RNA–Protein interactions for RNA: ENST00000634620.1

ATP7B-213, Transcript of ATPase copper transporting beta, humanhuman

TSL 1 (best)

Gene ATP7B, Length 5,653 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7B-213ENST00000634620 PCF11O94913 1555 aaKnown RBP13.69□□□□□ -0.22
ATP7B-213ENST00000634620 PRDM11Q9NQV5 511 aa13.69□□□□□ -0.22
ATP7B-213ENST00000634620 GZF1Q9H116 711 aaPredicted RBP13.69□□□□□ -0.22
ATP7B-213ENST00000634620 KIF7Q2M1P5 1343 aa13.68□□□□□ -0.22
ATP7B-213ENST00000634620 CADPS2Q86UW7 1296 aa13.68□□□□□ -0.22
ATP7B-213ENST00000634620 TNNT3P45378 269 aaPredicted RBP13.68□□□□□ -0.22
ATP7B-213ENST00000634620 C8orf37Q96NL8 207 aa13.68□□□□□ -0.22
ATP7B-213ENST00000634620 KIAA2012Q0VF49 1180 aa13.67□□□□□ -0.22
ATP7B-213ENST00000634620 U2AF1L5P0DN76 240 aaPredicted RBP13.67□□□□□ -0.22
ATP7B-213ENST00000634620 U2AF1Q01081 240 aaKnown RBP eCLIP13.67□□□□□ -0.22
ATP7B-213ENST00000634620 DENND4BO75064 1496 aaPredicted RBP13.67□□□□□ -0.22
ATP7B-213ENST00000634620 GBP4Q96PP9 640 aa13.66□□□□□ -0.22
ATP7B-213ENST00000634620 UHRF1BP1Q6BDS2 1440 aa13.66□□□□□ -0.22
ATP7B-213ENST00000634620 PTMSP20962 102 aa13.66□□□□□ -0.22
ATP7B-213ENST00000634620 POLD1P28340 1107 aa13.66□□□□□ -0.22
ATP7B-213ENST00000634620 TAOK2Q9UL54 1235 aa13.66□□□□□ -0.22
ATP7B-213ENST00000634620 SLC26A8Q96RN1 970 aa13.66□□□□□ -0.22
ATP7B-213ENST00000634620 ISY1Q9ULR0 285 aaKnown RBP13.66□□□□□ -0.22
ATP7B-213ENST00000634620 NLRP2Q9NX02 1062 aa13.65□□□□□ -0.22
ATP7B-213ENST00000634620 GOLGA6L3A6NEY3 463 aa13.65□□□□□ -0.22
ATP7B-213ENST00000634620 FGD1P98174 961 aa13.65□□□□□ -0.22
ATP7B-213ENST00000634620 CHMP4AQ9BY43 222 aa13.65□□□□□ -0.22
ATP7B-213ENST00000634620 IPO9Q96P70 1041 aaKnown RBP13.65□□□□□ -0.22
ATP7B-213ENST00000634620 SLKQ9H2G2 1235 aaPredicted RBP13.64□□□□□ -0.23
ATP7B-213ENST00000634620 IPO8O15397 1037 aaKnown RBP13.64□□□□□ -0.23
ATP7B-213ENST00000634620 C1orf141Q5JVX7 400 aa13.64□□□□□ -0.23
ATP7B-213ENST00000634620 RAPGEF4Q8WZA2 1011 aa13.64□□□□□ -0.23
ATP7B-213ENST00000634620 BAG6P46379 1132 aa13.63□□□□□ -0.23
ATP7B-213ENST00000634620 KCNJ4P48050 445 aa13.63□□□□□ -0.23
ATP7B-213ENST00000634620 HSP90AA2PQ14568 343 aaPredicted RBP13.63□□□□□ -0.23
ATP7B-213ENST00000634620 CCDC146Q8IYE0 955 aa13.63□□□□□ -0.23
ATP7B-213ENST00000634620 TULP1O00294 542 aaPredicted RBP13.63□□□□□ -0.23
ATP7B-213ENST00000634620 CALD1Q05682 793 aaKnown RBP13.63□□□□□ -0.23
ATP7B-213ENST00000634620 WDHD1O75717 1129 aaPredicted RBP13.62□□□□□ -0.23
ATP7B-213ENST00000634620 TROQ12816 1431 aaPredicted RBP13.62□□□□□ -0.23
ATP7B-213ENST00000634620 RSPH6AQ9H0K4 717 aa13.62□□□□□ -0.23
ATP7B-213ENST00000634620 RWDD1Q9H446 243 aaPredicted RBP13.62□□□□□ -0.23
ATP7B-213ENST00000634620 TOM1L2Q6ZVM7 507 aa13.61□□□□□ -0.23
ATP7B-213ENST00000634620 LRPPRCP42704 1394 aaKnown RBP13.61□□□□□ -0.23
ATP7B-213ENST00000634620 DAPK1P53355 1430 aa13.61□□□□□ -0.23
ATP7B-213ENST00000634620 MCCP23508 829 aa13.61□□□□□ -0.23
ATP7B-213ENST00000634620 STAC3Q96MF2 364 aa13.61□□□□□ -0.23
ATP7B-213ENST00000634620 NAP1L2Q9ULW6 460 aaPredicted RBP13.61□□□□□ -0.23
ATP7B-213ENST00000634620 EPRSP07814 1512 aaKnown RBP13.61□□□□□ -0.23
ATP7B-213ENST00000634620 ZNF772Q68DY9 489 aaPredicted RBP13.6□□□□□ -0.23
ATP7B-213ENST00000634620 WDR97A6NE52 1622 aa13.6□□□□□ -0.23
ATP7B-213ENST00000634620 PMFBP1Q8TBY8 1022 aa13.6□□□□□ -0.23
ATP7B-213ENST00000634620 TRAK1Q9UPV9 953 aa13.6□□□□□ -0.23
ATP7B-213ENST00000634620 IQGAP2Q13576 1575 aa13.6□□□□□ -0.23
ATP7B-213ENST00000634620 RRP1P56182 461 aaKnown RBP13.6□□□□□ -0.23
ATP7B-213ENST00000634620 FANCAO15360 1455 aa13.6□□□□□ -0.23
ATP7B-213ENST00000634620 CENPJQ9HC77 1338 aaPredicted RBP13.6□□□□□ -0.23
ATP7B-213ENST00000634620 KIAA1107Q9UPP5 1409 aa13.6□□□□□ -0.23
ATP7B-213ENST00000634620 PLEKHH2Q8IVE3 1493 aa13.59□□□□□ -0.23
ATP7B-213ENST00000634620 VSIG10Q8N0Z9 540 aa13.59□□□□□ -0.23
ATP7B-213ENST00000634620 OS9Q13438 667 aaPredicted RBP13.59□□□□□ -0.23
ATP7B-213ENST00000634620 TTC5Q8N0Z6 440 aa13.59□□□□□ -0.23
ATP7B-213ENST00000634620 KIAA0586Q9BVV6 1533 aa13.58□□□□□ -0.23
ATP7B-213ENST00000634620 SLC52A1Q9NWF4 448 aa13.58□□□□□ -0.23
ATP7B-213ENST00000634620 NAIPQ13075 1403 aa13.58□□□□□ -0.24
ATP7B-213ENST00000634620 C9orf84Q5VXU9 1444 aa13.58□□□□□ -0.24
ATP7B-213ENST00000634620 GRIN2AQ12879 1464 aa13.58□□□□□ -0.24
ATP7B-213ENST00000634620 ITPRIPQ8IWB1 547 aa13.57□□□□□ -0.24
ATP7B-213ENST00000634620 CDK13Q14004 1512 aaKnown RBP13.57□□□□□ -0.24
ATP7B-213ENST00000634620 BEGAINQ9BUH8 593 aa13.57□□□□□ -0.24
ATP7B-213ENST00000634620 ROCK1Q13464 1354 aa13.56□□□□□ -0.24
ATP7B-213ENST00000634620 PTPN23Q9H3S7 1636 aa13.56□□□□□ -0.24
ATP7B-213ENST00000634620 ZNF608Q9ULD9 1512 aaPredicted RBP13.56□□□□□ -0.24
ATP7B-213ENST00000634620 TAF7LQ5H9L4 462 aa13.55□□□□□ -0.24
ATP7B-213ENST00000634620 FRAT2O75474 233 aaPredicted RBP13.55□□□□□ -0.24
ATP7B-213ENST00000634620 CERKQ8TCT0 537 aa13.55□□□□□ -0.24
ATP7B-213ENST00000634620 CGNL1Q0VF96 1302 aa13.55□□□□□ -0.24
ATP7B-213ENST00000634620 EVC2Q86UK5 1308 aa13.55□□□□□ -0.24
ATP7B-213ENST00000634620 MINK1Q8N4C8 1332 aaPredicted RBP13.55□□□□□ -0.24
ATP7B-213ENST00000634620 BRD4O60885 1362 aaPredicted RBP13.55□□□□□ -0.24
ATP7B-213ENST00000634620 E9PSI1 815 aa13.55□□□□□ -0.24
ATP7B-213ENST00000634620 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.55□□□□□ -0.243e-6■■□□□ 13.8
ATP7B-213ENST00000634620 SMC4Q9NTJ3 1288 aa13.55□□□□□ -0.24
ATP7B-213ENST00000634620 SYAP1Q96A49 352 aaPredicted RBP13.54□□□□□ -0.24
ATP7B-213ENST00000634620 COG3Q96JB2 828 aa13.54□□□□□ -0.24
ATP7B-213ENST00000634620 ASXL2Q76L83 1435 aa13.54□□□□□ -0.24
ATP7B-213ENST00000634620 EXOC6Q8TAG9 804 aa13.53□□□□□ -0.24
ATP7B-213ENST00000634620 NCKAP5LQ9HCH0 1330 aa13.53□□□□□ -0.24
ATP7B-213ENST00000634620 RXRBP28702 533 aa13.53□□□□□ -0.24
ATP7B-213ENST00000634620 FAM135AQ9P2D6 1515 aa13.53□□□□□ -0.24
ATP7B-213ENST00000634620 CENPQQ7L2Z9 268 aaPredicted RBP13.53□□□□□ -0.24
ATP7B-213ENST00000634620 LRRC59Q96AG4 307 aaKnown RBP13.52□□□□□ -0.24
ATP7B-213ENST00000634620 ABTB2Q8N961 1025 aa13.52□□□□□ -0.25
ATP7B-213ENST00000634620 NGEFQ8N5V2 710 aa13.52□□□□□ -0.25
ATP7B-213ENST00000634620 ADGRL1O94910 1474 aa13.51□□□□□ -0.25
ATP7B-213ENST00000634620 FBXW7Q969H0 707 aa13.51□□□□□ -0.25
ATP7B-213ENST00000634620 URB2Q14146 1524 aaKnown RBP13.51□□□□□ -0.25
ATP7B-213ENST00000634620 FBXO41Q8TF61 875 aa13.5□□□□□ -0.25
ATP7B-213ENST00000634620 NLRP6P59044 892 aa13.5□□□□□ -0.25
ATP7B-213ENST00000634620 PLIN1O60240 522 aa13.5□□□□□ -0.25
ATP7B-213ENST00000634620 CRBNQ96SW2 442 aa13.5□□□□□ -0.25
ATP7B-213ENST00000634620 LMOD3Q0VAK6 560 aa13.5□□□□□ -0.25
ATP7B-213ENST00000634620 GPR162Q16538 588 aa13.5□□□□□ -0.25
ATP7B-213ENST00000634620 CCAR1Q8IX12 1150 aaKnown RBP13.49□□□□□ -0.25
ATP7B-213ENST00000634620 RRP7AQ9Y3A4 280 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms