RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 PNMA3Q9UL41 463 aa8.38□□□□□ -1.07
CDR1-202ENST00000625883 SMAPO00193 183 aa8.36□□□□□ -1.07
CDR1-202ENST00000625883 ONECUT3O60422 494 aaPredicted RBP8.36□□□□□ -1.07
CDR1-202ENST00000625883 PACS2Q86VP3 889 aa8.36□□□□□ -1.07
CDR1-202ENST00000625883 DNAJB2P25686 324 aa8.35□□□□□ -1.07
CDR1-202ENST00000625883 PCMTD1Q96MG8 357 aaPredicted RBP8.35□□□□□ -1.07
CDR1-202ENST00000625883 ADGRD1Q6QNK2 874 aa8.34□□□□□ -1.07
CDR1-202ENST00000625883 TMEM134Q9H6X4 195 aa8.34□□□□□ -1.07
CDR1-202ENST00000625883 SKIV2LQ15477 1246 aaKnown RBP8.33□□□□□ -1.08
CDR1-202ENST00000625883 DMRTA1Q5VZB9 504 aa8.33□□□□□ -1.08
CDR1-202ENST00000625883 NBPF3Q9H094 633 aa8.33□□□□□ -1.08
CDR1-202ENST00000625883 RSPH6AQ9H0K4 717 aa8.33□□□□□ -1.08
CDR1-202ENST00000625883 KIAA1468Q9P260 1216 aa8.33□□□□□ -1.08
CDR1-202ENST00000625883 CD46P15529 392 aa8.32□□□□□ -1.08
CDR1-202ENST00000625883 MYSM1Q5VVJ2 828 aa8.32□□□□□ -1.08
CDR1-202ENST00000625883 PROCA1Q8NCQ7 364 aaPredicted RBP8.32□□□□□ -1.08
CDR1-202ENST00000625883 TBC1D2Q9BYX2 928 aa8.32□□□□□ -1.08
CDR1-202ENST00000625883 VPS9D1Q9Y2B5 631 aa8.32□□□□□ -1.08
CDR1-202ENST00000625883 RABGEF1Q9UJ41 708 aa8.31□□□□□ -1.08
CDR1-202ENST00000625883 DDX11L8A8MPP1 907 aa8.3□□□□□ -1.08
CDR1-202ENST00000625883 SULF1Q8IWU6 871 aa8.3□□□□□ -1.08
CDR1-202ENST00000625883 POLR3EQ9NVU0 708 aa8.3□□□□□ -1.08
CDR1-202ENST00000625883 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.29□□□□□ -1.08
CDR1-202ENST00000625883 GOLGA8CPA6NN73 597 aa8.28□□□□□ -1.08
CDR1-202ENST00000625883 CLK2P49760 499 aaKnown RBP8.28□□□□□ -1.08
CDR1-202ENST00000625883 SPNS2Q8IVW8 549 aa8.28□□□□□ -1.08
CDR1-202ENST00000625883 SPIRE2Q8WWL2 714 aa8.28□□□□□ -1.08
CDR1-202ENST00000625883 SEPT9Q9UHD8 586 aaPredicted RBP8.28□□□□□ -1.08
CDR1-202ENST00000625883 MRPL50Q8N5N7 158 aaKnown RBP8.27□□□□□ -1.09
CDR1-202ENST00000625883 DIXDC1Q155Q3 683 aa8.26□□□□□ -1.09
CDR1-202ENST00000625883 LAPTM4BQ86VI4 370 aa8.26□□□□□ -1.09
CDR1-202ENST00000625883 LIMD1Q9UGP4 676 aa8.26□□□□□ -1.09
CDR1-202ENST00000625883 MYT1LQ9UL68 1186 aa8.26□□□□□ -1.09
CDR1-202ENST00000625883 HRO43593 1189 aa8.26□□□□□ -1.09
CDR1-202ENST00000625883 SWT1Q5T5J6 900 aaKnown RBP8.26□□□□□ -1.09
CDR1-202ENST00000625883 FBXO31Q5XUX0 539 aaPredicted RBP8.26□□□□□ -1.09
CDR1-202ENST00000625883 FLIIQ13045 1269 aa8.25□□□□□ -1.09
CDR1-202ENST00000625883 RDH13Q8NBN7 331 aa8.25□□□□□ -1.09
CDR1-202ENST00000625883 ZMYND15Q9H091 742 aa8.25□□□□□ -1.09
CDR1-202ENST00000625883 SLC10A3P09131 477 aa8.24□□□□□ -1.09
CDR1-202ENST00000625883 FAM98CQ17RN3 349 aaKnown RBP8.24□□□□□ -1.09
CDR1-202ENST00000625883 RIC3Q7Z5B4 369 aa8.24□□□□□ -1.09
CDR1-202ENST00000625883 MOXD2PA6NHM9 499 aa8.23□□□□□ -1.09
CDR1-202ENST00000625883 BHMG1C9JSJ3 638 aaPredicted RBP8.23□□□□□ -1.09
CDR1-202ENST00000625883 SUPT5HO00267 1087 aaKnown RBP8.23□□□□□ -1.09
CDR1-202ENST00000625883 SPTLC1O15269 473 aa8.23□□□□□ -1.09
CDR1-202ENST00000625883 RSBN1LQ6PCB5 846 aaPredicted RBP8.23□□□□□ -1.09
CDR1-202ENST00000625883 NUTM1Q86Y26 1132 aa8.23□□□□□ -1.09
CDR1-202ENST00000625883 HDGFP51858 240 aaKnown RBP8.22□□□□□ -1.09
CDR1-202ENST00000625883 NDUFV2P19404 249 aa8.21□□□□□ -1.09
CDR1-202ENST00000625883 GCGRP47871 477 aa8.21□□□□□ -1.09
CDR1-202ENST00000625883 SLC4A3P48751 1232 aa8.21□□□□□ -1.09
CDR1-202ENST00000625883 MCM6Q14566 821 aa8.21□□□□□ -1.09
CDR1-202ENST00000625883 TUSC1Q2TAM9 212 aa8.21□□□□□ -1.09
CDR1-202ENST00000625883 RNF166Q96A37 237 aaPredicted RBP8.21□□□□□ -1.09
CDR1-202ENST00000625883 ATP1B4Q9UN42 357 aaPredicted RBP8.21□□□□□ -1.09
CDR1-202ENST00000625883 KDM4AO75164 1064 aa8.2□□□□□ -1.1
CDR1-202ENST00000625883 RFC5P40937 340 aa8.2□□□□□ -1.1
CDR1-202ENST00000625883 PPP2R2DQ66LE6 453 aa8.2□□□□□ -1.1
CDR1-202ENST00000625883 GJA5P36382 358 aa8.19□□□□□ -1.1
CDR1-202ENST00000625883 MMRN1Q13201 1228 aa8.19□□□□□ -1.1
CDR1-202ENST00000625883 SAMD7Q7Z3H4 446 aa8.19□□□□□ -1.1
CDR1-202ENST00000625883 ANKK1Q8NFD2 765 aa8.19□□□□□ -1.1
CDR1-202ENST00000625883 HOXA2O43364 376 aa8.19□□□□□ -1.1
CDR1-202ENST00000625883 PCDHB15Q9Y5E8 787 aa8.19□□□□□ -1.1
CDR1-202ENST00000625883 QPCTQ16769 361 aa8.18□□□□□ -1.1
CDR1-202ENST00000625883 CSPP1Q1MSJ5 1256 aa8.18□□□□□ -1.1
CDR1-202ENST00000625883 RSPH4AQ5TD94 716 aa8.18□□□□□ -1.1
CDR1-202ENST00000625883 WNT2BQ93097 391 aa8.18□□□□□ -1.1
CDR1-202ENST00000625883 LILRB3O75022 631 aa8.17□□□□□ -1.1
CDR1-202ENST00000625883 USP46P62068 366 aa8.17□□□□□ -1.1
CDR1-202ENST00000625883 SLF2Q8IX21 1173 aa8.17□□□□□ -1.1
CDR1-202ENST00000625883 NECTIN2Q92692 538 aa8.17□□□□□ -1.1
CDR1-202ENST00000625883 HLA-CQ95604 372 aa8.17□□□□□ -1.1
CDR1-202ENST00000625883 ZFRQ96KR1 1074 aaKnown RBP8.17□□□□□ -1.1
CDR1-202ENST00000625883 GUCA2AQ02747 115 aa8.15□□□□□ -1.1
CDR1-202ENST00000625883 CLUAP1Q96AJ1 413 aa8.15□□□□□ -1.1
CDR1-202ENST00000625883 KCTD12Q96CX2 325 aaKnown RBP8.15□□□□□ -1.1
CDR1-202ENST00000625883 LRCH3Q96II8 777 aa8.15□□□□□ -1.1
CDR1-202ENST00000625883 PCDHGC3Q9UN70 934 aa8.15□□□□□ -1.1
CDR1-202ENST00000625883 UBTFP17480 764 aaKnown RBP8.14□□□□□ -1.11
CDR1-202ENST00000625883 RTL5Q5HYW3 569 aaPredicted RBP8.14□□□□□ -1.11
CDR1-202ENST00000625883 BANK1Q8NDB2 785 aa8.14□□□□□ -1.11
CDR1-202ENST00000625883 CABLES1Q8TDN4 633 aa8.14□□□□□ -1.11
CDR1-202ENST00000625883 SNRKQ9NRH2 765 aa8.14□□□□□ -1.11
CDR1-202ENST00000625883 HCSTQ9UBK5 93 aa8.14□□□□□ -1.11
CDR1-202ENST00000625883 SPDYE5A6NIY4 337 aa8.13□□□□□ -1.11
CDR1-202ENST00000625883 A6NJR5 290 aa8.13□□□□□ -1.11
CDR1-202ENST00000625883 CFHP08603 1231 aa8.13□□□□□ -1.11
CDR1-202ENST00000625883 FDX1P10109 184 aa8.13□□□□□ -1.11
CDR1-202ENST00000625883 TMEM259Q4ZIN3 620 aa8.13□□□□□ -1.11
CDR1-202ENST00000625883 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.13□□□□□ -1.11
CDR1-202ENST00000625883 RNF40O75150 1001 aa8.13□□□□□ -1.11
CDR1-202ENST00000625883 FUT2Q10981 343 aa8.13□□□□□ -1.11
CDR1-202ENST00000625883 PRPF38BQ5VTL8 546 aaKnown RBP8.13□□□□□ -1.11
CDR1-202ENST00000625883 POM121Q96HA1 1249 aa8.13□□□□□ -1.11
CDR1-202ENST00000625883 SOWAHBA6NEL2 793 aa8.12□□□□□ -1.11
CDR1-202ENST00000625883 HRCP23327 699 aa8.12□□□□□ -1.11
CDR1-202ENST00000625883 THSD4Q6ZMP0 1018 aa8.12□□□□□ -1.11
CDR1-202ENST00000625883 NYAP1Q6ZVC0 841 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms