RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 KCNH2Q12809 1159 aa17.14■□□□□ 0.33
PTCH1-201ENST00000331920 ERAP1Q9NZ08 941 aa17.14■□□□□ 0.33
PTCH1-201ENST00000331920 SLC39A10Q9ULF5 831 aa17.14■□□□□ 0.33
PTCH1-201ENST00000331920 ZNF57Q68EA5 555 aaPredicted RBP17.14■□□□□ 0.33
PTCH1-201ENST00000331920 VPS37AQ8NEZ2 397 aa17.14■□□□□ 0.33
PTCH1-201ENST00000331920 MRPL4Q9BYD3 311 aaKnown RBP17.14■□□□□ 0.33
PTCH1-201ENST00000331920 ERVK-10P10266 1014 aa17.13■□□□□ 0.33
PTCH1-201ENST00000331920 USPL1Q5W0Q7 1092 aa17.13■□□□□ 0.33
PTCH1-201ENST00000331920 C2CD2LO14523 706 aa17.13■□□□□ 0.33
PTCH1-201ENST00000331920 CDC40O60508 579 aaKnown RBP eCLIP17.13■□□□□ 0.33
PTCH1-201ENST00000331920 CCNE1P24864 410 aa17.13■□□□□ 0.33
PTCH1-201ENST00000331920 PLEKHA7Q6IQ23 1121 aa17.13■□□□□ 0.33
PTCH1-201ENST00000331920 C2orf69Q8N8R5 385 aa17.13■□□□□ 0.33
PTCH1-201ENST00000331920 KIF2BQ8N4N8 673 aa17.13■□□□□ 0.33
PTCH1-201ENST00000331920 RBAKQ9NYW8 714 aaPredicted RBP17.13■□□□□ 0.33
PTCH1-201ENST00000331920 CPA2P48052 419 aa17.13■□□□□ 0.33
PTCH1-201ENST00000331920 DRAP1Q14919 205 aaPredicted RBP17.13■□□□□ 0.33
PTCH1-201ENST00000331920 NDUFA5Q16718 116 aa17.13■□□□□ 0.33
PTCH1-201ENST00000331920 IPCEF1Q8WWN9 437 aaPredicted RBP17.13■□□□□ 0.33
PTCH1-201ENST00000331920 ZNF512Q96ME7 567 aaPredicted RBP17.13■□□□□ 0.33
PTCH1-201ENST00000331920 RAB6BQ9NRW1 208 aa17.13■□□□□ 0.33
PTCH1-201ENST00000331920 UVRAGQ9P2Y5 699 aa17.13■□□□□ 0.33
PTCH1-201ENST00000331920 HERC5Q9UII4 1024 aaKnown RBP17.13■□□□□ 0.33
PTCH1-201ENST00000331920 ATF5Q9Y2D1 282 aaPredicted RBP17.13■□□□□ 0.33
PTCH1-201ENST00000331920 SH3GLB1Q9Y371 365 aa17.13■□□□□ 0.33
PTCH1-201ENST00000331920 POTEMA6NI47 508 aa17.13■□□□□ 0.33
PTCH1-201ENST00000331920 RHOT1Q8IXI2 618 aa17.13■□□□□ 0.33
PTCH1-201ENST00000331920 IQCF2Q8IXL9 164 aa17.13■□□□□ 0.33
PTCH1-201ENST00000331920 CYP39A1Q9NYL5 469 aa17.13■□□□□ 0.33
PTCH1-201ENST00000331920 PCDHA6Q9UN73 950 aa17.13■□□□□ 0.33
PTCH1-201ENST00000331920 PCDHA8Q9Y5H6 950 aa17.13■□□□□ 0.33
PTCH1-201ENST00000331920 DYRK3O43781 588 aa17.13■□□□□ 0.33
PTCH1-201ENST00000331920 MFAP3LO75121 409 aa17.13■□□□□ 0.33
PTCH1-201ENST00000331920 SARSP49591 514 aaKnown RBP17.13■□□□□ 0.33
PTCH1-201ENST00000331920 TRIQKQ629K1 86 aa17.13■□□□□ 0.33
PTCH1-201ENST00000331920 XXYLT1Q8NBI6 393 aa17.13■□□□□ 0.33
PTCH1-201ENST00000331920 GPR101Q96P66 508 aaPredicted RBP17.13■□□□□ 0.33
PTCH1-201ENST00000331920 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.13■□□□□ 0.33
PTCH1-201ENST00000331920 GRAP2O75791 330 aa17.13■□□□□ 0.33
PTCH1-201ENST00000331920 PDGFRBP09619 1106 aa17.13■□□□□ 0.33
PTCH1-201ENST00000331920 HIST2H2ACQ16777 129 aaPredicted RBP17.13■□□□□ 0.33
PTCH1-201ENST00000331920 HIST2H2AA3Q6FI13 130 aa17.13■□□□□ 0.33
PTCH1-201ENST00000331920 GPR141Q7Z602 305 aa17.13■□□□□ 0.33
PTCH1-201ENST00000331920 IPMKQ8NFU5 416 aa17.13■□□□□ 0.33
PTCH1-201ENST00000331920 COPS7BQ9H9Q2 264 aaPredicted RBP17.13■□□□□ 0.33
PTCH1-201ENST00000331920 KLHL20Q9Y2M5 609 aa17.13■□□□□ 0.33
PTCH1-201ENST00000331920 GOLGA8TH3BQL2 631 aa17.12■□□□□ 0.33
PTCH1-201ENST00000331920 RGS4P49798 205 aa17.12■□□□□ 0.33
PTCH1-201ENST00000331920 MTHFD1LQ6UB35 978 aa17.12■□□□□ 0.33
PTCH1-201ENST00000331920 C4orf33Q8N1A6 199 aa17.12■□□□□ 0.33
PTCH1-201ENST00000331920 SLC30A5Q8TAD4 765 aa17.12■□□□□ 0.33
PTCH1-201ENST00000331920 VTA1Q9NP79 307 aa17.12■□□□□ 0.33
PTCH1-201ENST00000331920 IFT140Q96RY7 1462 aa17.12■□□□□ 0.33
PTCH1-201ENST00000331920 MIF4GDA9UHW6 222 aaKnown RBP17.12■□□□□ 0.33
PTCH1-201ENST00000331920 DSG3P32926 999 aa17.12■□□□□ 0.33
PTCH1-201ENST00000331920 CCSAPQ6IQ19 270 aaPredicted RBP17.12■□□□□ 0.33
PTCH1-201ENST00000331920 CMTM5Q96DZ9 223 aa17.12■□□□□ 0.33
PTCH1-201ENST00000331920 ZNF624Q9P2J8 865 aaPredicted RBP17.12■□□□□ 0.33
PTCH1-201ENST00000331920 ADAM30Q9UKF2 790 aa17.12■□□□□ 0.33
PTCH1-201ENST00000331920 POLR1DQ9Y2S0 133 aa17.12■□□□□ 0.33
PTCH1-201ENST00000331920 C12orf60Q5U649 245 aa17.12■□□□□ 0.33
PTCH1-201ENST00000331920 LMBRD2Q68DH5 695 aaPredicted RBP17.12■□□□□ 0.33
PTCH1-201ENST00000331920 TRIM63Q969Q1 353 aa17.12■□□□□ 0.33
PTCH1-201ENST00000331920 NMRK2Q9NPI5 230 aa17.12■□□□□ 0.33
PTCH1-201ENST00000331920 ZFYVE9O95405 1425 aa17.12■□□□□ 0.33
PTCH1-201ENST00000331920 CACTIN-AS1Q8N1I8 211 aa17.12■□□□□ 0.33
PTCH1-201ENST00000331920 WWOXQ9NZC7 414 aa17.12■□□□□ 0.33
PTCH1-201ENST00000331920 PRELPP51888 382 aa17.12■□□□□ 0.33
PTCH1-201ENST00000331920 PLCL1Q15111 1095 aa17.12■□□□□ 0.33
PTCH1-201ENST00000331920 FAM136AQ96C01 138 aa17.12■□□□□ 0.33
PTCH1-201ENST00000331920 MOV10L1Q9BXT6 1211 aaKnown RBP17.12■□□□□ 0.33
PTCH1-201ENST00000331920 PIN4Q9Y237 131 aaKnown RBP17.12■□□□□ 0.33
PTCH1-201ENST00000331920 PSMA4P25789 261 aaKnown RBP17.11■□□□□ 0.33
PTCH1-201ENST00000331920 SERPINB5P36952 375 aa17.11■□□□□ 0.33
PTCH1-201ENST00000331920 GSSP48637 474 aa17.11■□□□□ 0.33
PTCH1-201ENST00000331920 PADI6Q6TGC4 694 aa17.11■□□□□ 0.33
PTCH1-201ENST00000331920 ATP6V1G3Q96LB4 118 aa17.11■□□□□ 0.33
PTCH1-201ENST00000331920 DLGAP2Q9P1A6 1054 aa17.11■□□□□ 0.33
PTCH1-201ENST00000331920 KIF1CO43896 1103 aaKnown RBP17.11■□□□□ 0.33
PTCH1-201ENST00000331920 H2AFYO75367 372 aaKnown RBP17.11■□□□□ 0.33
PTCH1-201ENST00000331920 ATP1A3P13637 1013 aa17.11■□□□□ 0.33
PTCH1-201ENST00000331920 AKR1B1P15121 316 aa17.11■□□□□ 0.33
PTCH1-201ENST00000331920 ZNF23P17027 643 aa17.11■□□□□ 0.33
PTCH1-201ENST00000331920 YWHABP31946 246 aaKnown RBP17.11■□□□□ 0.33
PTCH1-201ENST00000331920 KRT20P35900 424 aa17.11■□□□□ 0.33
PTCH1-201ENST00000331920 NUDT2P50583 147 aa17.11■□□□□ 0.33
PTCH1-201ENST00000331920 TRPC4APQ8TEL6 797 aa17.11■□□□□ 0.33
PTCH1-201ENST00000331920 SRPRBQ9Y5M8 271 aaKnown RBP17.11■□□□□ 0.33
PTCH1-201ENST00000331920 SYCP2Q9BX26 1530 aa17.11■□□□□ 0.33
PTCH1-201ENST00000331920 GON4LQ3T8J9 2241 aa17.11■□□□□ 0.33
PTCH1-201ENST00000331920 RGS2P41220 211 aa17.11■□□□□ 0.33
PTCH1-201ENST00000331920 POTEAQ6S8J7 498 aa17.11■□□□□ 0.33
PTCH1-201ENST00000331920 DDI1Q8WTU0 396 aa17.11■□□□□ 0.33
PTCH1-201ENST00000331920 GRAMD1AQ96CP6 724 aa17.11■□□□□ 0.33
PTCH1-201ENST00000331920 IPPQ9Y573 584 aa17.11■□□□□ 0.33
PTCH1-201ENST00000331920 MAPK9P45984 424 aa17.11■□□□□ 0.33
PTCH1-201ENST00000331920 CACNB3P54284 484 aa17.11■□□□□ 0.33
PTCH1-201ENST00000331920 MAPK11Q15759 364 aa17.11■□□□□ 0.33
PTCH1-201ENST00000331920 ERFEQ4G0M1 354 aa17.11■□□□□ 0.33
PTCH1-201ENST00000331920 MIIPQ5JXC2 388 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 142.6 ms