RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 C2orf16Q68DN1 1984 aa29.9■■■□□ 2.38
ATPAF1-201ENST00000329231 A0A1W2PQ27 194 aa29.89■■■□□ 2.38
ATPAF1-201ENST00000329231 A0A1W2PQ64 194 aa29.89■■■□□ 2.38
ATPAF1-201ENST00000329231 A0A1W2PQD8 194 aa29.89■■■□□ 2.38
ATPAF1-201ENST00000329231 ARHGEF37A1IGU5 675 aa29.89■■■□□ 2.38
ATPAF1-201ENST00000329231 GOLGA8IPA6NC78 632 aa29.89■■■□□ 2.38
ATPAF1-201ENST00000329231 GOLGA8JA6NMD2 632 aa29.89■■■□□ 2.38
ATPAF1-201ENST00000329231 TULP1O00294 542 aaPredicted RBP29.89■■■□□ 2.38
ATPAF1-201ENST00000329231 ABLIM3O94929 683 aa29.89■■■□□ 2.38
ATPAF1-201ENST00000329231 OAZ2O95190 189 aa29.89■■■□□ 2.38
ATPAF1-201ENST00000329231 ELF1P32519 619 aa29.89■■■□□ 2.38
ATPAF1-201ENST00000329231 HOXD13P35453 343 aa29.89■■■□□ 2.38
ATPAF1-201ENST00000329231 SYKP43405 635 aa29.89■■■□□ 2.38
ATPAF1-201ENST00000329231 EFCAB13Q8IY85 973 aa29.89■■■□□ 2.38
ATPAF1-201ENST00000329231 LIMD1Q9UGP4 676 aa29.89■■■□□ 2.38
ATPAF1-201ENST00000329231 DENND4AQ7Z401 1863 aa29.89■■■□□ 2.37
ATPAF1-201ENST00000329231 FAM237AA0A1B0GTK4 181 aa29.88■■■□□ 2.37
ATPAF1-201ENST00000329231 WDR27A2RRH5 827 aa29.88■■■□□ 2.37
ATPAF1-201ENST00000329231 MYL1P05976 194 aa29.88■■■□□ 2.37
ATPAF1-201ENST00000329231 POU2F2P09086 479 aa29.88■■■□□ 2.37
ATPAF1-201ENST00000329231 TYMPP19971 482 aa29.88■■■□□ 2.37
ATPAF1-201ENST00000329231 TPGS2Q68CL5 300 aa29.88■■■□□ 2.37
ATPAF1-201ENST00000329231 CACTINQ8WUQ7 758 aaKnown RBP29.88■■■□□ 2.37
ATPAF1-201ENST00000329231 SCFD1Q8WVM8 642 aa29.88■■■□□ 2.37
ATPAF1-201ENST00000329231 SLC39A2Q9NP94 309 aa29.88■■■□□ 2.37
ATPAF1-201ENST00000329231 TIMM13Q9Y5L4 95 aaPredicted RBP29.88■■■□□ 2.37
ATPAF1-201ENST00000329231 CCL16O15467 120 aa29.87■■■□□ 2.37
ATPAF1-201ENST00000329231 ODC1P11926 461 aa29.87■■■□□ 2.37
ATPAF1-201ENST00000329231 ATF2P15336 505 aa29.87■■■□□ 2.37
ATPAF1-201ENST00000329231 SNRPFP62306 86 aaKnown RBP29.87■■■□□ 2.37
ATPAF1-201ENST00000329231 TFAMQ00059 246 aaKnown RBP29.87■■■□□ 2.37
ATPAF1-201ENST00000329231 SENP8Q96LD8 212 aa29.87■■■□□ 2.37
ATPAF1-201ENST00000329231 KIAA1586Q9HCI6 787 aa29.87■■■□□ 2.37
ATPAF1-201ENST00000329231 POLIQ9UNA4 740 aa29.87■■■□□ 2.37
ATPAF1-201ENST00000329231 ANK1P16157 1881 aa29.87■■■□□ 2.37
ATPAF1-201ENST00000329231 PRRG1O14668 218 aa29.86■■■□□ 2.37
ATPAF1-201ENST00000329231 GBP2P32456 591 aaPredicted RBP29.86■■■□□ 2.37
ATPAF1-201ENST00000329231 NDUFA8P51970 172 aa29.86■■■□□ 2.37
ATPAF1-201ENST00000329231 HS2ST1Q7LGA3 356 aa29.86■■■□□ 2.37
ATPAF1-201ENST00000329231 NELFCDQ8IXH7 590 aa29.86■■■□□ 2.37
ATPAF1-201ENST00000329231 FSIP1Q8NA03 581 aa29.86■■■□□ 2.37
ATPAF1-201ENST00000329231 EXOC1Q9NV70 894 aa29.86■■■□□ 2.37
ATPAF1-201ENST00000329231 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP29.86■■■□□ 2.37
ATPAF1-201ENST00000329231 HSPBP1Q9NZL4 362 aa29.86■■■□□ 2.37
ATPAF1-201ENST00000329231 MAFFQ9ULX9 164 aa29.86■■■□□ 2.37
ATPAF1-201ENST00000329231 SORCS3Q9UPU3 1222 aa29.86■■■□□ 2.37
ATPAF1-201ENST00000329231 TCHHQ07283 1943 aa29.85■■■□□ 2.37
ATPAF1-201ENST00000329231 ZNF233A6NK53 670 aa29.85■■■□□ 2.37
ATPAF1-201ENST00000329231 SPTLC1O15269 473 aa29.85■■■□□ 2.37
ATPAF1-201ENST00000329231 TAF6P49848 677 aa29.85■■■□□ 2.37
ATPAF1-201ENST00000329231 WNT7BP56706 349 aa29.85■■■□□ 2.37
ATPAF1-201ENST00000329231 MTMR3Q13615 1198 aa29.85■■■□□ 2.37
ATPAF1-201ENST00000329231 BMT2Q1RMZ1 405 aa29.85■■■□□ 2.37
ATPAF1-201ENST00000329231 OVOS1Q6IE37 1185 aa29.85■■■□□ 2.37
ATPAF1-201ENST00000329231 TRIM67Q6ZTA4 783 aa29.85■■■□□ 2.37
ATPAF1-201ENST00000329231 GRASPQ7Z6J2 395 aaPredicted RBP29.85■■■□□ 2.37
ATPAF1-201ENST00000329231 TCEAL8Q8IYN2 117 aa29.85■■■□□ 2.37
ATPAF1-201ENST00000329231 GDPD2Q9HCC8 539 aa29.85■■■□□ 2.37
ATPAF1-201ENST00000329231 AGPAT3Q9NRZ7 376 aa29.85■■■□□ 2.37
ATPAF1-201ENST00000329231 DSEQ9UL01 958 aa29.85■■■□□ 2.37
ATPAF1-201ENST00000329231 OR6C75A6NL08 312 aa29.84■■■□□ 2.37
ATPAF1-201ENST00000329231 TGFB1I1O43294 461 aa29.84■■■□□ 2.37
ATPAF1-201ENST00000329231 KLRC4O43908 158 aa29.84■■■□□ 2.37
ATPAF1-201ENST00000329231 N4BP1O75113 896 aaKnown RBP29.84■■■□□ 2.37
ATPAF1-201ENST00000329231 CPB1P15086 417 aa29.84■■■□□ 2.37
ATPAF1-201ENST00000329231 COL9A1P20849 921 aa29.84■■■□□ 2.37
ATPAF1-201ENST00000329231 ANP32AP39687 249 aaKnown RBP29.84■■■□□ 2.37
ATPAF1-201ENST00000329231 PSMD2Q13200 908 aa29.84■■■□□ 2.37
ATPAF1-201ENST00000329231 ZNF560Q96MR9 790 aa29.84■■■□□ 2.37
ATPAF1-201ENST00000329231 CYP4F11Q9HBI6 524 aa29.84■■■□□ 2.37
ATPAF1-201ENST00000329231 PDE11AQ9HCR9 933 aa29.84■■■□□ 2.37
ATPAF1-201ENST00000329231 CGNQ9P2M7 1197 aaKnown RBP29.84■■■□□ 2.37
ATPAF1-201ENST00000329231 AFF4Q9UHB7 1163 aaKnown RBP29.84■■■□□ 2.37
ATPAF1-201ENST00000329231 LRG1P02750 347 aa29.83■■■□□ 2.37
ATPAF1-201ENST00000329231 ASGR2P07307 311 aa29.83■■■□□ 2.37
ATPAF1-201ENST00000329231 FSHRP23945 695 aa29.83■■■□□ 2.37
ATPAF1-201ENST00000329231 PNPLA4P41247 253 aa29.83■■■□□ 2.37
ATPAF1-201ENST00000329231 SIGLEC14Q08ET2 396 aa29.83■■■□□ 2.37
ATPAF1-201ENST00000329231 SURF1Q15526 300 aa29.83■■■□□ 2.37
ATPAF1-201ENST00000329231 GET4Q7L5D6 327 aaPredicted RBP29.83■■■□□ 2.37
ATPAF1-201ENST00000329231 UBALD2Q8IYN6 164 aa29.83■■■□□ 2.37
ATPAF1-201ENST00000329231 EPS15L1Q9UBC2 864 aa29.83■■■□□ 2.37
ATPAF1-201ENST00000329231 ADCY1Q08828 1119 aa29.82■■■□□ 2.36
ATPAF1-201ENST00000329231 KNOP1Q1ED39 458 aaKnown RBP29.82■■■□□ 2.36
ATPAF1-201ENST00000329231 SV2CQ496J9 727 aa29.82■■■□□ 2.36
ATPAF1-201ENST00000329231 KMT5BQ4FZB7 885 aa29.82■■■□□ 2.36
ATPAF1-201ENST00000329231 CBWD2Q8IUF1 395 aa29.82■■■□□ 2.36
ATPAF1-201ENST00000329231 MYADMQ96S97 322 aa29.82■■■□□ 2.36
ATPAF1-201ENST00000329231 CYB561D2O14569 222 aa29.81■■■□□ 2.36
ATPAF1-201ENST00000329231 CYP11A1P05108 521 aa29.81■■■□□ 2.36
ATPAF1-201ENST00000329231 TMEM191BP0C7N4 346 aa29.81■■■□□ 2.36
ATPAF1-201ENST00000329231 MYBPC2Q14324 1141 aa29.81■■■□□ 2.36
ATPAF1-201ENST00000329231 METTL23Q86XA0 190 aa29.81■■■□□ 2.36
ATPAF1-201ENST00000329231 C1orf127Q8N9H9 656 aa29.81■■■□□ 2.36
ATPAF1-201ENST00000329231 IGSF9Q9P2J2 1179 aa29.81■■■□□ 2.36
ATPAF1-201ENST00000329231 ITGA11Q9UKX5 1188 aa29.81■■■□□ 2.36
ATPAF1-201ENST00000329231 ZFP37Q9Y6Q3 630 aaPredicted RBP29.81■■■□□ 2.36
ATPAF1-201ENST00000329231 TMEM221A6NGB7 291 aa29.8■■■□□ 2.36
ATPAF1-201ENST00000329231 KPNA7A9QM74 516 aa29.8■■■□□ 2.36
ATPAF1-201ENST00000329231 M0R296 226 aa29.8■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms