RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 GLI2P10070 1586 aa17.26■□□□□ 0.35
SH3RF1-201ENST00000284637 KCNA2P16389 499 aa17.26■□□□□ 0.35
SH3RF1-201ENST00000284637 MAP4P27816 1152 aaKnown RBP17.26■□□□□ 0.35
SH3RF1-201ENST00000284637 SBK1Q52WX2 424 aa17.26■□□□□ 0.35
SH3RF1-201ENST00000284637 DDHD1Q8NEL9 900 aa17.26■□□□□ 0.35
SH3RF1-201ENST00000284637 EPS8L3Q8TE67 593 aaKnown RBP17.26■□□□□ 0.35
SH3RF1-201ENST00000284637 CASP10Q92851 521 aa17.26■□□□□ 0.35
SH3RF1-201ENST00000284637 KIF12Q96FN5 646 aa17.26■□□□□ 0.35
SH3RF1-201ENST00000284637 EGFL8Q99944 293 aa17.26■□□□□ 0.35
SH3RF1-201ENST00000284637 ADNPQ9H2P0 1102 aa17.26■□□□□ 0.35
SH3RF1-201ENST00000284637 GID8Q9NWU2 228 aa17.26■□□□□ 0.35
SH3RF1-201ENST00000284637 KIF17Q9P2E2 1029 aa17.26■□□□□ 0.35
SH3RF1-201ENST00000284637 CCDC159P0C7I6 412 aa17.26■□□□□ 0.35
SH3RF1-201ENST00000284637 CRELD2Q6UXH1 353 aaPredicted RBP17.26■□□□□ 0.35
SH3RF1-201ENST00000284637 PREX2Q70Z35 1606 aa17.26■□□□□ 0.35
SH3RF1-201ENST00000284637 ARHGEF1Q92888 912 aaKnown RBP17.26■□□□□ 0.35
SH3RF1-201ENST00000284637 KCNB2Q92953 911 aa17.26■□□□□ 0.35
SH3RF1-201ENST00000284637 TMEM143Q96AN5 459 aa17.26■□□□□ 0.35
SH3RF1-201ENST00000284637 THAP2Q9H0W7 228 aa17.26■□□□□ 0.35
SH3RF1-201ENST00000284637 ITGB1BP2Q9UKP3 347 aa17.26■□□□□ 0.35
SH3RF1-201ENST00000284637 TET3O43151 1660 aa17.26■□□□□ 0.35
SH3RF1-201ENST00000284637 RFX5P48382 616 aaPredicted RBP17.26■□□□□ 0.35
SH3RF1-201ENST00000284637 OVGP1Q12889 678 aa17.26■□□□□ 0.35
SH3RF1-201ENST00000284637 ARHGEF26Q96DR7 871 aa17.26■□□□□ 0.35
SH3RF1-201ENST00000284637 FBXO40Q9UH90 709 aa17.26■□□□□ 0.35
SH3RF1-201ENST00000284637 NAGPAQ9UK23 515 aa17.26■□□□□ 0.35
SH3RF1-201ENST00000284637 FLT1P17948 1338 aa17.25■□□□□ 0.35
SH3RF1-201ENST00000284637 STRNO43815 780 aa17.25■□□□□ 0.35
SH3RF1-201ENST00000284637 SOX11P35716 441 aa17.25■□□□□ 0.35
SH3RF1-201ENST00000284637 SMIM5Q71RC9 77 aa17.25■□□□□ 0.35
SH3RF1-201ENST00000284637 NSL1Q96IY1 281 aa17.25■□□□□ 0.35
SH3RF1-201ENST00000284637 PABPC3Q9H361 631 aaKnown RBP17.25■□□□□ 0.35
SH3RF1-201ENST00000284637 FAM8A1Q9UBU6 413 aa17.25■□□□□ 0.35
SH3RF1-201ENST00000284637 GGA2Q9UJY4 613 aa17.25■□□□□ 0.35
SH3RF1-201ENST00000284637 MTO1Q9Y2Z2 717 aaKnown RBP17.25■□□□□ 0.35
SH3RF1-201ENST00000284637 POLR1AO95602 1720 aaPredicted RBP17.25■□□□□ 0.35
SH3RF1-201ENST00000284637 AKAP10O43572 662 aa17.25■□□□□ 0.35
SH3RF1-201ENST00000284637 BTKQ06187 659 aa17.25■□□□□ 0.35
SH3RF1-201ENST00000284637 IFNEQ86WN2 208 aa17.25■□□□□ 0.35
SH3RF1-201ENST00000284637 SPATA17Q96L03 361 aa17.25■□□□□ 0.35
SH3RF1-201ENST00000284637 KCNK16Q96T55 309 aa17.25■□□□□ 0.35
SH3RF1-201ENST00000284637 DFFAO00273 331 aa17.25■□□□□ 0.35
SH3RF1-201ENST00000284637 NCOA4Q13772 614 aa17.25■□□□□ 0.35
SH3RF1-201ENST00000284637 MXD4Q14582 209 aaPredicted RBP17.25■□□□□ 0.35
SH3RF1-201ENST00000284637 SMTNL2Q2TAL5 461 aa17.25■□□□□ 0.35
SH3RF1-201ENST00000284637 MTHFD1LQ6UB35 978 aa17.25■□□□□ 0.35
SH3RF1-201ENST00000284637 BRINP3Q76B58 766 aa17.25■□□□□ 0.35
SH3RF1-201ENST00000284637 TTLL6Q8N841 843 aa17.25■□□□□ 0.35
SH3RF1-201ENST00000284637 SYN2Q92777 582 aaPredicted RBP17.25■□□□□ 0.35
SH3RF1-201ENST00000284637 MANSC1Q9H8J5 431 aa17.25■□□□□ 0.35
SH3RF1-201ENST00000284637 ARHGAP26Q9UNA1 814 aa17.25■□□□□ 0.35
SH3RF1-201ENST00000284637 GRAP2O75791 330 aa17.25■□□□□ 0.35
SH3RF1-201ENST00000284637 AP3M2P53677 418 aa17.25■□□□□ 0.35
SH3RF1-201ENST00000284637 NUP93Q8N1F7 819 aa17.25■□□□□ 0.35
SH3RF1-201ENST00000284637 DDI1Q8WTU0 396 aa17.25■□□□□ 0.35
SH3RF1-201ENST00000284637 CST8O60676 142 aa17.24■□□□□ 0.35
SH3RF1-201ENST00000284637 RALAP11233 206 aa17.24■□□□□ 0.35
SH3RF1-201ENST00000284637 THEM5Q8N1Q8 247 aa17.24■□□□□ 0.35
SH3RF1-201ENST00000284637 PBXIP1Q96AQ6 731 aa17.24■□□□□ 0.35
SH3RF1-201ENST00000284637 CCT7Q99832 543 aa17.24■□□□□ 0.35
SH3RF1-201ENST00000284637 PI4K2AQ9BTU6 479 aa17.24■□□□□ 0.35
SH3RF1-201ENST00000284637 ANGPT2O15123 496 aa17.24■□□□□ 0.35
SH3RF1-201ENST00000284637 PRPF39Q86UA1 669 aaKnown RBP17.24■□□□□ 0.35
SH3RF1-201ENST00000284637 MAP3K14Q99558 947 aa17.24■□□□□ 0.35
SH3RF1-201ENST00000284637 SPON2Q9BUD6 331 aa17.24■□□□□ 0.35
SH3RF1-201ENST00000284637 PACSIN1Q9BY11 444 aa17.24■□□□□ 0.35
SH3RF1-201ENST00000284637 OLFML3Q9NRN5 406 aa17.24■□□□□ 0.35
SH3RF1-201ENST00000284637 A2ML1A8K2U0 1454 aa17.24■□□□□ 0.35
SH3RF1-201ENST00000284637 NDUFB10O96000 172 aa17.24■□□□□ 0.35
SH3RF1-201ENST00000284637 IREB2P48200 963 aaKnown RBP17.24■□□□□ 0.35
SH3RF1-201ENST00000284637 RTKN2Q8IZC4 609 aa17.24■□□□□ 0.35
SH3RF1-201ENST00000284637 SPATA18Q8TC71 538 aa17.24■□□□□ 0.35
SH3RF1-201ENST00000284637 FAM192AQ9GZU8 254 aa17.24■□□□□ 0.35
SH3RF1-201ENST00000284637 HPSEQ9Y251 543 aa17.24■□□□□ 0.35
SH3RF1-201ENST00000284637 DAGLAQ9Y4D2 1042 aa17.24■□□□□ 0.35
SH3RF1-201ENST00000284637 POLRMTO00411 1230 aaKnown RBP17.24■□□□□ 0.35
SH3RF1-201ENST00000284637 RASA1P20936 1047 aa17.24■□□□□ 0.35
SH3RF1-201ENST00000284637 SERPINB10P48595 397 aa17.24■□□□□ 0.35
SH3RF1-201ENST00000284637 GPR162Q16538 588 aa17.24■□□□□ 0.35
SH3RF1-201ENST00000284637 SLC13A5Q86YT5 568 aaPredicted RBP17.24■□□□□ 0.35
SH3RF1-201ENST00000284637 ASPSCR1Q9BZE9 553 aa17.24■□□□□ 0.35
SH3RF1-201ENST00000284637 SHCBP1LQ9BZQ2 653 aa17.24■□□□□ 0.35
SH3RF1-201ENST00000284637 JPH1Q9HDC5 661 aaPredicted RBP17.24■□□□□ 0.35
SH3RF1-201ENST00000284637 CSF1RP07333 972 aa17.23■□□□□ 0.35
SH3RF1-201ENST00000284637 GFAPP14136 432 aa17.23■□□□□ 0.35
SH3RF1-201ENST00000284637 MAPK7Q13164 816 aa17.23■□□□□ 0.35
SH3RF1-201ENST00000284637 SP110Q9HB58 689 aa17.23■□□□□ 0.35
SH3RF1-201ENST00000284637 C20orf96Q9NUD7 363 aaPredicted RBP17.23■□□□□ 0.35
SH3RF1-201ENST00000284637 AIPL1Q9NZN9 384 aa17.23■□□□□ 0.35
SH3RF1-201ENST00000284637 PCDHB2Q9Y5E7 798 aa17.23■□□□□ 0.35
SH3RF1-201ENST00000284637 TMEM247A6NEH6 219 aa17.23■□□□□ 0.35
SH3RF1-201ENST00000284637 MYL3P08590 195 aa17.23■□□□□ 0.35
SH3RF1-201ENST00000284637 SNRPAP09012 282 aaKnown RBP17.23■□□□□ 0.35
SH3RF1-201ENST00000284637 RBP3P10745 1247 aa17.23■□□□□ 0.35
SH3RF1-201ENST00000284637 HERVK_113P62684 666 aa17.23■□□□□ 0.35
SH3RF1-201ENST00000284637 ELF3P78545 371 aaPredicted RBP17.23■□□□□ 0.35
SH3RF1-201ENST00000284637 R3HDM1Q15032 1099 aaKnown RBP17.23■□□□□ 0.35
SH3RF1-201ENST00000284637 ARID3BQ8IVW6 561 aaPredicted RBP17.23■□□□□ 0.35
SH3RF1-201ENST00000284637 NDUFAF2Q8N183 169 aa17.23■□□□□ 0.35
SH3RF1-201ENST00000284637 UTP6Q9NYH9 597 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms