RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 MKNK1Q9BUB5 465 aa17.29■□□□□ 0.36
SFXN1-201ENST00000321442 IP6K2Q9UHH9 426 aa17.29■□□□□ 0.36
SFXN1-201ENST00000321442 SSX2IPQ9Y2D8 614 aa17.29■□□□□ 0.36
SFXN1-201ENST00000321442 YDJCA8MPS7 323 aa17.29■□□□□ 0.36
SFXN1-201ENST00000321442 H3BRJ5 948 aa17.29■□□□□ 0.36
SFXN1-201ENST00000321442 PYGMP11217 842 aa17.29■□□□□ 0.36
SFXN1-201ENST00000321442 YWHABP31946 246 aaKnown RBP17.29■□□□□ 0.36
SFXN1-201ENST00000321442 SPOPLQ6IQ16 392 aa17.29■□□□□ 0.36
SFXN1-201ENST00000321442 NLGN2Q8NFZ4 835 aa17.29■□□□□ 0.36
SFXN1-201ENST00000321442 PPP1R13LQ8WUF5 828 aa17.29■□□□□ 0.36
SFXN1-201ENST00000321442 ATXN7L3BQ96GX2 97 aa17.29■□□□□ 0.36
SFXN1-201ENST00000321442 POP1Q99575 1024 aaKnown RBP17.29■□□□□ 0.36
SFXN1-201ENST00000321442 ACP6Q9NPH0 428 aa17.29■□□□□ 0.36
SFXN1-201ENST00000321442 IRAK4Q9NWZ3 460 aa17.29■□□□□ 0.36
SFXN1-201ENST00000321442 RBAKQ9NYW8 714 aaPredicted RBP17.29■□□□□ 0.36
SFXN1-201ENST00000321442 UBE4BO95155 1302 aa17.29■□□□□ 0.36
SFXN1-201ENST00000321442 WDR46O15213 610 aaKnown RBP17.29■□□□□ 0.36
SFXN1-201ENST00000321442 HSPA4LO95757 839 aa17.29■□□□□ 0.36
SFXN1-201ENST00000321442 ZCCHC18P0CG32 403 aa17.29■□□□□ 0.36
SFXN1-201ENST00000321442 SH3BGRP55822 239 aaPredicted RBP17.29■□□□□ 0.36
SFXN1-201ENST00000321442 TMEM62Q0P6H9 643 aa17.29■□□□□ 0.36
SFXN1-201ENST00000321442 RCN1Q15293 331 aa17.29■□□□□ 0.36
SFXN1-201ENST00000321442 FAM160B1Q5W0V3 765 aa17.29■□□□□ 0.36
SFXN1-201ENST00000321442 CBWD2Q8IUF1 395 aa17.29■□□□□ 0.36
SFXN1-201ENST00000321442 NAF1Q96HR8 494 aaKnown RBP17.29■□□□□ 0.36
SFXN1-201ENST00000321442 SH3GL2Q99962 352 aa17.29■□□□□ 0.36
SFXN1-201ENST00000321442 ADPGKQ9BRR6 497 aa17.29■□□□□ 0.36
SFXN1-201ENST00000321442 GTF3C4Q9UKN8 822 aa17.29■□□□□ 0.36
SFXN1-201ENST00000321442 MYO9BQ13459 2157 aa17.28■□□□□ 0.36
SFXN1-201ENST00000321442 LOC100653049A0A140TA62 436 aa17.28■□□□□ 0.36
SFXN1-201ENST00000321442 KRT34O76011 436 aa17.28■□□□□ 0.36
SFXN1-201ENST00000321442 SOX10P56693 466 aa17.28■□□□□ 0.36
SFXN1-201ENST00000321442 ELF3P78545 371 aaPredicted RBP17.28■□□□□ 0.36
SFXN1-201ENST00000321442 TTC13Q8NBP0 860 aa17.28■□□□□ 0.36
SFXN1-201ENST00000321442 TEKT4Q8WW24 435 aa17.28■□□□□ 0.36
SFXN1-201ENST00000321442 KLC2Q9H0B6 622 aa17.28■□□□□ 0.36
SFXN1-201ENST00000321442 TBX3O15119 743 aa17.28■□□□□ 0.36
SFXN1-201ENST00000321442 APRTP07741 180 aa17.28■□□□□ 0.36
SFXN1-201ENST00000321442 VCAM1P19320 739 aa17.28■□□□□ 0.36
SFXN1-201ENST00000321442 KCNJ2P63252 427 aa17.28■□□□□ 0.36
SFXN1-201ENST00000321442 CCDC125Q86Z20 511 aa17.28■□□□□ 0.36
SFXN1-201ENST00000321442 PPP1R36Q96LQ0 422 aa17.28■□□□□ 0.36
SFXN1-201ENST00000321442 ATP6V0A4Q9HBG4 840 aa17.28■□□□□ 0.36
SFXN1-201ENST00000321442 HEY2Q9UBP5 337 aa17.28■□□□□ 0.36
SFXN1-201ENST00000321442 CTNNAL1Q9UBT7 734 aa17.28■□□□□ 0.36
SFXN1-201ENST00000321442 RIPK2O43353 540 aa17.28■□□□□ 0.36
SFXN1-201ENST00000321442 ATXN3P54252 364 aaPredicted RBP17.28■□□□□ 0.36
SFXN1-201ENST00000321442 CDH6P55285 790 aa17.28■□□□□ 0.36
SFXN1-201ENST00000321442 NLRP9Q7RTR0 991 aa17.28■□□□□ 0.36
SFXN1-201ENST00000321442 MCPH1Q8NEM0 835 aa17.28■□□□□ 0.36
SFXN1-201ENST00000321442 DHX38Q92620 1227 aaKnown RBP17.28■□□□□ 0.36
SFXN1-201ENST00000321442 MTBPQ96DY7 904 aa17.28■□□□□ 0.36
SFXN1-201ENST00000321442 CDHR1Q96JP9 859 aa17.28■□□□□ 0.36
SFXN1-201ENST00000321442 PSMC3IPQ9P2W1 217 aaPredicted RBP17.28■□□□□ 0.36
SFXN1-201ENST00000321442 TLK1Q9UKI8 766 aa17.28■□□□□ 0.36
SFXN1-201ENST00000321442 NAALADL1Q9UQQ1 740 aa17.28■□□□□ 0.36
SFXN1-201ENST00000321442 CALB1P05937 261 aa17.27■□□□□ 0.36
SFXN1-201ENST00000321442 THOC5Q13769 683 aaKnown RBP17.27■□□□□ 0.36
SFXN1-201ENST00000321442 ZNF667Q5HYK9 610 aa17.27■□□□□ 0.36
SFXN1-201ENST00000321442 AGAP11Q8TF27 550 aa17.27■□□□□ 0.36
SFXN1-201ENST00000321442 MCEEQ96PE7 176 aa17.27■□□□□ 0.36
SFXN1-201ENST00000321442 PARVAQ9NVD7 372 aa17.27■□□□□ 0.36
SFXN1-201ENST00000321442 AGO2Q9UKV8 859 aaKnown RBP17.27■□□□□ 0.36
SFXN1-201ENST00000321442 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.27■□□□□ 0.36
SFXN1-201ENST00000321442 RRM1P23921 792 aa17.27■□□□□ 0.36
SFXN1-201ENST00000321442 FNTAP49354 379 aa17.27■□□□□ 0.36
SFXN1-201ENST00000321442 SLC47A2Q86VL8 602 aa17.27■□□□□ 0.36
SFXN1-201ENST00000321442 RNF168Q8IYW5 571 aaPredicted RBP17.27■□□□□ 0.36
SFXN1-201ENST00000321442 GPD1LQ8N335 351 aa17.27■□□□□ 0.36
SFXN1-201ENST00000321442 MIS12Q9H081 205 aa17.27■□□□□ 0.36
SFXN1-201ENST00000321442 TBC1D22BQ9NU19 505 aa17.27■□□□□ 0.36
SFXN1-201ENST00000321442 TTC4O95801 387 aa17.27■□□□□ 0.35
SFXN1-201ENST00000321442 SLC1A1P43005 524 aa17.27■□□□□ 0.35
SFXN1-201ENST00000321442 EIF3EP60228 445 aaKnown RBP17.27■□□□□ 0.35
SFXN1-201ENST00000321442 FAM163AQ96GL9 167 aaPredicted RBP17.27■□□□□ 0.35
SFXN1-201ENST00000321442 TAS2R14Q9NYV8 317 aa17.27■□□□□ 0.35
SFXN1-201ENST00000321442 DCDC2CA8MYV0 355 aa17.26■□□□□ 0.35
SFXN1-201ENST00000321442 SMARCA1P28370 1054 aa17.26■□□□□ 0.35
SFXN1-201ENST00000321442 BCAR1P56945 870 aa17.26■□□□□ 0.35
SFXN1-201ENST00000321442 PSMC5P62195 406 aa17.26■□□□□ 0.35
SFXN1-201ENST00000321442 TFDP2Q14188 446 aa17.26■□□□□ 0.35
SFXN1-201ENST00000321442 SEZ6Q53EL9 994 aa17.26■□□□□ 0.35
SFXN1-201ENST00000321442 RANBP17Q9H2T7 1088 aaKnown RBP17.26■□□□□ 0.35
SFXN1-201ENST00000321442 RIOX1Q9H6W3 641 aa17.26■□□□□ 0.35
SFXN1-201ENST00000321442 RAB6BQ9NRW1 208 aa17.26■□□□□ 0.35
SFXN1-201ENST00000321442 C15orf41Q9Y2V0 281 aa17.26■□□□□ 0.35
SFXN1-201ENST00000321442 MED7O43513 233 aa17.26■□□□□ 0.35
SFXN1-201ENST00000321442 RARAP10276 462 aa17.26■□□□□ 0.35
SFXN1-201ENST00000321442 MRPS35P82673 323 aaKnown RBP17.26■□□□□ 0.35
SFXN1-201ENST00000321442 ZNF699Q32M78 642 aa17.26■□□□□ 0.35
SFXN1-201ENST00000321442 ARID3BQ8IVW6 561 aaPredicted RBP17.26■□□□□ 0.35
SFXN1-201ENST00000321442 EPS15L1Q9UBC2 864 aa17.26■□□□□ 0.35
SFXN1-201ENST00000321442 PCDHA10Q9Y5I2 948 aa17.26■□□□□ 0.35
SFXN1-201ENST00000321442 SETD1AO15047 1707 aaKnown RBP17.26■□□□□ 0.35
SFXN1-201ENST00000321442 ADAMTS3O15072 1205 aa17.26■□□□□ 0.35
SFXN1-201ENST00000321442 MAP3K6O95382 1288 aa17.26■□□□□ 0.35
SFXN1-201ENST00000321442 ARL4AP40617 200 aa17.26■□□□□ 0.35
SFXN1-201ENST00000321442 MTDHQ86UE4 582 aaKnown RBP17.26■□□□□ 0.35
SFXN1-201ENST00000321442 SPATA33Q96N06 139 aa17.26■□□□□ 0.35
SFXN1-201ENST00000321442 SLC38A10Q9HBR0 1119 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms