RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 USP1O94782 785 aa11.61□□□□□ -0.55
MSH6-201ENST00000234420 FKBP9O95302 570 aa11.61□□□□□ -0.55
MSH6-201ENST00000234420 ATP1A3P13637 1013 aa11.61□□□□□ -0.55
MSH6-201ENST00000234420 ADD1P35611 737 aaKnown RBP11.61□□□□□ -0.55
MSH6-201ENST00000234420 TSHZ1Q6ZSZ6 1077 aa11.61□□□□□ -0.55
MSH6-201ENST00000234420 FKBP9P1Q75LS8 142 aa11.61□□□□□ -0.55
MSH6-201ENST00000234420 RIN2Q8WYP3 895 aaPredicted RBP11.61□□□□□ -0.55
MSH6-201ENST00000234420 IL1RL2Q9HB29 575 aa11.61□□□□□ -0.55
MSH6-201ENST00000234420 TBKBP1A7MCY6 615 aa11.61□□□□□ -0.55
MSH6-201ENST00000234420 M0QYV0 167 aa11.61□□□□□ -0.55
MSH6-201ENST00000234420 ABATP80404 500 aa11.61□□□□□ -0.55
MSH6-201ENST00000234420 MAPK6Q16659 721 aa11.61□□□□□ -0.55
MSH6-201ENST00000234420 ZBED8Q8IZ13 594 aa11.61□□□□□ -0.55
MSH6-201ENST00000234420 CLIP3Q96DZ5 547 aa11.61□□□□□ -0.55
MSH6-201ENST00000234420 FOPNLQ96NB1 174 aa11.61□□□□□ -0.55
MSH6-201ENST00000234420 DDX47Q9H0S4 455 aaKnown RBP11.61□□□□□ -0.55
MSH6-201ENST00000234420 HSPBP1Q9NZL4 362 aa11.61□□□□□ -0.55
MSH6-201ENST00000234420 TRIM10Q9UDY6 481 aa11.61□□□□□ -0.55
MSH6-201ENST00000234420 TNKSO95271 1327 aa11.61□□□□□ -0.55
MSH6-201ENST00000234420 CLASP2O75122 1294 aaKnown RBP11.61□□□□□ -0.55
MSH6-201ENST00000234420 ZNF211Q13398 564 aaPredicted RBP11.61□□□□□ -0.55
MSH6-201ENST00000234420 TBC1D19Q8N5T2 526 aa11.61□□□□□ -0.55
MSH6-201ENST00000234420 CSGALNACT1Q8TDX6 532 aa11.61□□□□□ -0.55
MSH6-201ENST00000234420 PLEKHA8Q96JA3 519 aa11.61□□□□□ -0.55
MSH6-201ENST00000234420 TSSK1BQ9BXA7 367 aa11.61□□□□□ -0.55
MSH6-201ENST00000234420 VTI1BQ9UEU0 232 aa11.61□□□□□ -0.55
MSH6-201ENST00000234420 TRIM17Q9Y577 477 aa11.61□□□□□ -0.55
MSH6-201ENST00000234420 HNRNPRO43390 633 aaKnown RBP11.61□□□□□ -0.55
MSH6-201ENST00000234420 CLPTM1O96005 669 aa11.61□□□□□ -0.55
MSH6-201ENST00000234420 S100A6P06703 90 aa11.61□□□□□ -0.55
MSH6-201ENST00000234420 LSP1P33241 339 aa11.61□□□□□ -0.55
MSH6-201ENST00000234420 SERPINH1P50454 418 aaKnown RBP11.61□□□□□ -0.55
MSH6-201ENST00000234420 RAD51Q06609 339 aa11.61□□□□□ -0.55
MSH6-201ENST00000234420 SCARF1Q14162 830 aa11.61□□□□□ -0.55
MSH6-201ENST00000234420 ZSWIM7Q19AV6 140 aa11.61□□□□□ -0.55
MSH6-201ENST00000234420 KCNK16Q96T55 309 aa11.61□□□□□ -0.55
MSH6-201ENST00000234420 CEP44Q9C0F1 390 aa11.61□□□□□ -0.55
MSH6-201ENST00000234420 SERPINB8P50452 374 aa11.6□□□□□ -0.55
MSH6-201ENST00000234420 FCGRTP55899 365 aa11.6□□□□□ -0.55
MSH6-201ENST00000234420 COX10Q12887 443 aa11.6□□□□□ -0.55
MSH6-201ENST00000234420 SCG3Q8WXD2 468 aaKnown RBP11.6□□□□□ -0.55
MSH6-201ENST00000234420 MXD3Q9BW11 206 aa11.6□□□□□ -0.55
MSH6-201ENST00000234420 MOV10L1Q9BXT6 1211 aaKnown RBP11.6□□□□□ -0.55
MSH6-201ENST00000234420 CERS4Q9HA82 394 aa11.6□□□□□ -0.55
MSH6-201ENST00000234420 PRKAB1Q9Y478 270 aa11.6□□□□□ -0.55
MSH6-201ENST00000234420 NEURL1BA8MQ27 555 aa11.6□□□□□ -0.55
MSH6-201ENST00000234420 NUDT14O95848 222 aa11.6□□□□□ -0.55
MSH6-201ENST00000234420 MYL4P12829 197 aa11.6□□□□□ -0.55
MSH6-201ENST00000234420 PDIA2Q13087 525 aaKnown RBP11.6□□□□□ -0.55
MSH6-201ENST00000234420 C6orf10Q5SRN2 563 aa11.6□□□□□ -0.55
MSH6-201ENST00000234420 RNF180Q86T96 592 aa11.6□□□□□ -0.55
MSH6-201ENST00000234420 KLK14Q9P0G3 267 aa11.6□□□□□ -0.55
MSH6-201ENST00000234420 PPP2R3BQ9Y5P8 575 aa11.6□□□□□ -0.55
MSH6-201ENST00000234420 KIF24Q5T7B8 1368 aa11.6□□□□□ -0.55
MSH6-201ENST00000234420 TNNI3P19429 210 aa11.6□□□□□ -0.55
MSH6-201ENST00000234420 TARSP26639 723 aaKnown RBP11.6□□□□□ -0.55
MSH6-201ENST00000234420 LGALS3BPQ08380 585 aa11.6□□□□□ -0.55
MSH6-201ENST00000234420 POM121L1PQ3SYA9 428 aa11.6□□□□□ -0.55
MSH6-201ENST00000234420 LAYNQ6UX15 382 aa11.6□□□□□ -0.55
MSH6-201ENST00000234420 PUS3Q9BZE2 481 aaKnown RBP11.6□□□□□ -0.55
MSH6-201ENST00000234420 PARVAQ9NVD7 372 aa11.6□□□□□ -0.55
MSH6-201ENST00000234420 DBR1Q9UK59 544 aaKnown RBP11.6□□□□□ -0.55
MSH6-201ENST00000234420 URB2Q14146 1524 aaKnown RBP11.6□□□□□ -0.55
MSH6-201ENST00000234420 CCT8L1PA6NM43 557 aa11.6□□□□□ -0.55
MSH6-201ENST00000234420 A8MXQ7 604 aa11.6□□□□□ -0.55
MSH6-201ENST00000234420 RAG1P15918 1043 aa11.6□□□□□ -0.55
MSH6-201ENST00000234420 PSMC3P17980 439 aa11.6□□□□□ -0.55
MSH6-201ENST00000234420 OASLQ15646 514 aaKnown RBP11.6□□□□□ -0.55
MSH6-201ENST00000234420 KBTBD12Q3ZCT8 623 aa11.6□□□□□ -0.55
MSH6-201ENST00000234420 SLC25A41Q8N5S1 370 aa11.6□□□□□ -0.55
MSH6-201ENST00000234420 IL1RAPL1Q9NZN1 696 aa11.6□□□□□ -0.55
MSH6-201ENST00000234420 MYO1DO94832 1006 aa11.6□□□□□ -0.55
MSH6-201ENST00000234420 SARSP49591 514 aaKnown RBP11.6□□□□□ -0.55
MSH6-201ENST00000234420 GPS1Q13098 491 aa11.6□□□□□ -0.55
MSH6-201ENST00000234420 ANGEL2Q5VTE6 544 aaKnown RBP11.6□□□□□ -0.55
MSH6-201ENST00000234420 ATP8B4Q8TF62 1192 aa11.6□□□□□ -0.55
MSH6-201ENST00000234420 SEPT1Q8WYJ6 367 aa11.6□□□□□ -0.55
MSH6-201ENST00000234420 CEP95Q96GE4 821 aa11.6□□□□□ -0.55
MSH6-201ENST00000234420 DCUN1D5Q9BTE7 237 aa11.6□□□□□ -0.55
MSH6-201ENST00000234420 TOPBP1Q92547 1522 aa11.6□□□□□ -0.55
MSH6-201ENST00000234420 USP17L5A8MUK1 530 aa11.6□□□□□ -0.55
MSH6-201ENST00000234420 HPGDP15428 266 aa11.6□□□□□ -0.55
MSH6-201ENST00000234420 KLRC2P26717 231 aa11.6□□□□□ -0.55
MSH6-201ENST00000234420 GJA8P48165 433 aa11.6□□□□□ -0.55
MSH6-201ENST00000234420 VSNL1P62760 191 aa11.6□□□□□ -0.55
MSH6-201ENST00000234420 ALKBH5Q6P6C2 394 aaKnown RBP11.6□□□□□ -0.55
MSH6-201ENST00000234420 C16orf89Q6UX73 402 aa11.6□□□□□ -0.55
MSH6-201ENST00000234420 LPCAT2Q7L5N7 544 aa11.6□□□□□ -0.55
MSH6-201ENST00000234420 FAM162AQ96A26 154 aa11.6□□□□□ -0.55
MSH6-201ENST00000234420 DHTKD1Q96HY7 919 aaPredicted RBP11.6□□□□□ -0.55
MSH6-201ENST00000234420 KIFC1Q9BW19 673 aa11.6□□□□□ -0.55
MSH6-201ENST00000234420 NCAPD3P42695 1498 aa11.59□□□□□ -0.55
MSH6-201ENST00000234420 A0A1W2PRG6 482 aa11.59□□□□□ -0.55
MSH6-201ENST00000234420 TPST1O60507 370 aa11.59□□□□□ -0.55
MSH6-201ENST00000234420 SEC24CP53992 1094 aa11.59□□□□□ -0.55
MSH6-201ENST00000234420 OLFM1Q99784 485 aa11.59□□□□□ -0.55
MSH6-201ENST00000234420 CCDC3Q9BQI4 270 aa11.59□□□□□ -0.55
MSH6-201ENST00000234420 CPVLQ9H3G5 476 aa11.59□□□□□ -0.55
MSH6-201ENST00000234420 VIPAS39Q9H9C1 493 aa11.59□□□□□ -0.55
MSH6-201ENST00000234420 PCDHGB4Q9UN71 923 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms