RNA–Protein interactions for RNA: ENST00000638573.1

COLCA2-206, Transcript of colorectal cancer associated 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COLCA2, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-206ENST00000638573 NAIPQ13075 1403 aa24.93■■□□□ 1.58
COLCA2-206ENST00000638573 DISP3Q9P2K9 1392 aa24.93■■□□□ 1.58
COLCA2-206ENST00000638573 MYO5BQ9ULV0 1848 aa24.92■■□□□ 1.58
COLCA2-206ENST00000638573 TMEM131LA2VDJ0 1609 aa24.92■■□□□ 1.58
COLCA2-206ENST00000638573 RIMS2Q9UQ26 1411 aa24.92■■□□□ 1.58
COLCA2-206ENST00000638573 TOM1O60784 492 aa24.91■■□□□ 1.58
COLCA2-206ENST00000638573 BCANQ96GW7 911 aa24.89■■□□□ 1.58
COLCA2-206ENST00000638573 ILDR2Q71H61 639 aa24.87■■□□□ 1.57
COLCA2-206ENST00000638573 PPP1R15AO75807 674 aaPredicted RBP24.84■■□□□ 1.57
COLCA2-206ENST00000638573 XIRP1Q702N8 1843 aaKnown RBP24.84■■□□□ 1.57
COLCA2-206ENST00000638573 TMEM94Q12767 1356 aa24.83■■□□□ 1.57
COLCA2-206ENST00000638573 PLEKHG1Q9ULL1 1385 aa24.83■■□□□ 1.57
COLCA2-206ENST00000638573 KCNA6P17658 529 aa24.83■■□□□ 1.57
COLCA2-206ENST00000638573 HFM1A2PYH4 1435 aa24.79■■□□□ 1.56
COLCA2-206ENST00000638573 PROSER2Q86WR7 435 aaPredicted RBP24.79■■□□□ 1.56
COLCA2-206ENST00000638573 ADAMTS13Q76LX8 1427 aa24.78■■□□□ 1.56
COLCA2-206ENST00000638573 TRIM52Q96A61 297 aa24.78■■□□□ 1.56
COLCA2-206ENST00000638573 NWD1Q149M9 1564 aa24.76■■□□□ 1.55
COLCA2-206ENST00000638573 SPHKAPQ2M3C7 1700 aa24.75■■□□□ 1.55
COLCA2-206ENST00000638573 CLTCL1P53675 1640 aa24.74■■□□□ 1.55
COLCA2-206ENST00000638573 FOXD1Q16676 465 aa24.72■■□□□ 1.55
COLCA2-206ENST00000638573 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.72■■□□□ 1.55
COLCA2-206ENST00000638573 TBX22Q9Y458 520 aa24.71■■□□□ 1.55
COLCA2-206ENST00000638573 NKTRP30414 1462 aaKnown RBP24.7■■□□□ 1.55
COLCA2-206ENST00000638573 HDGFP51858 240 aaKnown RBP24.7■■□□□ 1.54
COLCA2-206ENST00000638573 ZNF326Q5BKZ1 582 aaKnown RBP24.7■■□□□ 1.54
COLCA2-206ENST00000638573 PTPRUQ92729 1446 aa24.69■■□□□ 1.54
COLCA2-206ENST00000638573 TRPM2O94759 1503 aa24.68■■□□□ 1.54
COLCA2-206ENST00000638573 SLC4A1APQ9BWU0 796 aaKnown RBP24.67■■□□□ 1.54
COLCA2-206ENST00000638573 MED1Q15648 1581 aaPredicted RBP24.67■■□□□ 1.54
COLCA2-206ENST00000638573 NRXN3Q9Y4C0 1643 aa24.65■■□□□ 1.54
COLCA2-206ENST00000638573 CHD2O14647 1828 aaKnown RBP24.65■■□□□ 1.54
COLCA2-206ENST00000638573 NEXMIFQ5QGS0 1516 aa24.62■■□□□ 1.53
COLCA2-206ENST00000638573 AMOTL2Q9Y2J4 779 aa24.61■■□□□ 1.53
COLCA2-206ENST00000638573 METP08581 1390 aa24.61■■□□□ 1.53
COLCA2-206ENST00000638573 DIP2AQ14689 1571 aa24.6■■□□□ 1.53
COLCA2-206ENST00000638573 MSH6P52701 1360 aa24.6■■□□□ 1.53
COLCA2-206ENST00000638573 FAM135BQ49AJ0 1406 aa24.6■■□□□ 1.53
COLCA2-206ENST00000638573 SETBP1Q9Y6X0 1596 aa24.59■■□□□ 1.53
COLCA2-206ENST00000638573 ROBO1Q9Y6N7 1651 aa24.58■■□□□ 1.53
COLCA2-206ENST00000638573 C14orf37Q86TY3 774 aa24.56■■□□□ 1.52
COLCA2-206ENST00000638573 SLAIN2Q9P270 581 aa24.55■■□□□ 1.52
COLCA2-206ENST00000638573 PIK3R4Q99570 1358 aa24.54■■□□□ 1.52
COLCA2-206ENST00000638573 MPHOSPH9Q99550 1183 aa24.52■■□□□ 1.52
COLCA2-206ENST00000638573 XRN1Q8IZH2 1706 aaKnown RBP24.51■■□□□ 1.51
COLCA2-206ENST00000638573 KIF1BO60333 1816 aa24.49■■□□□ 1.51
COLCA2-206ENST00000638573 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.48■■□□□ 1.51
COLCA2-206ENST00000638573 SOCS7O14512 581 aa24.47■■□□□ 1.51
COLCA2-206ENST00000638573 RGL3Q3MIN7 710 aa24.47■■□□□ 1.51
COLCA2-206ENST00000638573 SETD5Q9C0A6 1442 aa24.46■■□□□ 1.51
COLCA2-206ENST00000638573 NCOA3Q9Y6Q9 1424 aa24.46■■□□□ 1.51
COLCA2-206ENST00000638573 C19orf44Q9H6X5 657 aa24.46■■□□□ 1.51
COLCA2-206ENST00000638573 PHF23Q9BUL5 403 aaPredicted RBP24.45■■□□□ 1.5
COLCA2-206ENST00000638573 RAB3GAP2Q9H2M9 1393 aa24.43■■□□□ 1.5
COLCA2-206ENST00000638573 ADGRF5Q8IZF2 1346 aa24.43■■□□□ 1.5
COLCA2-206ENST00000638573 ATF3P18847 181 aa24.43■■□□□ 1.5
COLCA2-206ENST00000638573 RGS17Q9UGC6 210 aaPredicted RBP24.43■■□□□ 1.5
COLCA2-206ENST00000638573 CCDC144AA2RUR9 1427 aa24.43■■□□□ 1.5
COLCA2-206ENST00000638573 SPATA31E1Q6ZUB1 1445 aa24.42■■□□□ 1.5
COLCA2-206ENST00000638573 SETD1AO15047 1707 aaKnown RBP24.41■■□□□ 1.5
COLCA2-206ENST00000638573 VGFO15240 615 aaPredicted RBP24.41■■□□□ 1.5
COLCA2-206ENST00000638573 CADPS2Q86UW7 1296 aa24.41■■□□□ 1.5
COLCA2-206ENST00000638573 ROBO2Q9HCK4 1378 aa24.41■■□□□ 1.5
COLCA2-206ENST00000638573 PPLO60437 1756 aa24.39■■□□□ 1.5
COLCA2-206ENST00000638573 PHLPP1O60346 1717 aa24.39■■□□□ 1.5
COLCA2-206ENST00000638573 BRINP3Q76B58 766 aa24.39■■□□□ 1.49
COLCA2-206ENST00000638573 RPGRIP1LQ68CZ1 1315 aa24.38■■□□□ 1.49
COLCA2-206ENST00000638573 MST1RQ04912 1400 aa24.37■■□□□ 1.49
COLCA2-206ENST00000638573 COL16A1Q07092 1604 aaPredicted RBP24.37■■□□□ 1.49
COLCA2-206ENST00000638573 DDX17Q92841 729 aaKnown RBP24.37■■□□□ 1.49
COLCA2-206ENST00000638573 ADGRL3Q9HAR2 1447 aa24.35■■□□□ 1.49
COLCA2-206ENST00000638573 NALCNQ8IZF0 1738 aa24.35■■□□□ 1.49
COLCA2-206ENST00000638573 DCCP43146 1447 aa24.33■■□□□ 1.49
COLCA2-206ENST00000638573 ASXL1Q8IXJ9 1541 aa24.31■■□□□ 1.48
COLCA2-206ENST00000638573 PTCH1Q13635 1447 aa24.31■■□□□ 1.48
COLCA2-206ENST00000638573 TMEM132EQ6IEE7 984 aa24.31■■□□□ 1.48
COLCA2-206ENST00000638573 AHDC1Q5TGY3 1603 aaPredicted RBP24.31■■□□□ 1.48
COLCA2-206ENST00000638573 JCADQ9P266 1359 aa24.3■■□□□ 1.48
COLCA2-206ENST00000638573 STK26Q9P289 416 aa24.3■■□□□ 1.48
COLCA2-206ENST00000638573 LRP6O75581 1613 aa24.3■■□□□ 1.48
COLCA2-206ENST00000638573 POTEAQ6S8J7 498 aa24.29■■□□□ 1.48
COLCA2-206ENST00000638573 IFT172Q9UG01 1749 aa24.27■■□□□ 1.48
COLCA2-206ENST00000638573 ANKRD30BQ9BXX2 1392 aa24.26■■□□□ 1.47
COLCA2-206ENST00000638573 WAPLQ7Z5K2 1190 aa24.25■■□□□ 1.47
COLCA2-206ENST00000638573 PLEKHH1Q9ULM0 1364 aa24.25■■□□□ 1.47
COLCA2-206ENST00000638573 PIK3C2GO75747 1445 aa24.25■■□□□ 1.47
COLCA2-206ENST00000638573 C1orf167Q5SNV9 1468 aa24.25■■□□□ 1.47
COLCA2-206ENST00000638573 ORAI2Q96SN7 254 aa24.24■■□□□ 1.47
COLCA2-206ENST00000638573 ACIN1Q9UKV3 1341 aaKnown RBP24.24■■□□□ 1.47
COLCA2-206ENST00000638573 PRAG1Q86YV5 1406 aa24.24■■□□□ 1.47
COLCA2-206ENST00000638573 NUTM2BA6NNL0 878 aaPredicted RBP24.2■■□□□ 1.46
COLCA2-206ENST00000638573 NUTM2EB1AL46 878 aaPredicted RBP24.2■■□□□ 1.46
COLCA2-206ENST00000638573 CFAP70Q5T0N1 1121 aa24.2■■□□□ 1.46
COLCA2-206ENST00000638573 NUTM2AQ8IVF1 878 aaPredicted RBP24.2■■□□□ 1.46
COLCA2-206ENST00000638573 LRPPRCP42704 1394 aaKnown RBP24.19■■□□□ 1.46
COLCA2-206ENST00000638573 NHSL1Q5SYE7 1610 aa24.18■■□□□ 1.46
COLCA2-206ENST00000638573 NUTM2FA1L443 756 aa24.18■■□□□ 1.46
COLCA2-206ENST00000638573 NRXN1Q9ULB1 1477 aa24.16■■□□□ 1.46
COLCA2-206ENST00000638573 TECPR2O15040 1411 aa24.16■■□□□ 1.46
COLCA2-206ENST00000638573 SPATA31A6Q5VVP1 1343 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms