6Q9UKP5 1117 aa17.12■□□□□ 0.33
MBD1-204ENST00000347968 JAG2Q9Y219 1238 aa17.12■□□□□ 0.33
MBD1-204ENST00000347968 GOLGB1Q14789 3259 aaKnown RBP17.12■□□□□ 0.33
MBD1-204ENST00000347968 CIB2O75838 187 aa17.12■□□□□ 0.33
MBD1-204ENST00000347968 GCAP28676 217 aa17.12■□□□□ 0.33
MBD1-204ENST00000347968 EPHB1P54762 984 aa17.12■□□□□ 0.33
MBD1-204ENST00000347968 TRIP10Q15642 601 aa17.12■□□□□ 0.33
MBD1-204ENST00000347968 RHBDF2Q6PJF5 856 aa17.12■□□□□ 0.33
MBD1-204ENST00000347968 ARHGAP27Q6ZUM4 889 aa17.12■□□□□ 0.33
MBD1-204ENST00000347968 PDSS2Q86YH6 399 aa17.12■□□□□ 0.33
MBD1-204ENST00000347968 ULK2Q8IYT8 1036 aa17.12■□□□□ 0.33
MBD1-204ENST00000347968 RNF169Q8NCN4 708 aa17.12■□□□□ 0.33
MBD1-204ENST00000347968 SLC5A5Q92911 643 aa17.12■□□□□ 0.33
MBD1-204ENST00000347968 PRICKLE1Q96MT3 831 aaPredicted RBP17.12■□□□□ 0.33
MBD1-204ENST00000347968 RBM15Q96T37 977 aaKnown RBP eCLIP17.12■□□□□ 0.33
MBD1-204ENST00000347968 VPS37BQ9H9H4 285 aa17.12■□□□□ 0.33
MBD1-204ENST00000347968 STX8Q9UNK0 236 aa17.12■□□□□ 0.33
MBD1-204ENST00000347968 NEU2Q9Y3R4 380 aa17.12■□□□□ 0.33
MBD1-204ENST00000347968 SMIM31A0A1B0GVY4 71 aa17.11■□□□□ 0.33
MBD1-204ENST00000347968 KLRF2D3W0D1 207 aa17.11■□□□□ 0.33
MBD1-204ENST00000347968 MARCH6O60337 910 aa17.11■□□□□ 0.33
MBD1-204ENST00000347968 FTLP02792 175 aaPredicted RBP17.11■□□□□ 0.33
MBD1-204ENST00000347968 GSTT2P0CG29 244 aa17.11■□□□□ 0.33
MBD1-204ENST00000347968 GSTT2BP0CG30 244 aa17.11■□□□□ 0.33
MBD1-204ENST00000347968 MYL2P10916 166 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms