RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 DUOXA2Q1HG44 320 aa12.63□□□□□ -0.39
PCF11-201ENST00000298281 IZUMO1Q8IYV9 350 aa12.63□□□□□ -0.39
PCF11-201ENST00000298281 ZNF564Q8TBZ8 553 aaPredicted RBP12.63□□□□□ -0.39
PCF11-201ENST00000298281 IPCEF1Q8WWN9 437 aaPredicted RBP12.63□□□□□ -0.39
PCF11-201ENST00000298281 MOV10L1Q9BXT6 1211 aaKnown RBP12.63□□□□□ -0.39
PCF11-201ENST00000298281 ABCB6Q9NP58 842 aa12.63□□□□□ -0.39
PCF11-201ENST00000298281 TRAPPC3O43617 180 aa12.63□□□□□ -0.39
PCF11-201ENST00000298281 KRT33AO76009 404 aa12.63□□□□□ -0.39
PCF11-201ENST00000298281 CHGBP05060 677 aa12.63□□□□□ -0.39
PCF11-201ENST00000298281 GNA15P30679 374 aa12.63□□□□□ -0.39
PCF11-201ENST00000298281 EFNA5P52803 228 aa12.63□□□□□ -0.39
PCF11-201ENST00000298281 PROSER3Q2NL68 480 aa12.63□□□□□ -0.39
PCF11-201ENST00000298281 IL31Q6EBC2 164 aa12.63□□□□□ -0.39
PCF11-201ENST00000298281 ANTXR1Q9H6X2 564 aa12.63□□□□□ -0.39
PCF11-201ENST00000298281 POLG2Q9UHN1 485 aa12.63□□□□□ -0.39
PCF11-201ENST00000298281 ATP6V1HQ9UI12 483 aa12.63□□□□□ -0.39
PCF11-201ENST00000298281 DCTN4Q9UJW0 460 aa12.63□□□□□ -0.39
PCF11-201ENST00000298281 RFX7Q2KHR2 1363 aa12.63□□□□□ -0.39
PCF11-201ENST00000298281 NDUFS3O75489 264 aa12.62□□□□□ -0.39
PCF11-201ENST00000298281 POTEIP0CG38 1075 aa12.62□□□□□ -0.39
PCF11-201ENST00000298281 NECTIN1Q15223 517 aa12.62□□□□□ -0.39
PCF11-201ENST00000298281 CCDC81Q6ZN84 652 aa12.62□□□□□ -0.39
PCF11-201ENST00000298281 DNAJC1Q96KC8 554 aaKnown RBP12.62□□□□□ -0.39
PCF11-201ENST00000298281 CFAP73A6NFT4 308 aa12.62□□□□□ -0.39
PCF11-201ENST00000298281 AKAP5P24588 427 aa12.62□□□□□ -0.39
PCF11-201ENST00000298281 COX10Q12887 443 aa12.62□□□□□ -0.39
PCF11-201ENST00000298281 ITGADQ13349 1161 aa12.62□□□□□ -0.39
PCF11-201ENST00000298281 INPP5AQ14642 412 aa12.62□□□□□ -0.39
PCF11-201ENST00000298281 MDM1Q8TC05 714 aa12.62□□□□□ -0.39
PCF11-201ENST00000298281 PIGOQ8TEQ8 1089 aa12.62□□□□□ -0.39
PCF11-201ENST00000298281 RAD54LQ92698 747 aa12.62□□□□□ -0.39
PCF11-201ENST00000298281 HDHD2Q9H0R4 259 aa12.62□□□□□ -0.39
PCF11-201ENST00000298281 SNX24Q9Y343 169 aa12.62□□□□□ -0.39
PCF11-201ENST00000298281 LCP1P13796 627 aa12.62□□□□□ -0.39
PCF11-201ENST00000298281 RPS6P62753 249 aaKnown RBP12.62□□□□□ -0.39
PCF11-201ENST00000298281 DHX34Q14147 1143 aaKnown RBP12.62□□□□□ -0.39
PCF11-201ENST00000298281 MTHFD1LQ6UB35 978 aa12.62□□□□□ -0.39
PCF11-201ENST00000298281 ARL8AQ96BM9 186 aa12.62□□□□□ -0.39
PCF11-201ENST00000298281 PNKPQ96T60 521 aa12.62□□□□□ -0.39
PCF11-201ENST00000298281 EHD2Q9NZN4 543 aa12.62□□□□□ -0.39
PCF11-201ENST00000298281 USP17L10C9JJH3 530 aa12.62□□□□□ -0.39
PCF11-201ENST00000298281 MYBP10242 640 aa12.62□□□□□ -0.39
PCF11-201ENST00000298281 ALOX15P16050 662 aaPredicted RBP12.62□□□□□ -0.39
PCF11-201ENST00000298281 SPATA2LQ8IUW3 424 aaPredicted RBP12.62□□□□□ -0.39
PCF11-201ENST00000298281 UNC5CLQ8IV45 518 aa12.62□□□□□ -0.39
PCF11-201ENST00000298281 OLFM3Q96PB7 478 aa12.62□□□□□ -0.39
PCF11-201ENST00000298281 PLEKHF1Q96S99 279 aa12.62□□□□□ -0.39
PCF11-201ENST00000298281 PARVAQ9NVD7 372 aa12.62□□□□□ -0.39
PCF11-201ENST00000298281 CD274Q9NZQ7 290 aa12.62□□□□□ -0.39
PCF11-201ENST00000298281 UTYO14607 1347 aa12.62□□□□□ -0.39
PCF11-201ENST00000298281 KBTBD13C9JR72 458 aa12.62□□□□□ -0.39
PCF11-201ENST00000298281 E9PBE3 544 aa12.62□□□□□ -0.39
PCF11-201ENST00000298281 ATP9BO43861 1147 aa12.62□□□□□ -0.39
PCF11-201ENST00000298281 DMTNQ08495 405 aa12.62□□□□□ -0.39
PCF11-201ENST00000298281 SYDE1Q6ZW31 735 aaPredicted RBP12.62□□□□□ -0.39
PCF11-201ENST00000298281 MICALL2Q8IY33 904 aa12.62□□□□□ -0.39
PCF11-201ENST00000298281 C18orf25Q96B23 403 aaPredicted RBP12.62□□□□□ -0.39
PCF11-201ENST00000298281 TMA16Q96EY4 203 aaKnown RBP12.62□□□□□ -0.39
PCF11-201ENST00000298281 PIGUQ9H490 435 aa12.62□□□□□ -0.39
PCF11-201ENST00000298281 TMEM94Q12767 1356 aa12.62□□□□□ -0.39
PCF11-201ENST00000298281 CRKP46108 304 aa12.62□□□□□ -0.39
PCF11-201ENST00000298281 STILQ15468 1287 aa12.62□□□□□ -0.39
PCF11-201ENST00000298281 TAF8Q7Z7C8 310 aa12.62□□□□□ -0.39
PCF11-201ENST00000298281 NUP85Q9BW27 656 aa12.62□□□□□ -0.39
PCF11-201ENST00000298281 SH3GLB1Q9Y371 365 aa12.62□□□□□ -0.39
PCF11-201ENST00000298281 NLRP1Q9C000 1473 aa12.62□□□□□ -0.39
PCF11-201ENST00000298281 NUDT14O95848 222 aa12.61□□□□□ -0.39
PCF11-201ENST00000298281 GCLMP48507 274 aa12.61□□□□□ -0.39
PCF11-201ENST00000298281 ARF3P61204 181 aaPredicted RBP12.61□□□□□ -0.39
PCF11-201ENST00000298281 ARF1P84077 181 aaKnown RBP12.61□□□□□ -0.39
PCF11-201ENST00000298281 GUF1Q8N442 669 aaKnown RBP12.61□□□□□ -0.39
PCF11-201ENST00000298281 SNF8Q96H20 258 aa12.61□□□□□ -0.39
PCF11-201ENST00000298281 FAM129BQ96TA1 746 aa12.61□□□□□ -0.39
PCF11-201ENST00000298281 ABI2Q9NYB9 513 aaPredicted RBP12.61□□□□□ -0.39
PCF11-201ENST00000298281 SLC39A10Q9ULF5 831 aa12.61□□□□□ -0.39
PCF11-201ENST00000298281 TMCC3Q9ULS5 477 aa12.61□□□□□ -0.39
PCF11-201ENST00000298281 PIPSLA2A3N6 862 aa12.61□□□□□ -0.39
PCF11-201ENST00000298281 F8W810 466 aa12.61□□□□□ -0.39
PCF11-201ENST00000298281 CYP7B1O75881 506 aa12.61□□□□□ -0.39
PCF11-201ENST00000298281 HMBSP08397 361 aa12.61□□□□□ -0.39
PCF11-201ENST00000298281 USP11P51784 963 aa12.61□□□□□ -0.39
PCF11-201ENST00000298281 CDK17Q00537 523 aa12.61□□□□□ -0.39
PCF11-201ENST00000298281 PPM1NQ8N819 430 aa12.61□□□□□ -0.39
PCF11-201ENST00000298281 CCDC3Q9BQI4 270 aa12.61□□□□□ -0.39
PCF11-201ENST00000298281 FAM213AQ9BRX8 229 aa12.61□□□□□ -0.39
PCF11-201ENST00000298281 SCN3BQ9NY72 215 aa12.61□□□□□ -0.39
PCF11-201ENST00000298281 FHOD1Q9Y613 1164 aa12.61□□□□□ -0.39
PCF11-201ENST00000298281 MDH1BQ5I0G3 518 aa12.61□□□□□ -0.39
PCF11-201ENST00000298281 ULK3Q6PHR2 472 aa12.61□□□□□ -0.39
PCF11-201ENST00000298281 SFR1Q86XK3 245 aa12.61□□□□□ -0.39
PCF11-201ENST00000298281 SYTL1Q8IYJ3 562 aa12.61□□□□□ -0.39
PCF11-201ENST00000298281 COPS7BQ9H9Q2 264 aaPredicted RBP12.61□□□□□ -0.39
PCF11-201ENST00000298281 ADGRL3Q9HAR2 1447 aa12.61□□□□□ -0.39
PCF11-201ENST00000298281 SOX6P35712 828 aa12.61□□□□□ -0.39
PCF11-201ENST00000298281 ARSJQ5FYB0 599 aaPredicted RBP12.61□□□□□ -0.39
PCF11-201ENST00000298281 NOL9Q5SY16 702 aaKnown RBP12.61□□□□□ -0.39
PCF11-201ENST00000298281 PTRHD1Q6GMV3 140 aaKnown RBP12.61□□□□□ -0.39
PCF11-201ENST00000298281 RHPN2Q8IUC4 686 aa12.61□□□□□ -0.39
PCF11-201ENST00000298281 PPCSQ9HAB8 311 aa12.61□□□□□ -0.39
PCF11-201ENST00000298281 MYO9BQ13459 2157 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms