RNA–Protein interactions for RNA: ENST00000633552.1

GPCPD1-207, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 5

Gene GPCPD1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-207ENST00000633552 ATP1B4Q9UN42 357 aaPredicted RBP9.17□□□□□ -0.94
GPCPD1-207ENST00000633552 MS4A1P11836 297 aa9.16□□□□□ -0.94
GPCPD1-207ENST00000633552 DNAJB2P25686 324 aa9.16□□□□□ -0.94
GPCPD1-207ENST00000633552 SSTR3P32745 418 aaPredicted RBP9.16□□□□□ -0.94
GPCPD1-207ENST00000633552 EYA1Q99502 592 aa9.15□□□□□ -0.94
GPCPD1-207ENST00000633552 SEPT9Q9UHD8 586 aaPredicted RBP9.15□□□□□ -0.94
GPCPD1-207ENST00000633552 C3orf80F5H4A9 247 aa9.14□□□□□ -0.95
GPCPD1-207ENST00000633552 RGS20O76081 388 aa9.14□□□□□ -0.95
GPCPD1-207ENST00000633552 FAM217BQ9NTX9 383 aaPredicted RBP9.14□□□□□ -0.95
GPCPD1-207ENST00000633552 RABGEF1Q9UJ41 708 aa9.14□□□□□ -0.95
GPCPD1-207ENST00000633552 DDX11L8A8MPP1 907 aa9.13□□□□□ -0.95
GPCPD1-207ENST00000633552 ONECUT3O60422 494 aaPredicted RBP9.13□□□□□ -0.95
GPCPD1-207ENST00000633552 BEGAINQ9BUH8 593 aa9.13□□□□□ -0.95
GPCPD1-207ENST00000633552 NBPF3Q9H094 633 aa9.13□□□□□ -0.95
GPCPD1-207ENST00000633552 PLEKHG3A1L390 1219 aa9.12□□□□□ -0.95
GPCPD1-207ENST00000633552 RNF40O75150 1001 aa9.12□□□□□ -0.95
GPCPD1-207ENST00000633552 HDGFP51858 240 aaKnown RBP9.12□□□□□ -0.95
GPCPD1-207ENST00000633552 SULF1Q8IWU6 871 aa9.12□□□□□ -0.95
GPCPD1-207ENST00000633552 RDH13Q8NBN7 331 aa9.12□□□□□ -0.95
GPCPD1-207ENST00000633552 TMUB1Q9BVT8 246 aa9.12□□□□□ -0.95
GPCPD1-207ENST00000633552 SLC4A3P48751 1232 aa9.11□□□□□ -0.95
GPCPD1-207ENST00000633552 VPS9D1Q9Y2B5 631 aa9.11□□□□□ -0.95
GPCPD1-207ENST00000633552 SLC4A5Q9BY07 1137 aa9.1□□□□□ -0.95
GPCPD1-207ENST00000633552 TMEM134Q9H6X4 195 aa9.1□□□□□ -0.95
GPCPD1-207ENST00000633552 PTPN5P54829 565 aa9.09□□□□□ -0.95
GPCPD1-207ENST00000633552 FAM98CQ17RN3 349 aaKnown RBP9.08□□□□□ -0.96
GPCPD1-207ENST00000633552 IFFO2Q5TF58 517 aa9.08□□□□□ -0.96
GPCPD1-207ENST00000633552 MRPL50Q8N5N7 158 aaKnown RBP9.08□□□□□ -0.96
GPCPD1-207ENST00000633552 GOLGA8CPA6NN73 597 aa9.07□□□□□ -0.96
GPCPD1-207ENST00000633552 SWT1Q5T5J6 900 aaKnown RBP9.07□□□□□ -0.96
GPCPD1-207ENST00000633552 RSPH4AQ5TD94 716 aa9.07□□□□□ -0.96
GPCPD1-207ENST00000633552 PCMTD1Q96MG8 357 aaPredicted RBP9.07□□□□□ -0.96
GPCPD1-207ENST00000633552 NUTM1Q86Y26 1132 aa9.06□□□□□ -0.96
GPCPD1-207ENST00000633552 RSPH6AQ9H0K4 717 aa9.06□□□□□ -0.96
GPCPD1-207ENST00000633552 IRX2Q9BZI1 471 aaPredicted RBP9.05□□□□□ -0.96
GPCPD1-207ENST00000633552 CD46P15529 392 aa9.04□□□□□ -0.96
GPCPD1-207ENST00000633552 SAMD7Q7Z3H4 446 aa9.04□□□□□ -0.96
GPCPD1-207ENST00000633552 SH3D19Q5HYK7 790 aa9.03□□□□□ -0.96
GPCPD1-207ENST00000633552 LAPTM4BQ86VI4 370 aa9.03□□□□□ -0.96
GPCPD1-207ENST00000633552 POLR3EQ9NVU0 708 aa9.03□□□□□ -0.96
GPCPD1-207ENST00000633552 DIXDC1Q155Q3 683 aa9.02□□□□□ -0.97
GPCPD1-207ENST00000633552 C14orf37Q86TY3 774 aa9.02□□□□□ -0.97
GPCPD1-207ENST00000633552 SLF2Q8IX21 1173 aa9.02□□□□□ -0.97
GPCPD1-207ENST00000633552 ZFRQ96KR1 1074 aaKnown RBP9.02□□□□□ -0.97
GPCPD1-207ENST00000633552 TBC1D2Q9BYX2 928 aa9.02□□□□□ -0.97
GPCPD1-207ENST00000633552 THSD4Q6ZMP0 1018 aa9.01□□□□□ -0.97
GPCPD1-207ENST00000633552 LRCH3Q96II8 777 aa9.01□□□□□ -0.97
GPCPD1-207ENST00000633552 MYSM1Q5VVJ2 828 aa9□□□□□ -0.97
GPCPD1-207ENST00000633552 WNT2BQ93097 391 aa9□□□□□ -0.97
GPCPD1-207ENST00000633552 A0A0G2JS52 829 aa8.99□□□□□ -0.97
GPCPD1-207ENST00000633552 BHMG1C9JSJ3 638 aaPredicted RBP8.99□□□□□ -0.97
GPCPD1-207ENST00000633552 CLK2P49760 499 aaKnown RBP8.99□□□□□ -0.97
GPCPD1-207ENST00000633552 SKIV2LQ15477 1246 aaKnown RBP8.99□□□□□ -0.97
GPCPD1-207ENST00000633552 ANKK1Q8NFD2 765 aa8.99□□□□□ -0.97
GPCPD1-207ENST00000633552 SPIRE2Q8WWL2 714 aa8.99□□□□□ -0.97
GPCPD1-207ENST00000633552 GOPCQ9HD26 462 aa8.99□□□□□ -0.97
GPCPD1-207ENST00000633552 CFHP08603 1231 aa8.98□□□□□ -0.97
GPCPD1-207ENST00000633552 CSPP1Q1MSJ5 1256 aa8.98□□□□□ -0.97
GPCPD1-207ENST00000633552 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.98□□□□□ -0.97
GPCPD1-207ENST00000633552 KDM4AO75164 1064 aa8.97□□□□□ -0.97
GPCPD1-207ENST00000633552 ERICH6Q7L0X2 663 aa8.97□□□□□ -0.97
GPCPD1-207ENST00000633552 TIMELESSQ9UNS1 1208 aa8.97□□□□□ -0.97
GPCPD1-207ENST00000633552 SLC10A3P09131 477 aa8.96□□□□□ -0.98
GPCPD1-207ENST00000633552 RIC3Q7Z5B4 369 aa8.96□□□□□ -0.98
GPCPD1-207ENST00000633552 NECTIN2Q92692 538 aa8.96□□□□□ -0.98
GPCPD1-207ENST00000633552 GCGRP47871 477 aa8.95□□□□□ -0.98
GPCPD1-207ENST00000633552 PROCA1Q8NCQ7 364 aaPredicted RBP8.95□□□□□ -0.98
GPCPD1-207ENST00000633552 MOXD2PA6NHM9 499 aa8.94□□□□□ -0.98
GPCPD1-207ENST00000633552 NDUFV2P19404 249 aa8.94□□□□□ -0.98
GPCPD1-207ENST00000633552 KMT5BQ4FZB7 885 aa8.94□□□□□ -0.98
GPCPD1-207ENST00000633552 BCAMP50895 628 aa8.93□□□□□ -0.98
GPCPD1-207ENST00000633552 USP46P62068 366 aa8.93□□□□□ -0.98
GPCPD1-207ENST00000633552 LIMD1Q9UGP4 676 aa8.93□□□□□ -0.98
GPCPD1-207ENST00000633552 HPS5Q9UPZ3 1129 aa8.93□□□□□ -0.98
GPCPD1-207ENST00000633552 GRIPAP1Q4V328 841 aa8.92□□□□□ -0.98
GPCPD1-207ENST00000633552 RSBN1LQ6PCB5 846 aaPredicted RBP8.92□□□□□ -0.98
GPCPD1-207ENST00000633552 NUTM2BA6NNL0 878 aaPredicted RBP8.91□□□□□ -0.98
GPCPD1-207ENST00000633552 NUTM2EB1AL46 878 aaPredicted RBP8.91□□□□□ -0.98
GPCPD1-207ENST00000633552 HOXA2O43364 376 aa8.91□□□□□ -0.98
GPCPD1-207ENST00000633552 PPP4CP60510 307 aa8.91□□□□□ -0.98
GPCPD1-207ENST00000633552 NUTM2DQ5VT03 806 aaPredicted RBP8.91□□□□□ -0.98
GPCPD1-207ENST00000633552 NUTM2AQ8IVF1 878 aaPredicted RBP8.91□□□□□ -0.98
GPCPD1-207ENST00000633552 FDX1P10109 184 aa8.9□□□□□ -0.98
GPCPD1-207ENST00000633552 FUT2Q10981 343 aa8.9□□□□□ -0.98
GPCPD1-207ENST00000633552 PRR14Q9BWN1 585 aa8.9□□□□□ -0.98
GPCPD1-207ENST00000633552 SOWAHBA6NEL2 793 aa8.89□□□□□ -0.99
GPCPD1-207ENST00000633552 SPTLC1O15269 473 aa8.89□□□□□ -0.99
GPCPD1-207ENST00000633552 GUCA2AQ02747 115 aa8.89□□□□□ -0.99
GPCPD1-207ENST00000633552 HLA-CQ95604 372 aa8.89□□□□□ -0.99
GPCPD1-207ENST00000633552 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.88□□□□□ -0.99
GPCPD1-207ENST00000633552 TSR3Q9UJK0 312 aaKnown RBP8.88□□□□□ -0.99
GPCPD1-207ENST00000633552 TSC1Q92574 1164 aa8.87□□□□□ -0.99
GPCPD1-207ENST00000633552 C6orf229H3BNL8 230 aa8.86□□□□□ -0.99
GPCPD1-207ENST00000633552 ATP6V1AP38606 617 aa8.86□□□□□ -0.99
GPCPD1-207ENST00000633552 RFC5P40937 340 aa8.86□□□□□ -0.99
GPCPD1-207ENST00000633552 FLIIQ13045 1269 aa8.86□□□□□ -0.99
GPCPD1-207ENST00000633552 PUS10Q3MIT2 529 aaKnown RBP8.86□□□□□ -0.99
GPCPD1-207ENST00000633552 NYAP1Q6ZVC0 841 aa8.86□□□□□ -0.99
GPCPD1-207ENST00000633552 CABLES1Q8TDN4 633 aa8.86□□□□□ -0.99
GPCPD1-207ENST00000633552 ZBTB3Q9H5J0 574 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms