RNA–Protein interactions for RNA: ENST00000341627.5

TNFRSF12A-202, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF12A, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-202ENST00000341627 MORC3Q14149 939 aa16.65■□□□□ 0.26
TNFRSF12A-202ENST00000341627 PSMD5Q16401 504 aa16.65■□□□□ 0.26
TNFRSF12A-202ENST00000341627 ZCWPW2Q504Y3 356 aa16.65■□□□□ 0.26
TNFRSF12A-202ENST00000341627 ANKRD54Q6NXT1 300 aa16.65■□□□□ 0.26
TNFRSF12A-202ENST00000341627 LLGL2Q6P1M3 1020 aa16.65■□□□□ 0.26
TNFRSF12A-202ENST00000341627 SYCE2Q6PIF2 218 aa16.65■□□□□ 0.26
TNFRSF12A-202ENST00000341627 PRSS55Q6UWB4 352 aaPredicted RBP16.65■□□□□ 0.26
TNFRSF12A-202ENST00000341627 DSTYKQ6XUX3 929 aa16.65■□□□□ 0.26
TNFRSF12A-202ENST00000341627 ANKS3Q6ZW76 656 aa16.65■□□□□ 0.26
TNFRSF12A-202ENST00000341627 USP37Q86T82 979 aa16.65■□□□□ 0.26
TNFRSF12A-202ENST00000341627 ADHFE1Q8IWW8 467 aa16.65■□□□□ 0.26
TNFRSF12A-202ENST00000341627 DHTKD1Q96HY7 919 aaPredicted RBP16.65■□□□□ 0.26
TNFRSF12A-202ENST00000341627 ZNF560Q96MR9 790 aa16.65■□□□□ 0.26
TNFRSF12A-202ENST00000341627 CGRRF1Q99675 332 aa16.65■□□□□ 0.26
TNFRSF12A-202ENST00000341627 MTMR12Q9C0I1 747 aa16.65■□□□□ 0.26
TNFRSF12A-202ENST00000341627 NUP62CLQ9H1M0 184 aa16.65■□□□□ 0.26
TNFRSF12A-202ENST00000341627 ITGA11Q9UKX5 1188 aa16.65■□□□□ 0.26
TNFRSF12A-202ENST00000341627 PCDHB8Q9UN66 801 aa16.65■□□□□ 0.26
TNFRSF12A-202ENST00000341627 HCFC2Q9Y5Z7 792 aa16.65■□□□□ 0.26
TNFRSF12A-202ENST00000341627 MAPK13O15264 365 aa16.64■□□□□ 0.25
TNFRSF12A-202ENST00000341627 ITGB3P05106 788 aa16.64■□□□□ 0.25
TNFRSF12A-202ENST00000341627 AARSP49588 968 aaKnown RBP eCLIP16.64■□□□□ 0.25
TNFRSF12A-202ENST00000341627 TAF6P49848 677 aa16.64■□□□□ 0.25
TNFRSF12A-202ENST00000341627 LILRA4P59901 499 aa16.64■□□□□ 0.25
TNFRSF12A-202ENST00000341627 RBP5P82980 135 aa16.64■□□□□ 0.25
TNFRSF12A-202ENST00000341627 LRRC63Q05C16 580 aa16.64■□□□□ 0.25
TNFRSF12A-202ENST00000341627 ADAM9Q13443 819 aa16.64■□□□□ 0.25
TNFRSF12A-202ENST00000341627 SV2CQ496J9 727 aa16.64■□□□□ 0.25
TNFRSF12A-202ENST00000341627 CENPPQ6IPU0 288 aa16.64■□□□□ 0.25
TNFRSF12A-202ENST00000341627 ELMSAN1Q6PJG2 1045 aa16.64■□□□□ 0.25
TNFRSF12A-202ENST00000341627 TMEM130Q8N3G9 435 aa16.64■□□□□ 0.25
TNFRSF12A-202ENST00000341627 CSGALNACT2Q8N6G5 542 aa16.64■□□□□ 0.25
TNFRSF12A-202ENST00000341627 C1orf127Q8N9H9 656 aa16.64■□□□□ 0.25
TNFRSF12A-202ENST00000341627 LNX1Q8TBB1 728 aaPredicted RBP16.64■□□□□ 0.25
TNFRSF12A-202ENST00000341627 SUSD6Q92537 303 aa16.64■□□□□ 0.25
TNFRSF12A-202ENST00000341627 DPP7Q9UHL4 492 aa16.64■□□□□ 0.25
TNFRSF12A-202ENST00000341627 USP15Q9Y4E8 981 aaPredicted RBP16.64■□□□□ 0.25
TNFRSF12A-202ENST00000341627 H7C4K7 107 aa16.63■□□□□ 0.25
TNFRSF12A-202ENST00000341627 M0QZQ0 153 aa16.63■□□□□ 0.25
TNFRSF12A-202ENST00000341627 PPEF2O14830 753 aa16.63■□□□□ 0.25
TNFRSF12A-202ENST00000341627 CETN3O15182 167 aa16.63■□□□□ 0.25
TNFRSF12A-202ENST00000341627 MBD3O95983 291 aa16.63■□□□□ 0.25
TNFRSF12A-202ENST00000341627 GLUD1P00367 558 aa16.63■□□□□ 0.25
TNFRSF12A-202ENST00000341627 C1RP00736 705 aa16.63■□□□□ 0.25
TNFRSF12A-202ENST00000341627 KRT19P08727 400 aa16.63■□□□□ 0.25
TNFRSF12A-202ENST00000341627 POLR2BP30876 1174 aaKnown RBP16.63■□□□□ 0.25
TNFRSF12A-202ENST00000341627 PSMC2P35998 433 aaKnown RBP16.63■□□□□ 0.25
TNFRSF12A-202ENST00000341627 CASP4P49662 377 aa16.63■□□□□ 0.25
TNFRSF12A-202ENST00000341627 AP3M2P53677 418 aa16.63■□□□□ 0.25
TNFRSF12A-202ENST00000341627 VARS2Q5ST30 1063 aaKnown RBP16.63■□□□□ 0.25
TNFRSF12A-202ENST00000341627 LMBRD2Q68DH5 695 aaPredicted RBP16.63■□□□□ 0.25
TNFRSF12A-202ENST00000341627 LRRC52Q8N7C0 313 aa16.63■□□□□ 0.25
TNFRSF12A-202ENST00000341627 OR5B17Q8NGF7 314 aa16.63■□□□□ 0.25
TNFRSF12A-202ENST00000341627 SLC22A17Q8WUG5 538 aa16.63■□□□□ 0.25
TNFRSF12A-202ENST00000341627 EPHX3Q9H6B9 360 aa16.63■□□□□ 0.25
TNFRSF12A-202ENST00000341627 DZANK1Q9NVP4 752 aa16.63■□□□□ 0.25
TNFRSF12A-202ENST00000341627 MTRRQ9UBK8 725 aa16.63■□□□□ 0.25
TNFRSF12A-202ENST00000341627 AGAP1Q9UPQ3 857 aa16.63■□□□□ 0.25
TNFRSF12A-202ENST00000341627 BACE2Q9Y5Z0 518 aa16.63■□□□□ 0.25
TNFRSF12A-202ENST00000341627 BICDL2A1A5D9 508 aa16.62■□□□□ 0.25
TNFRSF12A-202ENST00000341627 ODC1P11926 461 aa16.62■□□□□ 0.25
TNFRSF12A-202ENST00000341627 KRT13P13646 458 aa16.62■□□□□ 0.25
TNFRSF12A-202ENST00000341627 HOXB8P17481 243 aaPredicted RBP16.62■□□□□ 0.25
TNFRSF12A-202ENST00000341627 RPL17P18621 184 aaKnown RBP16.62■□□□□ 0.25
TNFRSF12A-202ENST00000341627 CCNE1P24864 410 aa16.62■□□□□ 0.25
TNFRSF12A-202ENST00000341627 SSTR3P32745 418 aaPredicted RBP16.62■□□□□ 0.25
TNFRSF12A-202ENST00000341627 CLCN4P51793 760 aa16.62■□□□□ 0.25
TNFRSF12A-202ENST00000341627 FKBP3Q00688 224 aaKnown RBP16.62■□□□□ 0.25
TNFRSF12A-202ENST00000341627 YWHAHQ04917 246 aaPredicted RBP16.62■□□□□ 0.25
TNFRSF12A-202ENST00000341627 ZNF280DQ6N043 979 aa16.62■□□□□ 0.25
TNFRSF12A-202ENST00000341627 INTS8Q75QN2 995 aaKnown RBP16.62■□□□□ 0.25
TNFRSF12A-202ENST00000341627 FAM186BQ8IYM0 893 aa16.62■□□□□ 0.25
TNFRSF12A-202ENST00000341627 TMC2Q8TDI7 906 aa16.62■□□□□ 0.25
TNFRSF12A-202ENST00000341627 PARD3BQ8TEW8 1205 aa16.62■□□□□ 0.25
TNFRSF12A-202ENST00000341627 SENP8Q96LD8 212 aa16.62■□□□□ 0.25
TNFRSF12A-202ENST00000341627 POP1Q99575 1024 aaKnown RBP16.62■□□□□ 0.25
TNFRSF12A-202ENST00000341627 MKNK1Q9BUB5 465 aa16.62■□□□□ 0.25
TNFRSF12A-202ENST00000341627 DSEQ9UL01 958 aa16.62■□□□□ 0.25
TNFRSF12A-202ENST00000341627 PTPRJQ12913 1337 aa16.62■□□□□ 0.25
TNFRSF12A-202ENST00000341627 SPDYE4A6NLX3 237 aa16.61■□□□□ 0.25
TNFRSF12A-202ENST00000341627 KPNA7A9QM74 516 aa16.61■□□□□ 0.25
TNFRSF12A-202ENST00000341627 SPTLC1O15269 473 aa16.61■□□□□ 0.25
TNFRSF12A-202ENST00000341627 AKAP3O75969 853 aa16.61■□□□□ 0.25
TNFRSF12A-202ENST00000341627 EPB41P11171 864 aaKnown RBP16.61■□□□□ 0.25
TNFRSF12A-202ENST00000341627 EPCAMP16422 314 aa16.61■□□□□ 0.25
TNFRSF12A-202ENST00000341627 TYMPP19971 482 aa16.61■□□□□ 0.25
TNFRSF12A-202ENST00000341627 BMP6P22004 513 aa16.61■□□□□ 0.25
TNFRSF12A-202ENST00000341627 ENPEPQ07075 957 aa16.61■□□□□ 0.25
TNFRSF12A-202ENST00000341627 MYO1EQ12965 1108 aa16.61■□□□□ 0.25
TNFRSF12A-202ENST00000341627 CTXN3Q4LDR2 81 aa16.61■□□□□ 0.25
TNFRSF12A-202ENST00000341627 ANKRD40Q6AI12 368 aa16.61■□□□□ 0.25
TNFRSF12A-202ENST00000341627 KLHL10Q6JEL2 608 aa16.61■□□□□ 0.25
TNFRSF12A-202ENST00000341627 TRAPPC11Q7Z392 1133 aa16.61■□□□□ 0.25
TNFRSF12A-202ENST00000341627 METTL23Q86XA0 190 aa16.61■□□□□ 0.25
TNFRSF12A-202ENST00000341627 PALB2Q86YC2 1186 aa16.61■□□□□ 0.25
TNFRSF12A-202ENST00000341627 GLYCTKQ8IVS8 523 aa16.61■□□□□ 0.25
TNFRSF12A-202ENST00000341627 GPT2Q8TD30 523 aa16.61■□□□□ 0.25
TNFRSF12A-202ENST00000341627 CLSTN3Q9BQT9 956 aa16.61■□□□□ 0.25
TNFRSF12A-202ENST00000341627 APOL5Q9BWW9 433 aa16.61■□□□□ 0.25
TNFRSF12A-202ENST00000341627 OXCT2Q9BYC2 517 aaPredicted RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms