RNA–Protein interactions for RNA: ENST00000628124.2

GABRB3-216, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2 BASIC

Gene GABRB3, Length 5,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-216ENST00000628124 TTC5Q8N0Z6 440 aa10.84□□□□□ -0.67
GABRB3-216ENST00000628124 TNIKQ9UKE5 1360 aa10.83□□□□□ -0.68
GABRB3-216ENST00000628124 WASHC2AQ641Q2 1341 aa10.83□□□□□ -0.68
GABRB3-216ENST00000628124 PKD2Q13563 968 aa10.83□□□□□ -0.68
GABRB3-216ENST00000628124 NFXL1Q6ZNB6 911 aa10.83□□□□□ -0.68
GABRB3-216ENST00000628124 XBP1P17861 261 aa10.83□□□□□ -0.68
GABRB3-216ENST00000628124 MSH5O43196 834 aa10.83□□□□□ -0.68
GABRB3-216ENST00000628124 DDX58O95786 925 aaKnown RBP10.82□□□□□ -0.68
GABRB3-216ENST00000628124 TEFQ10587 303 aa10.82□□□□□ -0.68
GABRB3-216ENST00000628124 OLFM4Q6UX06 510 aa10.82□□□□□ -0.68
GABRB3-216ENST00000628124 IFIT2P09913 472 aaKnown RBP10.82□□□□□ -0.68
GABRB3-216ENST00000628124 FAM161AQ3B820 660 aa10.82□□□□□ -0.68
GABRB3-216ENST00000628124 ANO2Q9NQ90 1003 aa10.82□□□□□ -0.68
GABRB3-216ENST00000628124 ROCK1Q13464 1354 aa10.81□□□□□ -0.68
GABRB3-216ENST00000628124 CCP110O43303 1012 aa10.81□□□□□ -0.68
GABRB3-216ENST00000628124 HSP90AB4PQ58FF6 505 aa10.81□□□□□ -0.68
GABRB3-216ENST00000628124 CAGE1Q8TC20 777 aa10.81□□□□□ -0.68
GABRB3-216ENST00000628124 DCAF8L1A6NGE4 600 aa10.81□□□□□ -0.68
GABRB3-216ENST00000628124 ERLIN2O94905 339 aa10.81□□□□□ -0.68
GABRB3-216ENST00000628124 ANKRD45Q5TZF3 282 aa10.81□□□□□ -0.68
GABRB3-216ENST00000628124 C9orf78Q9NZ63 289 aaPredicted RBP10.81□□□□□ -0.68
GABRB3-216ENST00000628124 CGNL1Q0VF96 1302 aa10.81□□□□□ -0.68
GABRB3-216ENST00000628124 GOLGA6L7A0A1B0GV03 622 aa10.81□□□□□ -0.68
GABRB3-216ENST00000628124 CCDC66A2RUB6 948 aa10.8□□□□□ -0.68
GABRB3-216ENST00000628124 GSE1Q14687 1217 aa10.8□□□□□ -0.68
GABRB3-216ENST00000628124 ZKSCAN2Q63HK3 967 aa10.8□□□□□ -0.68
GABRB3-216ENST00000628124 NUCB2P80303 420 aa10.8□□□□□ -0.68
GABRB3-216ENST00000628124 PIP4K2AP48426 406 aaPredicted RBP10.8□□□□□ -0.68
GABRB3-216ENST00000628124 EVA1CP58658 441 aa10.8□□□□□ -0.68
GABRB3-216ENST00000628124 EFCAB2Q5VUJ9 269 aa10.8□□□□□ -0.68
GABRB3-216ENST00000628124 EZRP15311 586 aaKnown RBP10.8□□□□□ -0.68
GABRB3-216ENST00000628124 DHX8Q14562 1220 aaKnown RBP10.8□□□□□ -0.68
GABRB3-216ENST00000628124 LTV1Q96GA3 475 aaPredicted RBP10.79□□□□□ -0.68
GABRB3-216ENST00000628124 ERCC6Q03468 1493 aa10.79□□□□□ -0.68
GABRB3-216ENST00000628124 SYCP1Q15431 976 aa10.79□□□□□ -0.68
GABRB3-216ENST00000628124 IFT57Q9NWB7 429 aa10.79□□□□□ -0.68
GABRB3-216ENST00000628124 SMC3Q9UQE7 1217 aa10.79□□□□□ -0.68
GABRB3-216ENST00000628124 WRNQ14191 1432 aaPredicted RBP eCLIP10.79□□□□□ -0.68
GABRB3-216ENST00000628124 SMARCE1Q969G3 411 aa10.79□□□□□ -0.68
GABRB3-216ENST00000628124 RALYLQ86SE5 291 aaKnown RBP10.79□□□□□ -0.68
GABRB3-216ENST00000628124 SETD5Q9C0A6 1442 aa10.78□□□□□ -0.68
GABRB3-216ENST00000628124 G3BP1Q13283 466 aaKnown RBP eCLIP10.78□□□□□ -0.68
GABRB3-216ENST00000628124 TXLNBQ8N3L3 684 aa10.78□□□□□ -0.68
GABRB3-216ENST00000628124 NEFHP12036 1026 aa10.78□□□□□ -0.68
GABRB3-216ENST00000628124 RBM33Q96EV2 1170 aaKnown RBP10.78□□□□□ -0.68
GABRB3-216ENST00000628124 ERC2O15083 957 aa10.78□□□□□ -0.68
GABRB3-216ENST00000628124 NGEFQ8N5V2 710 aa10.78□□□□□ -0.68
GABRB3-216ENST00000628124 LUC7LQ9NQ29 371 aaKnown RBP10.78□□□□□ -0.68
GABRB3-216ENST00000628124 API5Q9BZZ5 524 aaKnown RBP10.77□□□□□ -0.68
GABRB3-216ENST00000628124 FAM13BQ9NYF5 915 aa10.77□□□□□ -0.68
GABRB3-216ENST00000628124 CHMP5Q9NZZ3 219 aa10.77□□□□□ -0.68
GABRB3-216ENST00000628124 ANKRD30AQ9BXX3 1397 aa10.77□□□□□ -0.69
GABRB3-216ENST00000628124 FILIP1LQ4L180 1135 aa10.77□□□□□ -0.69
GABRB3-216ENST00000628124 TSPYL1Q9H0U9 437 aa10.77□□□□□ -0.69
GABRB3-216ENST00000628124 INCENPQ9NQS7 918 aa10.76□□□□□ -0.69
GABRB3-216ENST00000628124 E9PSI1 815 aa10.76□□□□□ -0.69
GABRB3-216ENST00000628124 TMEM132AQ24JP5 1023 aa10.76□□□□□ -0.69
GABRB3-216ENST00000628124 FBXW7Q969H0 707 aa10.76□□□□□ -0.69
GABRB3-216ENST00000628124 COG3Q96JB2 828 aa10.76□□□□□ -0.69
GABRB3-216ENST00000628124 CARMIL2Q6F5E8 1435 aa10.76□□□□□ -0.69
GABRB3-216ENST00000628124 FOXD4L6Q3SYB3 417 aaPredicted RBP10.76□□□□□ -0.69
GABRB3-216ENST00000628124 FOXD4L3Q6VB84 417 aaPredicted RBP10.76□□□□□ -0.69
GABRB3-216ENST00000628124 DDX19BQ9UMR2 479 aa10.76□□□□□ -0.69
GABRB3-216ENST00000628124 VPS37CA5D8V6 355 aaPredicted RBP10.76□□□□□ -0.69
GABRB3-216ENST00000628124 SEPT7Q16181 437 aaKnown RBP10.76□□□□□ -0.69
GABRB3-216ENST00000628124 FAM43AQ8N2R8 423 aa10.76□□□□□ -0.69
GABRB3-216ENST00000628124 RABEP1Q15276 862 aa10.76□□□□□ -0.69
GABRB3-216ENST00000628124 LEKR1Q6ZMV7 388 aa10.75□□□□□ -0.69
GABRB3-216ENST00000628124 GOLGA6L10A6NI86 522 aa10.75□□□□□ -0.69
GABRB3-216ENST00000628124 LETM1O95202 739 aaPredicted RBP10.75□□□□□ -0.69
GABRB3-216ENST00000628124 NUP155O75694 1391 aa10.75□□□□□ -0.69
GABRB3-216ENST00000628124 SART3Q15020 963 aaKnown RBP10.75□□□□□ -0.69
GABRB3-216ENST00000628124 CCDC39Q9UFE4 941 aa10.75□□□□□ -0.69
GABRB3-216ENST00000628124 TXLNAP40222 546 aa10.75□□□□□ -0.69
GABRB3-216ENST00000628124 INTS3Q68E01 1043 aaKnown RBP10.75□□□□□ -0.69
GABRB3-216ENST00000628124 MAGEC2Q9UBF1 373 aaPredicted RBP10.75□□□□□ -0.69
GABRB3-216ENST00000628124 ARHGAP35Q9NRY4 1499 aa10.74□□□□□ -0.69
GABRB3-216ENST00000628124 RSPH4AQ5TD94 716 aa10.74□□□□□ -0.69
GABRB3-216ENST00000628124 CCAR1Q8IX12 1150 aaKnown RBP10.74□□□□□ -0.69
GABRB3-216ENST00000628124 CCDC146Q8IYE0 955 aa10.74□□□□□ -0.69
GABRB3-216ENST00000628124 KIF7Q2M1P5 1343 aa10.74□□□□□ -0.69
GABRB3-216ENST00000628124 DESP17661 470 aa10.73□□□□□ -0.69
GABRB3-216ENST00000628124 PDILTQ8N807 584 aa10.73□□□□□ -0.69
GABRB3-216ENST00000628124 CDK5RAP3Q96JB5 506 aa10.73□□□□□ -0.69
GABRB3-216ENST00000628124 SDF4Q9BRK5 362 aa10.73□□□□□ -0.69
GABRB3-216ENST00000628124 KIF15Q9NS87 1388 aa10.73□□□□□ -0.69
GABRB3-216ENST00000628124 PSMA5P28066 241 aa10.73□□□□□ -0.69
GABRB3-216ENST00000628124 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.73□□□□□ -0.69
GABRB3-216ENST00000628124 CCDC180Q9P1Z9 1646 aa10.73□□□□□ -0.69
GABRB3-216ENST00000628124 KIAA0754O94854 1291 aa10.73□□□□□ -0.69
GABRB3-216ENST00000628124 ZNHIT6Q9NWK9 470 aaKnown RBP10.73□□□□□ -0.69
GABRB3-216ENST00000628124 CT47B1P0C2W7 299 aaPredicted RBP10.72□□□□□ -0.69
GABRB3-216ENST00000628124 AXDND1Q5T1B0 1012 aaPredicted RBP10.72□□□□□ -0.69
GABRB3-216ENST00000628124 PLCD4Q9BRC7 762 aa10.72□□□□□ -0.69
GABRB3-216ENST00000628124 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.72□□□□□ -0.69
GABRB3-216ENST00000628124 UACAQ9BZF9 1416 aa10.72□□□□□ -0.69
GABRB3-216ENST00000628124 SLC3A2P08195 630 aaKnown RBP10.72□□□□□ -0.69
GABRB3-216ENST00000628124 USP8P40818 1118 aa10.72□□□□□ -0.69
GABRB3-216ENST00000628124 ANKRD62A6NC57 917 aa10.71□□□□□ -0.69
GABRB3-216ENST00000628124 PDE4AP27815 886 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms