RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 ZNF697Q5TEC3 545 aa10.46□□□□□ -0.74
CUL3-216ENST00000617432 TTC13Q8NBP0 860 aa10.46□□□□□ -0.74
CUL3-216ENST00000617432 GDF9O60383 454 aa10.45□□□□□ -0.74
CUL3-216ENST00000617432 LIAT1Q6ZQX7 453 aa10.44□□□□□ -0.74
CUL3-216ENST00000617432 CDHR5Q9HBB8 845 aa10.44□□□□□ -0.74
CUL3-216ENST00000617432 BLOC1S3Q6QNY0 202 aa10.43□□□□□ -0.74
CUL3-216ENST00000617432 AAASQ9NRG9 546 aa10.43□□□□□ -0.74
CUL3-216ENST00000617432 OSBPP22059 807 aa10.41□□□□□ -0.74
CUL3-216ENST00000617432 TNFRSF10AO00220 468 aa10.41□□□□□ -0.74
CUL3-216ENST00000617432 ST8SIA5O15466 376 aa10.41□□□□□ -0.74
CUL3-216ENST00000617432 PADI6Q6TGC4 694 aa10.4□□□□□ -0.75
CUL3-216ENST00000617432 ARIH1Q9Y4X5 557 aaPredicted RBP10.4□□□□□ -0.75
CUL3-216ENST00000617432 PPEF1O14829 653 aaPredicted RBP10.39□□□□□ -0.75
CUL3-216ENST00000617432 EYA1Q99502 592 aa10.39□□□□□ -0.75
CUL3-216ENST00000617432 STK17AQ9UEE5 414 aa10.39□□□□□ -0.75
CUL3-216ENST00000617432 S1PR4O95977 384 aa10.38□□□□□ -0.75
CUL3-216ENST00000617432 TLL1O43897 1013 aa10.37□□□□□ -0.75
CUL3-216ENST00000617432 WFS1O76024 890 aa10.37□□□□□ -0.75
CUL3-216ENST00000617432 NPDC1Q9NQX5 325 aaPredicted RBP10.36□□□□□ -0.75
CUL3-216ENST00000617432 LMOD2Q6P5Q4 547 aa10.35□□□□□ -0.75
CUL3-216ENST00000617432 CRIPAKQ8N1N5 446 aa10.35□□□□□ -0.75
CUL3-216ENST00000617432 DCAF8L2P0C7V8 631 aa10.34□□□□□ -0.75
CUL3-216ENST00000617432 E2F4Q16254 413 aa10.33□□□□□ -0.76
CUL3-216ENST00000617432 ACTN4O43707 911 aaKnown RBP10.33□□□□□ -0.76
CUL3-216ENST00000617432 KMT5BQ4FZB7 885 aa10.33□□□□□ -0.76
CUL3-216ENST00000617432 WIPF1O43516 503 aa10.32□□□□□ -0.76
CUL3-216ENST00000617432 ADH1BP00325 375 aa10.32□□□□□ -0.76
CUL3-216ENST00000617432 INSM1Q01101 510 aaPredicted RBP10.32□□□□□ -0.76
CUL3-216ENST00000617432 PKD2L1Q9P0L9 805 aa10.3□□□□□ -0.76
CUL3-216ENST00000617432 AVPP01185 164 aa10.29□□□□□ -0.76
CUL3-216ENST00000617432 SLC6A16Q9GZN6 736 aa10.29□□□□□ -0.76
CUL3-216ENST00000617432 C11orf95C9JLR9 678 aaPredicted RBP10.28□□□□□ -0.76
CUL3-216ENST00000617432 NR1I2O75469 434 aa10.28□□□□□ -0.76
CUL3-216ENST00000617432 DNAJB2P25686 324 aa10.28□□□□□ -0.76
CUL3-216ENST00000617432 NFX1Q12986 1120 aaKnown RBP10.28□□□□□ -0.76
CUL3-216ENST00000617432 PLA2G2CQ5R387 149 aa10.28□□□□□ -0.76
CUL3-216ENST00000617432 DACH1Q9UI36 760 aa10.28□□□□□ -0.76
CUL3-216ENST00000617432 FOXC1Q12948 553 aa10.27□□□□□ -0.77
CUL3-216ENST00000617432 GMPR2Q9P2T1 348 aaKnown RBP10.27□□□□□ -0.77
CUL3-216ENST00000617432 AXIN1O15169 862 aa10.26□□□□□ -0.77
CUL3-216ENST00000617432 CTC1Q2NKJ3 1217 aa10.26□□□□□ -0.77
CUL3-216ENST00000617432 TMEM134Q9H6X4 195 aa10.24□□□□□ -0.77
CUL3-216ENST00000617432 CFHP08603 1231 aa10.24□□□□□ -0.77
CUL3-216ENST00000617432 TOR4AQ9NXH8 423 aa10.24□□□□□ -0.77
CUL3-216ENST00000617432 RPIAP49247 311 aa10.23□□□□□ -0.77
CUL3-216ENST00000617432 SMCPP49901 116 aaPredicted RBP10.23□□□□□ -0.77
CUL3-216ENST00000617432 RBM46Q8TBY0 533 aaKnown RBP10.23□□□□□ -0.77
CUL3-216ENST00000617432 CYP4X1Q8N118 509 aa10.21□□□□□ -0.78
CUL3-216ENST00000617432 WDR70Q9NW82 654 aa10.21□□□□□ -0.78
CUL3-216ENST00000617432 CD2BP2O95400 341 aaKnown RBP10.19□□□□□ -0.78
CUL3-216ENST00000617432 SCUBE3Q8IX30 993 aa10.18□□□□□ -0.78
CUL3-216ENST00000617432 RCCD1A6NED2 376 aa10.16□□□□□ -0.78
CUL3-216ENST00000617432 SLC10A3P09131 477 aa10.16□□□□□ -0.78
CUL3-216ENST00000617432 SPSB2Q99619 263 aa10.16□□□□□ -0.78
CUL3-216ENST00000617432 BBXQ8WY36 941 aaPredicted RBP10.16□□□□□ -0.78
CUL3-216ENST00000617432 ADGRG1Q9Y653 693 aa10.16□□□□□ -0.78
CUL3-216ENST00000617432 TERTO14746 1132 aaKnown RBP10.14□□□□□ -0.79
CUL3-216ENST00000617432 LOC100996750A0A140TA64 210 aa10.13□□□□□ -0.79
CUL3-216ENST00000617432 KRTAP4-6Q9BYQ5 205 aa10.13□□□□□ -0.79
CUL3-216ENST00000617432 PTGDRQ13258 359 aa10.12□□□□□ -0.79
CUL3-216ENST00000617432 LCE2CQ5TA81 110 aa10.11□□□□□ -0.79
CUL3-216ENST00000617432 TTC24A2A3L6 582 aaPredicted RBP10.1□□□□□ -0.79
CUL3-216ENST00000617432 FAM181BA6NEQ2 426 aa10.1□□□□□ -0.79
CUL3-216ENST00000617432 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.09□□□□□ -0.79
CUL3-216ENST00000617432 RSPH4AQ5TD94 716 aa10.09□□□□□ -0.79
CUL3-216ENST00000617432 SENP2Q9HC62 589 aa10.09□□□□□ -0.79
CUL3-216ENST00000617432 ATP13A2Q9NQ11 1180 aa10.09□□□□□ -0.79
CUL3-216ENST00000617432 FCF1Q9Y324 198 aaKnown RBP10.09□□□□□ -0.79
CUL3-216ENST00000617432 SNRPBP14678 240 aaKnown RBP10.08□□□□□ -0.8
CUL3-216ENST00000617432 PUS10Q3MIT2 529 aaKnown RBP10.08□□□□□ -0.8
CUL3-216ENST00000617432 SPRYD3Q8NCJ5 442 aa10.07□□□□□ -0.8
CUL3-216ENST00000617432 TRIM47Q96LD4 638 aa10.07□□□□□ -0.8
CUL3-216ENST00000617432 CCDC180Q9P1Z9 1646 aa10.07□□□□□ -0.8
CUL3-216ENST00000617432 SNIP1Q8TAD8 396 aaKnown RBP10.05□□□□□ -0.8
CUL3-216ENST00000617432 ABCC9O60706 1549 aa10.04□□□□□ -0.8
CUL3-216ENST00000617432 SMPD1P17405 629 aa10.04□□□□□ -0.8
CUL3-216ENST00000617432 FAM161AQ3B820 660 aa10.04□□□□□ -0.8
CUL3-216ENST00000617432 KIFC2Q96AC6 838 aa10.04□□□□□ -0.8
CUL3-216ENST00000617432 ZBTB24O43167 697 aaPredicted RBP10.03□□□□□ -0.8
CUL3-216ENST00000617432 THAP11Q96EK4 314 aa10.03□□□□□ -0.8
CUL3-216ENST00000617432 WNT7AO00755 349 aa10.02□□□□□ -0.81
CUL3-216ENST00000617432 MLLT3P42568 568 aaPredicted RBP10.01□□□□□ -0.81
CUL3-216ENST00000617432 MORN1Q5T089 497 aa10.01□□□□□ -0.81
CUL3-216ENST00000617432 FAM160A2Q8N612 972 aaPredicted RBP10.01□□□□□ -0.81
CUL3-216ENST00000617432 SLC16A10Q8TF71 515 aa10.01□□□□□ -0.81
CUL3-216ENST00000617432 FMNL1O95466 1100 aaPredicted RBP10□□□□□ -0.81
CUL3-216ENST00000617432 OATP04181 439 aa10□□□□□ -0.81
CUL3-216ENST00000617432 PXYLP1Q8TE99 480 aa9.99□□□□□ -0.81
CUL3-216ENST00000617432 SALL2Q9Y467 1007 aaPredicted RBP9.98□□□□□ -0.81
CUL3-216ENST00000617432 NUTM2FA1L443 756 aa9.97□□□□□ -0.81
CUL3-216ENST00000617432 ZSCAN1Q8NBB4 408 aa9.97□□□□□ -0.81
CUL3-216ENST00000617432 ATP6V1AP38606 617 aa9.96□□□□□ -0.82
CUL3-216ENST00000617432 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.96□□□□□ -0.82
CUL3-216ENST00000617432 J3QL48 77 aa9.95□□□□□ -0.82
CUL3-216ENST00000617432 FCHSD2O94868 740 aa9.95□□□□□ -0.82
CUL3-216ENST00000617432 ARHGEF1Q92888 912 aaKnown RBP9.95□□□□□ -0.82
CUL3-216ENST00000617432 LORP23490 312 aaPredicted RBP9.94□□□□□ -0.82
CUL3-216ENST00000617432 MRGPRX2Q96LB1 330 aa9.94□□□□□ -0.82
CUL3-216ENST00000617432 NXF1Q9UBU9 619 aaKnown RBP9.94□□□□□ -0.82
CUL3-216ENST00000617432 SLC27A5Q9Y2P5 690 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms