RNA–Protein interactions for RNA: ENST00000630585.1

UBA3-212, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 4 BASIC

Gene UBA3, Length 390 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-212ENST00000630585 HDGFP51858 240 aaKnown RBP18.52■□□□□ 0.56
UBA3-212ENST00000630585 IQGAP3Q86VI3 1631 aa18.52■□□□□ 0.55
UBA3-212ENST00000630585 SENP3Q9H4L4 574 aaPredicted RBP18.51■□□□□ 0.55
UBA3-212ENST00000630585 TMEM131LA2VDJ0 1609 aa18.51■□□□□ 0.55
UBA3-212ENST00000630585 CHGAP10645 457 aaKnown RBP18.5■□□□□ 0.55
UBA3-212ENST00000630585 NUP155O75694 1391 aa18.5■□□□□ 0.55
UBA3-212ENST00000630585 MED1Q15648 1581 aaPredicted RBP18.5■□□□□ 0.55
UBA3-212ENST00000630585 PPP1R15AO75807 674 aaPredicted RBP18.49■□□□□ 0.55
UBA3-212ENST00000630585 PROSER2Q86WR7 435 aaPredicted RBP18.49■□□□□ 0.55
UBA3-212ENST00000630585 ZFYVE9O95405 1425 aa18.49■□□□□ 0.55
UBA3-212ENST00000630585 RIMS2Q9UQ26 1411 aa18.49■□□□□ 0.55
UBA3-212ENST00000630585 TMEM94Q12767 1356 aa18.48■□□□□ 0.55
UBA3-212ENST00000630585 PLEKHG1Q9ULL1 1385 aa18.47■□□□□ 0.55
UBA3-212ENST00000630585 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.46■□□□□ 0.55
UBA3-212ENST00000630585 CHD2O14647 1828 aaKnown RBP18.45■□□□□ 0.54
UBA3-212ENST00000630585 NWD1Q149M9 1564 aa18.44■□□□□ 0.54
UBA3-212ENST00000630585 RBM33Q96EV2 1170 aaKnown RBP18.44■□□□□ 0.54
UBA3-212ENST00000630585 NKTRP30414 1462 aaKnown RBP18.44■□□□□ 0.54
UBA3-212ENST00000630585 TBX22Q9Y458 520 aa18.42■□□□□ 0.54
UBA3-212ENST00000630585 FAM135BQ49AJ0 1406 aa18.41■□□□□ 0.54
UBA3-212ENST00000630585 NUTM2DQ5VT03 806 aaPredicted RBP18.41■□□□□ 0.54
UBA3-212ENST00000630585 PHF23Q9BUL5 403 aaPredicted RBP18.41■□□□□ 0.54
UBA3-212ENST00000630585 RRBP1Q9P2E9 1410 aaKnown RBP18.4■□□□□ 0.54
UBA3-212ENST00000630585 SPHKAPQ2M3C7 1700 aa18.39■□□□□ 0.53
UBA3-212ENST00000630585 MSH6P52701 1360 aa18.39■□□□□ 0.53
UBA3-212ENST00000630585 ROBO1Q9Y6N7 1651 aa18.37■□□□□ 0.53
UBA3-212ENST00000630585 DIP2AQ14689 1571 aa18.36■□□□□ 0.53
UBA3-212ENST00000630585 ADAMTS13Q76LX8 1427 aa18.36■□□□□ 0.53
UBA3-212ENST00000630585 PIK3R4Q99570 1358 aa18.34■□□□□ 0.53
UBA3-212ENST00000630585 SLAIN2Q9P270 581 aa18.34■□□□□ 0.53
UBA3-212ENST00000630585 C14orf37Q86TY3 774 aa18.33■□□□□ 0.52
UBA3-212ENST00000630585 NAIPQ13075 1403 aa18.32■□□□□ 0.52
UBA3-212ENST00000630585 NCOA3Q9Y6Q9 1424 aa18.32■□□□□ 0.52
UBA3-212ENST00000630585 ZNF326Q5BKZ1 582 aaKnown RBP18.32■□□□□ 0.52
UBA3-212ENST00000630585 TRPM2O94759 1503 aa18.31■□□□□ 0.52
UBA3-212ENST00000630585 KIF1BO60333 1816 aa18.3■□□□□ 0.52
UBA3-212ENST00000630585 TRIM52Q96A61 297 aa18.29■□□□□ 0.52
UBA3-212ENST00000630585 AMOTL2Q9Y2J4 779 aa18.29■□□□□ 0.52
UBA3-212ENST00000630585 CLTCL1P53675 1640 aa18.28■□□□□ 0.52
UBA3-212ENST00000630585 PHLPP1O60346 1717 aa18.28■□□□□ 0.52
UBA3-212ENST00000630585 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.28■□□□□ 0.52
UBA3-212ENST00000630585 C19orf44Q9H6X5 657 aa18.27■□□□□ 0.52
UBA3-212ENST00000630585 NRXN3Q9Y4C0 1643 aa18.27■□□□□ 0.51
UBA3-212ENST00000630585 PTPRUQ92729 1446 aa18.26■□□□□ 0.51
UBA3-212ENST00000630585 ATF3P18847 181 aa18.26■□□□□ 0.51
UBA3-212ENST00000630585 CADPS2Q86UW7 1296 aa18.26■□□□□ 0.51
UBA3-212ENST00000630585 SETBP1Q9Y6X0 1596 aa18.25■□□□□ 0.51
UBA3-212ENST00000630585 HFM1A2PYH4 1435 aa18.25■□□□□ 0.51
UBA3-212ENST00000630585 RGS17Q9UGC6 210 aaPredicted RBP18.24■□□□□ 0.51
UBA3-212ENST00000630585 NEXMIFQ5QGS0 1516 aa18.23■□□□□ 0.51
UBA3-212ENST00000630585 SLC4A1APQ9BWU0 796 aaKnown RBP18.22■□□□□ 0.51
UBA3-212ENST00000630585 XRN1Q8IZH2 1706 aaKnown RBP18.22■□□□□ 0.51
UBA3-212ENST00000630585 METP08581 1390 aa18.2■□□□□ 0.5
UBA3-212ENST00000630585 JCADQ9P266 1359 aa18.2■□□□□ 0.5
UBA3-212ENST00000630585 COL16A1Q07092 1604 aaPredicted RBP18.19■□□□□ 0.5
UBA3-212ENST00000630585 VGFO15240 615 aaPredicted RBP18.18■□□□□ 0.5
UBA3-212ENST00000630585 DCCP43146 1447 aa18.16■□□□□ 0.5
UBA3-212ENST00000630585 AHDC1Q5TGY3 1603 aaPredicted RBP18.16■□□□□ 0.5
UBA3-212ENST00000630585 RPGRIP1LQ68CZ1 1315 aa18.15■□□□□ 0.5
UBA3-212ENST00000630585 POTEAQ6S8J7 498 aa18.14■□□□□ 0.49
UBA3-212ENST00000630585 BRINP3Q76B58 766 aa18.14■□□□□ 0.49
UBA3-212ENST00000630585 PPLO60437 1756 aa18.13■□□□□ 0.49
UBA3-212ENST00000630585 FOXD1Q16676 465 aa18.12■□□□□ 0.49
UBA3-212ENST00000630585 SPATA31A6Q5VVP1 1343 aa18.12■□□□□ 0.49
UBA3-212ENST00000630585 MST1RQ04912 1400 aa18.11■□□□□ 0.49
UBA3-212ENST00000630585 ADGRL3Q9HAR2 1447 aa18.11■□□□□ 0.49
UBA3-212ENST00000630585 SETD1AO15047 1707 aaKnown RBP18.11■□□□□ 0.49
UBA3-212ENST00000630585 NALCNQ8IZF0 1738 aa18.1■□□□□ 0.49
UBA3-212ENST00000630585 SHPRHQ149N8 1683 aa18.1■□□□□ 0.49
UBA3-212ENST00000630585 ASXL1Q8IXJ9 1541 aa18.09■□□□□ 0.49
UBA3-212ENST00000630585 MEX3CQ5U5Q3 659 aaKnown RBP18.09■□□□□ 0.49
UBA3-212ENST00000630585 MPHOSPH9Q99550 1183 aa18.09■□□□□ 0.49
UBA3-212ENST00000630585 LRP6O75581 1613 aa18.07■□□□□ 0.48
UBA3-212ENST00000630585 NHSL1Q5SYE7 1610 aa18.07■□□□□ 0.48
UBA3-212ENST00000630585 CCDC144AA2RUR9 1427 aa18.06■□□□□ 0.48
UBA3-212ENST00000630585 PTCH1Q13635 1447 aa18.06■□□□□ 0.48
UBA3-212ENST00000630585 ROBO2Q9HCK4 1378 aa18.05■□□□□ 0.48
UBA3-212ENST00000630585 RGL3Q3MIN7 710 aa18.05■□□□□ 0.48
UBA3-212ENST00000630585 NUTM2BA6NNL0 878 aaPredicted RBP18.04■□□□□ 0.48
UBA3-212ENST00000630585 NUTM2EB1AL46 878 aaPredicted RBP18.04■□□□□ 0.48
UBA3-212ENST00000630585 NUTM2AQ8IVF1 878 aaPredicted RBP18.04■□□□□ 0.48
UBA3-212ENST00000630585 LRRC59Q96AG4 307 aaKnown RBP18.04■□□□□ 0.48
UBA3-212ENST00000630585 SETD5Q9C0A6 1442 aa18.04■□□□□ 0.48
UBA3-212ENST00000630585 ACIN1Q9UKV3 1341 aaKnown RBP18.03■□□□□ 0.48
UBA3-212ENST00000630585 ZNF772Q68DY9 489 aaPredicted RBP18.02■□□□□ 0.48
UBA3-212ENST00000630585 PRAG1Q86YV5 1406 aa18.02■□□□□ 0.48
UBA3-212ENST00000630585 C1orf167Q5SNV9 1468 aa18.01■□□□□ 0.47
UBA3-212ENST00000630585 ADGRF5Q8IZF2 1346 aa18.01■□□□□ 0.47
UBA3-212ENST00000630585 SPATA31E1Q6ZUB1 1445 aa18.01■□□□□ 0.47
UBA3-212ENST00000630585 DDX17Q92841 729 aaKnown RBP18.01■□□□□ 0.47
UBA3-212ENST00000630585 IFT172Q9UG01 1749 aa18.01■□□□□ 0.47
UBA3-212ENST00000630585 ANKRD30BQ9BXX2 1392 aa18■□□□□ 0.47
UBA3-212ENST00000630585 ORAI2Q96SN7 254 aa17.98■□□□□ 0.47
UBA3-212ENST00000630585 STK26Q9P289 416 aa17.97■□□□□ 0.47
UBA3-212ENST00000630585 PNPLA6Q8IY17 1366 aa17.96■□□□□ 0.47
UBA3-212ENST00000630585 LAMC1P11047 1609 aa17.96■□□□□ 0.47
UBA3-212ENST00000630585 LRPPRCP42704 1394 aaKnown RBP17.94■□□□□ 0.46
UBA3-212ENST00000630585 AFF2P51816 1311 aa17.94■□□□□ 0.46
UBA3-212ENST00000630585 CDC42BPGQ6DT37 1551 aa17.93■□□□□ 0.46
UBA3-212ENST00000630585 RXRBP28702 533 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 6.2 ms